BLASTX nr result

ID: Coptis21_contig00024506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024506
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis...   229   6e-58
ref|XP_002279158.1| PREDICTED: zinc finger protein 7-like [Vitis...   222   1e-55
emb|CAN77233.1| hypothetical protein VITISV_001090 [Vitis vinifera]   222   1e-55
ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|2...   210   5e-52
ref|XP_002313159.1| predicted protein [Populus trichocarpa] gi|2...   203   6e-50

>ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]
          Length = 189

 Score =  229 bits (585), Expect = 6e-58
 Identities = 112/182 (61%), Positives = 138/182 (75%)
 Frame = -1

Query: 914 MIFQKEEEPNKMSANSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSTSK 735
           MIF  E    + S N    G +  ++ D    E+N  EWL+LSLGRN P  A DSD  S+
Sbjct: 1   MIFHGEGA--ETSVNKQQGGLRISENGDEGAEEDNPGEWLNLSLGRNLPSTALDSDPQSR 58

Query: 734 PTSNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQRMVAMMGLPLNTPIVRSL 555
           PTS+K+FSCNFCMRKF+SSQALGGHQNAHKRERGA RRYQS RM+AMMGLP+NTPI RSL
Sbjct: 59  PTSSKVFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQSHRMMAMMGLPMNTPI-RSL 117

Query: 554 GIQAHSLIHKPSKEGTGMVARFDDSNSRFGTAWSPFTIEEAMDMMWPGSFHVNPQESKQQ 375
           G++ HSL+ KP+++GT +VARFDDSN+ FG  W+PFT+EE MD+MWPGS+ +  Q S+Q 
Sbjct: 118 GVRPHSLVQKPNRDGTAIVARFDDSNTGFGMTWTPFTLEETMDVMWPGSYRLEQQPSEQT 177

Query: 374 PE 369
            E
Sbjct: 178 SE 179


>ref|XP_002279158.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]
          Length = 193

 Score =  222 bits (566), Expect = 1e-55
 Identities = 108/184 (58%), Positives = 133/184 (72%), Gaps = 3/184 (1%)
 Frame = -1

Query: 917 LMIFQKEEEPNKMSANSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSTS 738
           + I Q+EEE N++S+N+    SK+   D+    ++N  EWL LSL RN+    GD D  S
Sbjct: 1   MTISQREEEANEVSSNNQDAESKTRSDDEKTSGDDNLGEWLSLSLSRNEAFTTGDGDPQS 60

Query: 737 KPTSNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQR-MVAMMGLPLNTPIVR 561
           KP  NKIFSCNFCMRKFFSSQALGGHQNAHKRERGA +RYQS R M+A MG PLN+  +R
Sbjct: 61  KPAGNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSHRMMMATMGFPLNSLTIR 120

Query: 560 SLGIQAHSLIHKPSKEGTGMVARFDDSNSRFGTAWSPFTIEEAMDMMWPGSFHVN--PQE 387
           SLG Q HSL HKP +EGT + ARF+D N+ F  AW+PF +EEAMD +WPGSFHV+  P +
Sbjct: 121 SLGAQPHSLAHKPGREGTEVAARFNDPNTGFRMAWTPFVMEEAMDSIWPGSFHVDKLPSQ 180

Query: 386 SKQQ 375
           +  Q
Sbjct: 181 ASDQ 184


>emb|CAN77233.1| hypothetical protein VITISV_001090 [Vitis vinifera]
          Length = 248

 Score =  222 bits (566), Expect = 1e-55
 Identities = 108/184 (58%), Positives = 133/184 (72%), Gaps = 3/184 (1%)
 Frame = -1

Query: 917 LMIFQKEEEPNKMSANSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSTS 738
           + I Q+EEE N++S+N+    SK+   D+    ++N  EWL LSL RN+    GD D  S
Sbjct: 1   MTISQREEEANEVSSNNQDAESKTRSDDEKTSGDDNLGEWLSLSLSRNEAFTTGDGDPQS 60

Query: 737 KPTSNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQR-MVAMMGLPLNTPIVR 561
           KP  NKIFSCNFCMRKFFSSQALGGHQNAHKRERGA +RYQS R M+A MG PLN+  +R
Sbjct: 61  KPAGNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSHRMMMATMGFPLNSLTIR 120

Query: 560 SLGIQAHSLIHKPSKEGTGMVARFDDSNSRFGTAWSPFTIEEAMDMMWPGSFHVN--PQE 387
           SLG Q HSL HKP +EGT + ARF+D N+ F  AW+PF +EEAMD +WPGSFHV+  P +
Sbjct: 121 SLGAQPHSLAHKPGREGTEVAARFNDPNTGFRMAWTPFVMEEAMDSIWPGSFHVDKLPSQ 180

Query: 386 SKQQ 375
           +  Q
Sbjct: 181 ASDQ 184


>ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|222846015|gb|EEE83562.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  210 bits (534), Expect = 5e-52
 Identities = 99/185 (53%), Positives = 133/185 (71%), Gaps = 4/185 (2%)
 Frame = -1

Query: 914 MIFQKE--EEPNKMSANSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDST 741
           MIFQ+E  E       N     + S +  D    +NN  EWL+LSLG N P  AGD DS 
Sbjct: 57  MIFQEEAIEIKTLKHQNEMLNSNNSNEGYD----DNNPGEWLNLSLGGNSPSTAGDYDSQ 112

Query: 740 SKPTSNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQRMVAMMGLPLNTPIVR 561
           S+PTS+K+FSCNFC RKFFSSQALGGHQNAHKRERGA RRY SQRM+ +MGLP+N+P+ R
Sbjct: 113 SRPTSSKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYHSQRMMTIMGLPVNSPMAR 172

Query: 560 SLGIQAHSLIHKPSKEGTGMVARFDDSNSRFGTAWSPFTIEEAMDMMWPGSFHVNPQ--E 387
           SLG++ H+L+HKP+++GT +  RF++++  F  +W PFT+++  D+ WPGSF ++PQ  E
Sbjct: 173 SLGVRPHTLVHKPNRDGTAIAGRFNEASPGFDMSWMPFTVDDTTDLTWPGSFRLDPQPPE 232

Query: 386 SKQQP 372
           +  +P
Sbjct: 233 TSSEP 237


>ref|XP_002313159.1| predicted protein [Populus trichocarpa] gi|222849567|gb|EEE87114.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  203 bits (516), Expect = 6e-50
 Identities = 94/175 (53%), Positives = 126/175 (72%)
 Frame = -1

Query: 914 MIFQKEEEPNKMSANSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSTSK 735
           MIFQ+E    K S +          ++    ++NN  EWL+L LG N P  AGD DS S+
Sbjct: 1   MIFQEEAIEIKTSKHQNEIVGNHNSNEGY--NDNNPGEWLNLRLGGNSPSTAGDYDSQSR 58

Query: 734 PTSNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQRMVAMMGLPLNTPIVRSL 555
           PTS+K+FSCNFC RKFFSSQALGGHQNAHKRERGA RRY SQRM+ MMGLP+N+P+ RSL
Sbjct: 59  PTSSKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYHSQRMMTMMGLPINSPMARSL 118

Query: 554 GIQAHSLIHKPSKEGTGMVARFDDSNSRFGTAWSPFTIEEAMDMMWPGSFHVNPQ 390
           G++ H+L+HKP+++GT +  RF+++N  F  +W PF +++  D+ WPGSF ++ Q
Sbjct: 119 GVRPHALVHKPTRDGTPIGGRFNEANPGFVMSWMPFALDDTADLTWPGSFRLDSQ 173


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