BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024526
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515948.1| pentatricopeptide repeat-containing protein,...   379   e-103
ref|XP_003594555.1| Pentatricopeptide repeat-containing protein ...   366   3e-99
ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containi...   364   1e-98
emb|CBI36037.3| unnamed protein product [Vitis vinifera]              364   1e-98
ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containi...   363   3e-98

>ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544853|gb|EEF46368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 706

 Score =  379 bits (974), Expect = e-103
 Identities = 178/216 (82%), Positives = 203/216 (93%)
 Frame = -1

Query: 822 KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVE 643
           KGI+T+T+MYN VF+ALG+ K +SHL+DLYEKMK +GPLPDIFTYNILISS+GRAG V E
Sbjct: 278 KGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYE 337

Query: 642 AVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIE 463
           A+K+FEE+ENS+CKPDIISYNSLINCLGKNGDLDEAH+RF+EMQE GLNPDV+TYSTLIE
Sbjct: 338 AIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIE 397

Query: 462 CFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTP 283
           CFGKT +VEMAC LFDEMLAEGCFPNIVTYNILLDCLER G++ EA++LYAKLKQQGLTP
Sbjct: 398 CFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 457

Query: 282 DKITYTVLERLQSGSQRKVRIRRQNPITGWVVSPLR 175
           D ITY+VLERLQSGS RK+R+RR+NPITGWVVSPLR
Sbjct: 458 DSITYSVLERLQSGSHRKLRVRRKNPITGWVVSPLR 493



 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
 Frame = -1

Query: 822 KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVE 643
           KG + +   +NM+  AL K + V     ++E MK     PD +TY I+I   GR G + E
Sbjct: 71  KGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDE 130

Query: 642 AVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYS---T 472
           ++ LFEEM N  C P++I+YN++I  L  +  +D+  + F +M E    P+  TYS   T
Sbjct: 131 SLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILT 190

Query: 471 LIECFGKTSRVEMACTLFDEML--------------------AEGCFPNIVTYN------ 370
           L+   G+  +++    L  + +                    A   F N+ +Y+      
Sbjct: 191 LLAAEGQLHKLDKVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRD 250

Query: 369 ---ILLDCLERCGKSTEALELYAKLKQQGLTPDKITY----TVLERLQ 247
               +L+ L   GK+ EA++L  K+ ++G+  D I Y    T L RL+
Sbjct: 251 ACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLK 298



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 54/183 (29%), Positives = 92/183 (50%)
 Frame = -1

Query: 807 NTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVEAVKLF 628
           N  +Y  +   L K    S  H L+  M       D      ++ S   AG  VEA+ L 
Sbjct: 213 NRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLL 272

Query: 627 EEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIECFGKT 448
            ++       D I YN++   LG+   +   +  +++M+  G  PD+ TY+ LI  FG+ 
Sbjct: 273 GKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRA 332

Query: 447 SRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTPDKITY 268
            +V  A  +F+E+    C P+I++YN L++CL + G   EA   + +++++GL PD +TY
Sbjct: 333 GKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTY 392

Query: 267 TVL 259
           + L
Sbjct: 393 STL 395



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
 Frame = -1

Query: 738 LYEKMKCNGPLPDIFTYNILISSYGRAGNVVEAVKLFEEMENSNCKPDIISYNSLINCLG 559
           +Y +MK  G   DIF +N+L+ +  +   V +A K+FE+M+  +C+PD  +Y  +I   G
Sbjct: 64  VYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTG 123

Query: 558 KNGDLDEAHMRFKEMQEVGLNPDVITYSTLIECFGKTSRVEMACTLFDEMLAEGCFPNIV 379
           + G LDE+   F+EM   G +P++I Y+T+I+    +  V+    LF +M+ + C PN  
Sbjct: 124 RIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEF 183

Query: 378 TYNILLDCLERCG---KSTEALELYAKLKQQGL 289
           TY+++L  L   G   K  + +EL  K   + +
Sbjct: 184 TYSVILTLLAAEGQLHKLDKVVELSRKYMNRSI 216



