BLASTX nr result

ID: Coptis21_contig00024521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024521
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273491.1| PREDICTED: germin-like protein 9-3 [Vitis vi...    68   2e-09
ref|XP_002273554.1| PREDICTED: germin-like protein 9-3 [Vitis vi...    64   2e-08
emb|CAN61171.1| hypothetical protein VITISV_005677 [Vitis vinifera]    62   9e-08
ref|XP_002273453.1| PREDICTED: germin-like protein 9-3 [Vitis vi...    57   4e-06
ref|XP_002310989.1| predicted protein [Populus trichocarpa] gi|2...    56   9e-06

>ref|XP_002273491.1| PREDICTED: germin-like protein 9-3 [Vitis vinifera]
          Length = 208

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = +2

Query: 566 MLFLVVALTTYYVAHAGDVDIVSDFIIPANSSAVDGKFFTYTGMRGIFD 712
           + F +    T ++A A D DI+SDFI+PANS+A+DG FFT+TGMRG+FD
Sbjct: 10  LFFTIGVFATSWIAQASDPDILSDFIVPANSNAIDGSFFTFTGMRGVFD 58


>ref|XP_002273554.1| PREDICTED: germin-like protein 9-3 [Vitis vinifera]
          Length = 208

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/52 (57%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +2

Query: 560 KPMLFLVVAL-TTYYVAHAGDVDIVSDFIIPANSSAVDGKFFTYTGMRGIFD 712
           K +LF  VA+  T ++A A D DI+SDFI PANS+A++G FFT+TGMRG+ D
Sbjct: 7   KHLLFFTVAVFATSWIAQASDPDILSDFIFPANSNAINGSFFTFTGMRGVLD 58


>emb|CAN61171.1| hypothetical protein VITISV_005677 [Vitis vinifera]
          Length = 208

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +2

Query: 560 KPMLFLVVAL-TTYYVAHAGDVDIVSDFIIPANSSAVDGKFFTYTGMRGIFD 712
           K +LF  VA+  T ++A A D DI+SDFI PA+S+A++G FFT+TGMRG+ D
Sbjct: 7   KHLLFFTVAVFATSWIAQASDPDILSDFIFPADSNAINGSFFTFTGMRGVLD 58


>ref|XP_002273453.1| PREDICTED: germin-like protein 9-3 [Vitis vinifera]
           gi|296084889|emb|CBI28298.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = +2

Query: 575 LVVALTTYYVAHAGDVDIVSDFIIPANSSAVDGKFFTYTGMRGI 706
           LV +     +A AGD DIVSDFIIP N SAVDG FFT+TG+R +
Sbjct: 13  LVASFAIVQIAIAGDPDIVSDFIIPPNMSAVDGNFFTFTGIRAL 56


>ref|XP_002310989.1| predicted protein [Populus trichocarpa] gi|222850809|gb|EEE88356.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
 Frame = +2

Query: 542 MDLNFHKPM---LFLVVALTTYYVAHAGDVDIVSDFIIPANSSAVDGKFFTYTGMRGI 706
           M +N  KP+   LFL+ AL T   A A D DI+SDFI P N+S VDGKFFT+TGMRG+
Sbjct: 1   MAMNSLKPISSFLFLL-ALVTAKTALASDPDILSDFIAPTNTS-VDGKFFTFTGMRGV 56


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