BLASTX nr result
ID: Coptis21_contig00024521
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024521 (738 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273491.1| PREDICTED: germin-like protein 9-3 [Vitis vi... 68 2e-09 ref|XP_002273554.1| PREDICTED: germin-like protein 9-3 [Vitis vi... 64 2e-08 emb|CAN61171.1| hypothetical protein VITISV_005677 [Vitis vinifera] 62 9e-08 ref|XP_002273453.1| PREDICTED: germin-like protein 9-3 [Vitis vi... 57 4e-06 ref|XP_002310989.1| predicted protein [Populus trichocarpa] gi|2... 56 9e-06 >ref|XP_002273491.1| PREDICTED: germin-like protein 9-3 [Vitis vinifera] Length = 208 Score = 67.8 bits (164), Expect = 2e-09 Identities = 28/49 (57%), Positives = 38/49 (77%) Frame = +2 Query: 566 MLFLVVALTTYYVAHAGDVDIVSDFIIPANSSAVDGKFFTYTGMRGIFD 712 + F + T ++A A D DI+SDFI+PANS+A+DG FFT+TGMRG+FD Sbjct: 10 LFFTIGVFATSWIAQASDPDILSDFIVPANSNAIDGSFFTFTGMRGVFD 58 >ref|XP_002273554.1| PREDICTED: germin-like protein 9-3 [Vitis vinifera] Length = 208 Score = 64.3 bits (155), Expect = 2e-08 Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%) Frame = +2 Query: 560 KPMLFLVVAL-TTYYVAHAGDVDIVSDFIIPANSSAVDGKFFTYTGMRGIFD 712 K +LF VA+ T ++A A D DI+SDFI PANS+A++G FFT+TGMRG+ D Sbjct: 7 KHLLFFTVAVFATSWIAQASDPDILSDFIFPANSNAINGSFFTFTGMRGVLD 58 >emb|CAN61171.1| hypothetical protein VITISV_005677 [Vitis vinifera] Length = 208 Score = 62.4 bits (150), Expect = 9e-08 Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%) Frame = +2 Query: 560 KPMLFLVVAL-TTYYVAHAGDVDIVSDFIIPANSSAVDGKFFTYTGMRGIFD 712 K +LF VA+ T ++A A D DI+SDFI PA+S+A++G FFT+TGMRG+ D Sbjct: 7 KHLLFFTVAVFATSWIAQASDPDILSDFIFPADSNAINGSFFTFTGMRGVLD 58 >ref|XP_002273453.1| PREDICTED: germin-like protein 9-3 [Vitis vinifera] gi|296084889|emb|CBI28298.3| unnamed protein product [Vitis vinifera] Length = 208 Score = 57.0 bits (136), Expect = 4e-06 Identities = 27/44 (61%), Positives = 32/44 (72%) Frame = +2 Query: 575 LVVALTTYYVAHAGDVDIVSDFIIPANSSAVDGKFFTYTGMRGI 706 LV + +A AGD DIVSDFIIP N SAVDG FFT+TG+R + Sbjct: 13 LVASFAIVQIAIAGDPDIVSDFIIPPNMSAVDGNFFTFTGIRAL 56 >ref|XP_002310989.1| predicted protein [Populus trichocarpa] gi|222850809|gb|EEE88356.1| predicted protein [Populus trichocarpa] Length = 205 Score = 55.8 bits (133), Expect = 9e-06 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 3/58 (5%) Frame = +2 Query: 542 MDLNFHKPM---LFLVVALTTYYVAHAGDVDIVSDFIIPANSSAVDGKFFTYTGMRGI 706 M +N KP+ LFL+ AL T A A D DI+SDFI P N+S VDGKFFT+TGMRG+ Sbjct: 1 MAMNSLKPISSFLFLL-ALVTAKTALASDPDILSDFIAPTNTS-VDGKFFTFTGMRGV 56