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 50/189 (26%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
 Frame = -1

Query: 819 GISTNTVMYNMVFSALGKQKAVSHLHDLYEK--MKCNGPLPDIFTYNILISSYGRAGNVV 646
           G+       N++    G  + +     L EK  +K NG     +TY  L+ +Y R+ +  
Sbjct: 5   GVRGTISTVNILIGFFGDGEDLERCIGLIEKWDLKMNG-----YTYKCLVQAYLRSCDSD 59

Query: 645 EAVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLI 466
              +++ EM+      DI ++N L++ L K+  +D+A   F++M++    PD  TY+ +I
Sbjct: 60  NGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMI 119

Query: 465 ECFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLT 286
              G+  +++ +  LF+EML +GC PN++ YN ++  L       + + L++K+ ++   
Sbjct: 120 RMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCR 179

Query: 285 PDKITYTVL 259
           P++ TY+V+
Sbjct: 180 PNEFTYSVI 188



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 35/223 (15%)
 Frame = -1

Query: 822 KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVE 643
           KG S N + YN +  AL   + V     L+ KM      P+ FTY+++++     G + +
Sbjct: 141 KGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLHK 200

Query: 642 AVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEM----------------- 514
             K+ E +        I +Y  L+  L K G   EAH  F  M                 
Sbjct: 201 LDKVVE-LSRKYMNRSIYAY--LVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSMLE 257

Query: 513 ------------------QEVGLNPDVITYSTLIECFGKTSRVEMACTLFDEMLAEGCFP 388
                              E G+N D I Y+T+    G+  ++     L+++M  +G  P
Sbjct: 258 SLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLP 317

Query: 387 NIVTYNILLDCLERCGKSTEALELYAKLKQQGLTPDKITYTVL 259
           +I TYNIL+    R GK  EA++++ +L+     PD I+Y  L
Sbjct: 318 DIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSL 360



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 43/164 (26%), Positives = 81/164 (49%)
 Frame = -1

Query: 726 MKCNGPLPDIFTYNILISSYGRAGNVVEAVKLFEEMENSNCKPDIISYNSLINCLGKNGD 547
           M  NG    I T NILI  +G   ++   + L E+ +    K +  +Y  L+    ++ D
Sbjct: 1   MDKNGVRGTISTVNILIGFFGDGEDLERCIGLIEKWD---LKMNGYTYKCLVQAYLRSCD 57

Query: 546 LDEAHMRFKEMQEVGLNPDVITYSTLIECFGKTSRVEMACTLFDEMLAEGCFPNIVTYNI 367
            D     + EM+  G   D+  ++ L++   K  +V+ A  +F++M  + C P+  TY I
Sbjct: 58  SDNGFRVYLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTI 117

Query: 366 LLDCLERCGKSTEALELYAKLKQQGLTPDKITYTVLERLQSGSQ 235
           ++    R GK  E+L L+ ++  +G +P+ I Y  + +  + S+
Sbjct: 118 MIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMIQALANSR 161


>ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355483603|gb|AES64806.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  366 bits (940), Expect = 3e-99
 Identities = 173/216 (80%), Positives = 197/216 (91%)
 Frame = -1

Query: 822  KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVE 643
            K I+T+T+MYN VF+ALG+ K VSH+HDLYEKMK +GP PDIFTYNILISSYGRAG V  
Sbjct: 424  KCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDS 483

Query: 642  AVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIE 463
            AVK+FEE+ENSNC+PD+ISYNSLINCLGKNGD+DEAHMRFKEMQE GLNPDV+TYSTLIE
Sbjct: 484  AVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIE 543

Query: 462  CFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTP 283
            CFGKT +VEMAC+LFDEM+AEGC PN+VTYNILLDCLER G++ EA++LYAKLKQQGLTP
Sbjct: 544  CFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 603

