BLASTX nr result

ID: Coptis21_contig00024528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024528
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537924.1| PREDICTED: uncharacterized protein LOC100819...   186   2e-45
ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253...   186   2e-45
ref|XP_003517535.1| PREDICTED: uncharacterized protein LOC100785...   185   4e-45
ref|XP_002518969.1| beta-1,3-n-acetylglucosaminyltransferase rad...   184   7e-45
ref|NP_174595.1| fringe-related protein [Arabidopsis thaliana] g...   178   5e-43

>ref|XP_003537924.1| PREDICTED: uncharacterized protein LOC100819814 [Glycine max]
          Length = 545

 Score =  186 bits (472), Expect = 2e-45
 Identities = 90/114 (78%), Positives = 100/114 (87%)
 Frame = -2

Query: 344 LPPIMVSEDISRFRYTNPTGHPSGLRISRIVPECFCLGLPNVRWFVLCDDDTIFNPDILV 165
           LPPIM+SED S FRYTNP GHPSGLRISRIV E FCLGL +VRWFVLCDDDTIFN + LV
Sbjct: 181 LPPIMISEDTSYFRYTNPVGHPSGLRISRIVRESFCLGLSDVRWFVLCDDDTIFNVNNLV 240

Query: 164 NVLNKYDSSEMVYIGSQFESHSANTYFSHSMAFGSGGIAICYPLAQAISKIQDE 3
           +VL+KY+SSEM+YIGS  ESHSANTYFSHSMAFG  GIAI YPLA+A+S+I DE
Sbjct: 241 DVLSKYNSSEMIYIGSPSESHSANTYFSHSMAFGGSGIAISYPLAKALSEILDE 294


>ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253017 [Vitis vinifera]
          Length = 533

 Score =  186 bits (471), Expect = 2e-45
 Identities = 93/121 (76%), Positives = 102/121 (84%)
 Frame = -2

Query: 368 APSWALSTLPPIMVSEDISRFRYTNPTGHPSGLRISRIVPECFCLGLPNVRWFVLCDDDT 189
           +P     +LP IMVSEDISRFRYTNPTGHPSGLRISRI+ E F LGLP+VRWFVL DDDT
Sbjct: 161 SPEEGDDSLPAIMVSEDISRFRYTNPTGHPSGLRISRILSESFRLGLPDVRWFVLGDDDT 220

Query: 188 IFNPDILVNVLNKYDSSEMVYIGSQFESHSANTYFSHSMAFGSGGIAICYPLAQAISKIQ 9
           IFN D LV VLNKYD SEMVYIG   ESHSAN+YFS+SMAFG GGIAI +PLA+A+SKIQ
Sbjct: 221 IFNADNLVTVLNKYDPSEMVYIGGPSESHSANSYFSYSMAFGGGGIAISHPLAEALSKIQ 280

Query: 8   D 6
           D
Sbjct: 281 D 281


>ref|XP_003517535.1| PREDICTED: uncharacterized protein LOC100785910 [Glycine max]
          Length = 545

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/114 (78%), Positives = 101/114 (88%)
 Frame = -2

Query: 344 LPPIMVSEDISRFRYTNPTGHPSGLRISRIVPECFCLGLPNVRWFVLCDDDTIFNPDILV 165
           LPPIM+SEDIS FRYTNP GHPSGLRISRIV E FCLGL +VRWFVLCDDDTIFN + LV
Sbjct: 181 LPPIMISEDISYFRYTNPIGHPSGLRISRIVRESFCLGLSDVRWFVLCDDDTIFNVNNLV 240

Query: 164 NVLNKYDSSEMVYIGSQFESHSANTYFSHSMAFGSGGIAICYPLAQAISKIQDE 3
           +VL+KY+SSEM+YIGS  ESHSANTYFSHSMAFG GGIAI + LA+A+S+I DE
Sbjct: 241 DVLSKYNSSEMIYIGSPSESHSANTYFSHSMAFGGGGIAISHSLAKALSEILDE 294


>ref|XP_002518969.1| beta-1,3-n-acetylglucosaminyltransferase radical fringe, putative
           [Ricinus communis] gi|223541956|gb|EEF43502.1|
           beta-1,3-n-acetylglucosaminyltransferase radical fringe,
           putative [Ricinus communis]
          Length = 538

 Score =  184 bits (467), Expect = 7e-45
 Identities = 90/115 (78%), Positives = 100/115 (86%)
 Frame = -2

Query: 347 TLPPIMVSEDISRFRYTNPTGHPSGLRISRIVPECFCLGLPNVRWFVLCDDDTIFNPDIL 168
           +LP IM+SED SRFRYTNPTGHPSGLRISRIV E F LGLP+VRWFVL DDDTIFN D L
Sbjct: 170 SLPQIMISEDTSRFRYTNPTGHPSGLRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNL 229

Query: 167 VNVLNKYDSSEMVYIGSQFESHSANTYFSHSMAFGSGGIAICYPLAQAISKIQDE 3
           V VL+KYDSSEMVY+G+  ESHSANTYFSHSMA+G GGIAI YPLA+A+S I D+
Sbjct: 230 VGVLSKYDSSEMVYVGAPSESHSANTYFSHSMAYGGGGIAISYPLAEALSNILDD 284


>ref|NP_174595.1| fringe-related protein [Arabidopsis thaliana]
           gi|12322571|gb|AAG51285.1|AC027035_8 unknown protein
           [Arabidopsis thaliana] gi|332193453|gb|AEE31574.1|
           fringe-related protein [Arabidopsis thaliana]
          Length = 548

 Score =  178 bits (451), Expect = 5e-43
 Identities = 88/122 (72%), Positives = 100/122 (81%)
 Frame = -2

Query: 368 APSWALSTLPPIMVSEDISRFRYTNPTGHPSGLRISRIVPECFCLGLPNVRWFVLCDDDT 189
           +P     +LPPI+VSED SRFRYTNPTGHPSGLRISRI  E F L LPNVRWFVL DDDT
Sbjct: 172 SPEEGDDSLPPIIVSEDSSRFRYTNPTGHPSGLRISRIAMESFRLSLPNVRWFVLGDDDT 231

Query: 188 IFNPDILVNVLNKYDSSEMVYIGSQFESHSANTYFSHSMAFGSGGIAICYPLAQAISKIQ 9
           IFN   L+ VL+KYD SEMVYIG+  ESHSAN+YFSH+MAFG GGIAI YPLA+A+S+I 
Sbjct: 232 IFNVHNLLAVLSKYDPSEMVYIGNPSESHSANSYFSHNMAFGGGGIAISYPLAEALSRIH 291

Query: 8   DE 3
           D+
Sbjct: 292 DD 293


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