BLASTX nr result

ID: Coptis21_contig00024512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024512
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACP30565.1| disease resistance protein [Brassica rapa subsp. ...   131   1e-28
ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichoca...   128   9e-28
ref|XP_002279982.2| PREDICTED: disease resistance protein At4g27...   127   2e-27
emb|CBI20504.3| unnamed protein product [Vitis vinifera]              127   2e-27
ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichoca...   125   8e-27

>gb|ACP30565.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1009

 Score =  131 bits (329), Expect = 1e-28
 Identities = 92/229 (40%), Positives = 134/229 (58%), Gaps = 5/229 (2%)
 Frame = +2

Query: 5    FIPEGQDIIKDIGDGFYILRELQDANMLETFTKEGDEWLKMHDLFRDLAIKIMN---EEP 175
            FI E Q+    +  G  ++  L+D+ +LE  +  GD  +KMHD+ RD AI +M+   ++ 
Sbjct: 428  FIDETQNYSYLMNQGITLVENLKDSCLLEEGS-HGDT-VKMHDVVRDFAIWVMSSSQDDS 485

Query: 176  GFLVKAGLGLQSSYSSEWKDS-RKISLIRNQIKTLDVFPVSCPNVSTILLHDNPISHISP 352
              LV +G+GL      ++  S R++SL+ N++K L    V C  +ST+LL  N      P
Sbjct: 486  HSLVMSGIGLCEFPHEKFVPSIRRVSLMNNKLKRLSNQVVECVELSTLLLQGNFHLKELP 545

Query: 353  SSFTRVL-ALQFLDMSYSWITELPPSLSELAQLRVLFLQYCTRLEKIPSLEKLKKLQVLS 529
              F     AL+ L++S + I  LP SL++L +LR L L+    LE++PSLE L K+Q+L 
Sbjct: 546  EGFLISFPALRILNLSGTCIRSLPNSLNKLHELRSLILRDYYYLEEVPSLEGLAKIQILD 605

Query: 530  LCGTSITELPQGMEGLVSLKSLDMSETTKLESIPVGMISSLCRLEELRM 676
            LC T I E P+G+E L SL+ LD+S T  LESIP G+I  L  LE L M
Sbjct: 606  LCATRIRETPRGLETLNSLRLLDLSRTHHLESIPEGIIGQLSSLEVLDM 654


>ref|XP_002333022.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834654|gb|EEE73117.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 674

 Score =  128 bits (322), Expect = 9e-28
 Identities = 84/214 (39%), Positives = 128/214 (59%), Gaps = 5/214 (2%)
 Frame = +2

Query: 38   IGDGFYILRELQDANMLETFTKEGD-EWLKMHDLFRDLAIKIMNEEPGFLVKAGLGLQS- 211
            I +G  +L  L+   +LE     GD   +KMHDL RD+AI+I+ E    +VKAG  L+  
Sbjct: 373  IDEGHTMLSRLESVCLLEGIKWYGDYRCVKMHDLIRDMAIQILQENSQGMVKAGARLREV 432

Query: 212  SYSSEWKDS-RKISLIRNQIKTL-DVFPVSCPNVSTILL-HDNPISHISPSSFTRVLALQ 382
              + EW ++  ++SL+RN IK +       CP++S +LL  ++ +  I+ S F ++  L+
Sbjct: 433  PGAEEWTENLTRVSLMRNHIKEIPSSHSPRCPSLSILLLCRNSELQFIANSFFKQLHGLK 492

Query: 383  FLDMSYSWITELPPSLSELAQLRVLFLQYCTRLEKIPSLEKLKKLQVLSLCGTSITELPQ 562
             LD+SY+ IT+LP S+SEL  L  L L  C  L  +PSLEKL+ L+ L L GT++ ++PQ
Sbjct: 493  VLDLSYTGITKLPDSVSELVSLTTLLLIDCKMLRHVPSLEKLRALKRLDLSGTALEKIPQ 552

Query: 563  GMEGLVSLKSLDMSETTKLESIPVGMISSLCRLE 664
            GME L +LK L M+   + E  P G++  L  L+
Sbjct: 553  GMECLYNLKYLRMNGCGEKE-FPSGLLPKLSHLQ 585


>ref|XP_002279982.2| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 1030

 Score =  127 bits (320), Expect = 2e-27
 Identities = 87/217 (40%), Positives = 128/217 (58%), Gaps = 7/217 (3%)
 Frame = +2

Query: 47  GFYILRELQDANMLETFTKEGDEWLKMHDLFRDLAIKI---MNEEPGFLVKAGLGLQSSY 217
           GF ++  L+D  +LE  +++ D  +KMHD+ RD+AI I   + +E   LV++G+GL  S 
Sbjct: 349 GFALVENLKDCCLLEHGSRK-DTTVKMHDVVRDVAIWIASSLEDECKSLVQSGIGL--SK 405