Query: 282  DKITYTVLERLQSGSQRKVRIRRQNPITGWVVSPLR 175
            D ITY VLERLQSG   K+R+RRQNPITGWVVSPL+
Sbjct: 604  DSITYAVLERLQSGRHGKLRVRRQNPITGWVVSPLQ 639



 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 67/255 (26%)
 Frame = -1

Query: 822  KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILIS---------- 673
            KG + N + YN +  AL K +       L+ KM  NG  P+ FTY++L++          
Sbjct: 287  KGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNK 346

Query: 672  ----------------------SYGRAGNVVEAVKLFEEMENSNCKPD------------ 595
                                  +  + G+  EA +LF  M N + K D            
Sbjct: 347  LDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLC 406

Query: 594  -----------------------IISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVI 484
                                    I YN++   LG+   +   H  +++M++ G  PD+ 
Sbjct: 407  SSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIF 466

Query: 483  TYSTLIECFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKL 304
            TY+ LI  +G+  RV+ A  +F+E+    C P++++YN L++CL + G   EA   + ++
Sbjct: 467  TYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEM 526

Query: 303  KQQGLTPDKITYTVL 259
            +++GL PD +TY+ L
Sbjct: 527  QEKGLNPDVVTYSTL 541



 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 50/156 (32%), Positives = 80/156 (51%)
 Frame = -1

Query: 819 GISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVEA 640
           G+  N   Y  +     + +       +Y  M   G   DIF +N+L+ +  +   V +A
Sbjct: 183 GLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKA 242

Query: 639 VKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIEC 460
            K+FE+M+  +C+PD  +Y  +I   GK G  DE+   F+ M E G   ++I Y+T+IE 
Sbjct: 243 YKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEA 302

Query: 459 FGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCL 352
             K    + A  LF +M+  GC PN  TY++LL+ L
Sbjct: 303 LAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVL 338



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 41/146 (28%), Positives = 82/146 (56%)
 Frame = -1

Query: 696 FTYNILISSYGRAGNVVEAVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKE 517
           ++Y  L+  Y R  +  +A  ++ +M       DI ++N L++ L K+  +D+A+  F++
Sbjct: 189 YSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFED 248

Query: 516 MQEVGLNPDVITYSTLIECFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGK 337
           M+     PD  TY+ +I   GK  + + +  LF  ML +G   N++ YN +++ L +   
Sbjct: 249 MKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRM 308

Query: 336 STEALELYAKLKQQGLTPDKITYTVL 259
           + +A+ L++K+ + G  P++ TY+VL
Sbjct: 309 ADKAVLLFSKMVENGCQPNEFTYSVL 334



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 61/254 (24%), Positives = 94/254 (37%), Gaps = 67/254 (26%)
 Frame = -1

Query: 819 GISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVE- 643
           G S +   +NM+  AL K + V   + ++E MK     PD FTY I+I   G+AG   E 
Sbjct: 218 GYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDES 277

Query: 642 ----------------------------------AVKLFEEMENSNCKPDIISYNSLINC 565
                                             AV LF +M  + C+P+  +Y+ L+N 
Sbjct: 278 LALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNV 337

Query: 564 LGKNGDLD--------------------------------EAHMRFKEMQEVGLNPDVIT 481
           L   G L+                                EAH  F  M  V    D   
Sbjct: 338 LVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDA 397

Query: 480 YSTLIECFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLK 301
           Y +++E    + ++  A  L +    +    + + YN +   L R  + +   +LY K+K
Sbjct: 398 YMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMK 457

Query: 300 QQGLTPDKITYTVL 259
           Q G  PD  TY +L
Sbjct: 458 QDGPPPDIFTYNIL 471



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
 Frame = -1

Query: 702 DIFTYNILISSYGRAGNVV---EAVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAH 532
           D F YN L  +  R+ + +   +   L ++ME    K  I + N LI   G  GDLD   
Sbjct: 120 DPFIYNRLFLTLSRSSSQLRFEQTESLLDDMEKRGVKGSISTVNILI---GFFGDLDRCV 176

Query: 531 MRFKEMQEVGLNPDVITYSTLIECFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCL 352
              K+    GL  +  +Y  L++ + +    + A  ++ +ML  G   +I  +N+LLD L
Sbjct: 177 GLVKKW---GLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDAL 233

Query: 351 ERCGKSTEALELYAKLKQQGLTPDKITYTVLERL 250
            +  K  +A +++  +K++   PD  TYT++ R+
Sbjct: 234 AKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRM 267


>ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Vitis vinifera]
          Length = 990

 Score =  364 bits (934), Expect = 1e-98
 Identities = 176/216 (81%), Positives = 196/216 (90%)
 Frame = -1

Query: 822 KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVE 643
           K IST+TVMYN V SALGK K  S LHDLYEKMK +GP PDIF+YNILISS+GRAG V E
Sbjct: 278 KRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEE 337

Query: 642 AVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIE 463
           AVK+FEE+ENS+CKPDIIS+NSLINCLGKNGD+DEAHMRFKEM+E GL+PDV+TYSTLIE
Sbjct: 338 AVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIE 397

Query: 462 CFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTP 283
           CFGKT +VEMAC LFDEMLAEGC PNIVTYNILLDCLER G++ EA++LYAKLKQQGLTP
Sbjct: 398 CFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 457

Query: 282 DKITYTVLERLQSGSQRKVRIRRQNPITGWVVSPLR 175
           D ITY VLERLQSGS +KVR+RR+NPITGWVVSPLR
Sbjct: 458 DSITYAVLERLQSGSHQKVRVRRKNPITGWVVSPLR 493



 Score =  106 bits (265), Expect = 5e-21
 Identities = 55/183 (30%), Positives = 98/183 (53%)
 Frame = -1

Query: 807 NTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVEAVKLF 628
           N  +Y  +   L K    S  H L+  M       D   Y  ++ S   AG   EA+ L 
Sbjct: 213 NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLL 272

Query: 627 EEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIECFGKT 448
            ++       D + YN++++ LGK     + H  +++M++ G +PD+ +Y+ LI  FG+ 
Sbjct: 273 SKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRA 332

Query: 447 SRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTPDKITY 268
            RVE A  +F+E+    C P+I+++N L++CL + G   EA   + +++++GL+PD +TY
Sbjct: 333 GRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTY 392

Query: 267 TVL 259
           + L
Sbjct: 393 STL 395



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 50/187 (26%), Positives = 95/187 (50%)
 Frame = -1

Query: 819 GISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVEA 640
           G+  +    N++    G    V    DL +K        + +TY  L+ ++ R+ N  +A
Sbjct: 5   GVRGSISTINILIGIFGGGADVERCFDLVKKWDLQ---MNCYTYKCLLQAHLRSNNSNKA 61

Query: 639 VKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIEC 460
            +++ E+     K DI +YN L++ L K+  +D+ +M FK+M+     PD  TY+ +I  
Sbjct: 62  FEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRM 121

Query: 459 FGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTPD 280
            GK  + + + TLF EM  +G  PN++ YN ++  L       + + L++K+ +    P+
Sbjct: 122 TGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPN 181

Query: 279 KITYTVL 259
             T++V+
Sbjct: 182 GFTFSVI 188



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
 Frame = -1

Query: 816 ISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVEAV 637
           +  N   Y  +  A  +    +   ++Y +++  G   DIF YN+L+ +  +   V +  
Sbjct: 38  LQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVY 97

Query: 636 KLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIECF 457
            +F++M+  +C+PD  +Y  +I   GK G  DE+   F+EM E G  P++I Y+T+I+  
Sbjct: 98  MVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQAL 157

Query: 456 GKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCL---ERCGKSTEALELYAKLKQQGL 289
                V+    LF +M+   C PN  T++++L+ L    + G+  E +E+  K   + +
Sbjct: 158 ANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSI 216



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
 Frame = -1

Query: 822 KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVE 643
           +G   +   YNM+  AL K   V  ++ +++ MK     PD +TY I+I   G+ G   E
Sbjct: 71  RGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADE 130