Query: 218 SSEWKDSR---KISLIRNQIKTLDVFPVSCPNVSTILLHDNPISHISPSSFTRVL-ALQF 385
            SE+K +R   +IS + NQI  L    ++CP  S +LL  N      P  F R   AL+ 
Sbjct: 406 ISEYKFTRSLKRISFMNNQISWLPDCGINCPEASALLLQGNTPLEKVPEGFLRGFPALKV 465

Query: 386 LDMSYSWITELPPSLSELAQLRVLFLQYCTRLEKIPSLEKLKKLQVLSLCGTSITELPQG 565
           L++S + I  LP SL  L +LR L L+ C+ LE++P +  L +LQVL    T+I ELP+G
Sbjct: 466 LNLSGTRIQRLPLSLVHLGELRALLLRNCSFLEELPPVGGLSRLQVLDCASTNIKELPEG 525

Query: 566 MEGLVSLKSLDMSETTKLESIPVGMISSLCRLEELRM 676
           ME L  L+ L +S T +L +I  G++S L  LE L M
Sbjct: 526 MEQLSYLRELHLSRTKQLTTIQAGVLSGLSSLEVLDM 562


>emb|CBI20504.3| unnamed protein product [Vitis vinifera]
          Length = 1011

 Score =  127 bits (320), Expect = 2e-27
 Identities = 87/217 (40%), Positives = 128/217 (58%), Gaps = 7/217 (3%)
 Frame = +2

Query: 47  GFYILRELQDANMLETFTKEGDEWLKMHDLFRDLAIKI---MNEEPGFLVKAGLGLQSSY 217
           GF ++  L+D  +LE  +++ D  +KMHD+ RD+AI I   + +E   LV++G+GL  S 
Sbjct: 349 GFALVENLKDCCLLEHGSRK-DTTVKMHDVVRDVAIWIASSLEDECKSLVQSGIGL--SK 405

Query: 218 SSEWKDSR---KISLIRNQIKTLDVFPVSCPNVSTILLHDNPISHISPSSFTRVL-ALQF 385
            SE+K +R   +IS + NQI  L    ++CP  S +LL  N      P  F R   AL+ 
Sbjct: 406 ISEYKFTRSLKRISFMNNQISWLPDCGINCPEASALLLQGNTPLEKVPEGFLRGFPALKV 465

Query: 386 LDMSYSWITELPPSLSELAQLRVLFLQYCTRLEKIPSLEKLKKLQVLSLCGTSITELPQG 565
           L++S + I  LP SL  L +LR L L+ C+ LE++P +  L +LQVL    T+I ELP+G
Sbjct: 466 LNLSGTRIQRLPLSLVHLGELRALLLRNCSFLEELPPVGGLSRLQVLDCASTNIKELPEG 525

Query: 566 MEGLVSLKSLDMSETTKLESIPVGMISSLCRLEELRM 676
           ME L  L+ L +S T +L +I  G++S L  LE L M
Sbjct: 526 MEQLSYLRELHLSRTKQLTTIQAGVLSGLSSLEVLDM 562


>ref|XP_002325713.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862588|gb|EEF00095.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 929

 Score =  125 bits (314), Expect = 8e-27
 Identities = 85/215 (39%), Positives = 129/215 (60%), Gaps = 5/215 (2%)
 Frame = +2

Query: 35  DIGDGFYILRELQDANMLETFTKEGDEWLKMHDLFRDLAIKIMNEEPGFLVKAGLGLQS- 211
           +   G  IL +L+   +LE+  +EG  ++KMHDL RD+AI+I+ E    +VKAG  L+  
Sbjct: 332 EFNKGHSILNKLERVCLLES-AEEG--YVKMHDLIRDMAIQILQENSQGMVKAGAQLREL 388

Query: 212 SYSSEWKDS-RKISLIRNQIKTL-DVFPVSCPNVSTILLHDNP-ISHISPSSFTRVLALQ 382
               EW +   ++SL+ NQIK +       CP++ST+LL  N  +  I+ S F ++  L+
Sbjct: 389 PGEEEWTEHLMRVSLMHNQIKEIPSSHSPRCPSLSTLLLRGNSELQFIADSFFEQLRGLK 448

Query: 383 FLDMSYSWITELPPSLSELAQLRVLFLQYCTRLEKIPSLEKLKKLQVLSLCGT-SITELP 559
            LD+SY+ IT+LP S+SEL  L  L L  C  L  +PSLEKL+ L+ L L GT ++ ++P
Sbjct: 449 VLDLSYTGITKLPDSVSELVSLTALLLIDCKMLRHVPSLEKLRALKRLDLSGTRALEKIP 508

Query: 560 QGMEGLVSLKSLDMSETTKLESIPVGMISSLCRLE 664
           QGME L +L+ L M+   + E  P G++  L  L+
Sbjct: 509 QGMECLCNLRYLRMNGCGEKE-FPSGLLPKLSHLQ 542


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