Query: 642 AVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIE 463
           ++ LF+EM      P++I+YN++I  L  N  +D+    F +M E    P+  T+S ++ 
Sbjct: 131 SLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILN 190

Query: 462 CF---GKTSRVEMACTLFDEMLAEGCFPNIV----------------------------- 379
                G+  R++    + ++ + +  +  +V                             
Sbjct: 191 VLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRD 250

Query: 378 TYNILLDCLERCGKSTEALELYAKLKQQGLTPDKITY-TVLERL 250
            Y  +L+ L   GK+TEAL+L +K+ ++ ++ D + Y TVL  L
Sbjct: 251 AYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSAL 294



 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 3/191 (1%)
 Frame = -1

Query: 822 KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILIS---SYGRAGN 652
           KG + N + YN +  AL   + V     L+ KM  N   P+ FT++++++   + G+ G 
Sbjct: 141 KGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGR 200

Query: 651 VVEAVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYST 472
           + E V++  +  N +       Y  L+  L K G   EAH  F  M       D   Y +
Sbjct: 201 LDEVVEVSNKFMNKSI------YAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMS 254

Query: 471 LIECFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQG 292
           ++E      +   A  L  ++  +    + V YN +L  L +  K+++  +LY K+KQ G
Sbjct: 255 MLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDG 314

Query: 291 LTPDKITYTVL 259
            +PD  +Y +L
Sbjct: 315 PSPDIFSYNIL 325


>emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  364 bits (934), Expect = 1e-98
 Identities = 176/216 (81%), Positives = 196/216 (90%)
 Frame = -1

Query: 822  KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVE 643
            K IST+TVMYN V SALGK K  S LHDLYEKMK +GP PDIF+YNILISS+GRAG V E
Sbjct: 431  KRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEE 490

Query: 642  AVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIE 463
            AVK+FEE+ENS+CKPDIIS+NSLINCLGKNGD+DEAHMRFKEM+E GL+PDV+TYSTLIE
Sbjct: 491  AVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIE 550

Query: 462  CFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTP 283
            CFGKT +VEMAC LFDEMLAEGC PNIVTYNILLDCLER G++ EA++LYAKLKQQGLTP
Sbjct: 551  CFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 610

Query: 282  DKITYTVLERLQSGSQRKVRIRRQNPITGWVVSPLR 175
            D ITY VLERLQSGS +KVR+RR+NPITGWVVSPLR
Sbjct: 611  DSITYAVLERLQSGSHQKVRVRRKNPITGWVVSPLR 646



 Score =  106 bits (265), Expect = 5e-21
 Identities = 55/183 (30%), Positives = 98/183 (53%)
 Frame = -1

Query: 807 NTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVEAVKLF 628
           N  +Y  +   L K    S  H L+  M       D   Y  ++ S   AG   EA+ L 
Sbjct: 366 NKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLL 425

Query: 627 EEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIECFGKT 448
            ++       D + YN++++ LGK     + H  +++M++ G +PD+ +Y+ LI  FG+ 
Sbjct: 426 SKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRA 485

Query: 447 SRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTPDKITY 268
            RVE A  +F+E+    C P+I+++N L++CL + G   EA   + +++++GL+PD +TY
Sbjct: 486 GRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTY 545

Query: 267 TVL 259
           + L
Sbjct: 546 STL 548



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
 Frame = -1

Query: 822 KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVE 643
           +G   +   YNM+  AL K   V  ++ +++ MK     PD +TY I+I   G+ G   E
Sbjct: 254 RGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADE 313

Query: 642 AVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEM-QEVG---LNPDVITYS 475
           ++ LF+EM      P++I+YN++I  L  N  +D+    F +M  EV    +N  +  Y+
Sbjct: 314 SLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSI--YA 371

Query: 474 TLIECFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQ 295
            L+    K      A  LF  M +     +   Y  +L+ L   GK+TEAL+L +K+ ++
Sbjct: 372 YLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEK 431

Query: 294 GLTPDKITY-TVLERL 250
            ++ D + Y TVL  L
Sbjct: 432 RISTDTVMYNTVLSAL 447



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 47/172 (27%), Positives = 87/172 (50%)
 Frame = -1

Query: 819 GISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVEA 640
           G+  +    N++    G    V    DL +K        + +TY  L+ ++ R+ N  +A
Sbjct: 188 GVRGSISTINILIGIFGGGADVERCFDLVKKWDLQ---MNCYTYKCLLQAHLRSNNSNKA 244

Query: 639 VKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIEC 460
            +++ E+     K DI +YN L++ L K+  +D+ +M FK+M+     PD  TY+ +I  
Sbjct: 245 FEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRM 304

Query: 459 FGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKL 304
            GK  + + + TLF EM  +G  PN++ YN ++  L       + + L++K+
Sbjct: 305 TGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKM 356



 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
 Frame = -1

Query: 816 ISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVEAV 637
           +  N   Y  +  A  +    +   ++Y +++  G   DIF YN+L+ +  +   V +  
Sbjct: 221 LQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVY 280

Query: 636 KLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIECF 457
            +F++M+  +C+PD  +Y  +I   GK G  DE+   F+EM E G  P++I Y+T+I+  
Sbjct: 281 MVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQAL 340

Query: 456 GKTSRVEMACTLFDEMLAE--GCFPNIVTYNILLDCLERCGKSTEALELYAKL 304
                V+    LF +M+ E    F N   Y  L+  L + G ++EA  L+  +
Sbjct: 341 ANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNM 393



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
 Frame = -1

Query: 807 NTVMYNMVFSALGKQKAVSH------LHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVV 646
           N+  YN +   L K  A+        +  + + M+  G    I T NILI  +G   +V 
Sbjct: 151 NSFTYNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGSISTINILIGIFGGGADVE 210

Query: 645 EAVKLFEEME-NSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTL 469
               L ++ +   NC     +Y  L+    ++ + ++A   + E++  G   D+  Y+ L
Sbjct: 211 RCFDLVKKWDLQMNC----YTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNML 266

Query: 468 IECFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGL 289
           ++   K ++V+    +F +M  + C P+  TY I++    + GK+ E+L L+ ++ ++G 
Sbjct: 267 LDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGY 326

Query: 288 TPDKITYTVL 259
           TP+ I Y  +
Sbjct: 327 TPNLIAYNTM 336



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
 Frame = -1

Query: 762 KAVSHLHDLYEKMK-CNGPLPDI----FTYNILISSYGRAGNVVEAVKL------FEEME 616
           K ++H H   E  + C+  +P      FTYN L+    +   + ++ +L       ++ME
Sbjct: 126 KCLNHPHLSLEFFRFCSSNIPKFQHNSFTYNRLLVILSKPSALRDSERLDLIRAILDDME 185

Query: 615 NSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIECFGKTSRVE 436
               +  I + N LI   G   D++     F  +++  L  +  TY  L++   +++   
Sbjct: 186 RCGVRGSISTINILIGIFGGGADVERC---FDLVKKWDLQMNCYTYKCLLQAHLRSNNSN 242

Query: 435 MACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTPDKITYTVLE 256
            A  ++ E+   G   +I  YN+LLD L +  K  +   ++  +K++   PD+ TYT++ 
Sbjct: 243 KAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMI 302

Query: 255 RL 250
           R+
Sbjct: 303 RM 304


>ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
            mitochondrial-like [Glycine max]
          Length = 647

 Score =  363 bits (931), Expect = 3e-98
 Identities = 172/216 (79%), Positives = 194/216 (89%)
 Frame = -1

Query: 822  KGISTNTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVE 643
            KGI+T+T+MYN VF+ALG+ K +SH+HDLYEKMK +GP PDIFTYNILISS+GRAG V  
Sbjct: 432  KGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDI 491

Query: 642  AVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIE 463
            AVK FEE+ENS+CKPD+ISYNSLINCLGKNGD+DEAHMRFKEMQE GLNPDV+TYSTLIE
Sbjct: 492  AVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIE 551

Query: 462  CFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTP 283
            CFGKT +VEMAC LFDEMLAE C PN++TYNILLDCLER G++ EA++LYAKLKQQGLTP
Sbjct: 552  CFGKTDKVEMACRLFDEMLAEECTPNLITYNILLDCLERSGRTAEAVDLYAKLKQQGLTP 611

Query: 282  DKITYTVLERLQSGSQRKVRIRRQNPITGWVVSPLR 175
            D ITY VLERLQSG   K+R RRQNPITGWVVSPLR
Sbjct: 612  DSITYAVLERLQSGGHGKLRFRRQNPITGWVVSPLR 647



 Score =  101 bits (251), Expect = 2e-19
 Identities = 54/183 (29%), Positives = 93/183 (50%)
 Frame = -1

Query: 807 NTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVEAVKLF 628
           N  +Y      L K    S  H L+  M       D      ++ S   AG + EA+ L 
Sbjct: 367 NKQIYAYFVRTLSKVGHASEAHRLFCNMWNFHDKGDKDACMSMLESLCSAGKMTEAIDLL 426

Query: 627 EEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIECFGKT 448
            ++       D I YN++   LG+   +   H  +++M++ G  PD+ TY+ LI  FG+ 
Sbjct: 427 NKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILISSFGRA 486

Query: 447 SRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGKSTEALELYAKLKQQGLTPDKITY 268
            RV++A   F+E+    C P++++YN L++CL + G   EA   + +++++GL PD +TY
Sbjct: 487 GRVDIAVKFFEELENSDCKPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTY 546

Query: 267 TVL 259
           + L
Sbjct: 547 STL 549



 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 47/149 (31%), Positives = 88/149 (59%)
 Frame = -1

Query: 696 FTYNILISSYGRAGNVVEAVKLFEEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKE 517
           +TY  L+ +Y RA +   A +++ +M     + DI  YN L++ L K+  +  ++  F++
Sbjct: 198 YTYKCLLQAYLRALDSSTAFRVYLDMIRHGYRLDIFGYNMLLDALAKDEKVC-SYKVFED 256

Query: 516 MQEVGLNPDVITYSTLIECFGKTSRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGK 337
           M+     PDV TY+ +I   GK+S+ + A  LF  MLA+GC PN++ YN +++ L +   
Sbjct: 257 MKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKGRM 316

Query: 336 STEALELYAKLKQQGLTPDKITYTVLERL 250
             +A+ L++K+ +  + P++ TY+V+  L
Sbjct: 317 VDKAVLLFSKMVENDIQPNEFTYSVILNL 345



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 51/157 (32%), Positives = 81/157 (51%)
 Frame = -1

Query: 807 NTVMYNMVFSALGKQKAVSHLHDLYEKMKCNGPLPDIFTYNILISSYGRAGNVVEAVKLF 628
           N   Y  +  A  +    S    +Y  M  +G   DIF YN+L+ +  +   V  + K+F
Sbjct: 196 NAYTYKCLLQAYLRALDSSTAFRVYLDMIRHGYRLDIFGYNMLLDALAKDEKVC-SYKVF 254

Query: 627 EEMENSNCKPDIISYNSLINCLGKNGDLDEAHMRFKEMQEVGLNPDVITYSTLIECFGKT 448
           E+M+  +C+PD+ +Y  +I   GK+   DEA   F+ M   G  P++I Y+T+IE   K 
Sbjct: 255 EDMKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAKG 314

Query: 447 SRVEMACTLFDEMLAEGCFPNIVTYNILLDCLERCGK 337
             V+ A  LF +M+     PN  TY+++L+ L   GK
Sbjct: 315 RMVDKAVLLFSKMVENDIQPNEFTYSVILNLLVAEGK 351