BLASTX nr result

ID: Coptis21_contig00024335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024335
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300994.1| predicted protein [Populus trichocarpa] gi|2...   506   e-141
gb|AEK05508.1| peptidoglycan-binding LysM domain-containing prot...   496   e-138
ref|XP_002513796.1| LysM domain GPI-anchored protein 1 precursor...   496   e-138
ref|XP_002285848.1| PREDICTED: lysM domain-containing GPI-anchor...   494   e-137
ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchor...   490   e-136

>ref|XP_002300994.1| predicted protein [Populus trichocarpa] gi|222842720|gb|EEE80267.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  506 bits (1302), Expect = e-141
 Identities = 248/330 (75%), Positives = 279/330 (84%)
 Frame = +3

Query: 9   LTATTLVHSKSTIEPCSNSDTCNAMLGYTLYTDLKVSEVAALFQVDPVSLLTTNAIDISY 188
           + A  LV SKSTIEPC+NSD+CNA+L YTLYTDLKVSEVA+LFQ+DP++LLTTNAIDISY
Sbjct: 14  INAVALVTSKSTIEPCTNSDSCNALLAYTLYTDLKVSEVASLFQIDPIALLTTNAIDISY 73

Query: 189 PDVENHILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLASIAGLVFSGLVSADQIR 368
           PDVENHILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTL+SIA  +++GLVSADQI+
Sbjct: 74  PDVENHILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLSSIADSIYAGLVSADQIK 133

Query: 369 DANSISDPNVLDVGMSLVVPLPCTCFNSTDNFMPAVYLSYLVMPMDSLSGIAASYSTXXX 548
           +ANSI DP+VLDVG SLVVPLPCTCFN TDN +PA+YLSY+V  +D+L+ IAA Y T   
Sbjct: 134 EANSIDDPSVLDVGQSLVVPLPCTCFNGTDNSLPAIYLSYVVKEVDTLAAIAARYET--- 190

Query: 549 XXXXXXXXXXXXXXXXXXXXXXTVSDLMNVNAMGTTSVNAGDILAVPLPACASNFPRYSA 728
                                 T++DLMNVNAMG+ ++ AGDILAVPLPACAS FPRY++
Sbjct: 191 ----------------------TLTDLMNVNAMGSAAIKAGDILAVPLPACASKFPRYAS 228

Query: 729 DFGLNVANGSYAITASHCVQCSCGPGNLNLYCTPASLAVSCSSMQCRNSNLMLGNVTAQP 908
           DFGL V NGSYAI+ASHCVQCSCGPGNLNLYC PASLAVSCSSMQCRNSNLMLGNVT Q 
Sbjct: 229 DFGLIVPNGSYAISASHCVQCSCGPGNLNLYCMPASLAVSCSSMQCRNSNLMLGNVTVQQ 288

Query: 909 SAAGCNVTSCTYGGYVNGTILTTLSTSLQP 998
           S+AGCNVTSC YGGYVNGTI+TTLST LQP
Sbjct: 289 SSAGCNVTSCNYGGYVNGTIMTTLSTYLQP 318


>gb|AEK05508.1| peptidoglycan-binding LysM domain-containing protein [Dimocarpus
           longan]
          Length = 326

 Score =  496 bits (1277), Expect = e-138
 Identities = 242/324 (74%), Positives = 277/324 (85%)
 Frame = +3

Query: 27  VHSKSTIEPCSNSDTCNAMLGYTLYTDLKVSEVAALFQVDPVSLLTTNAIDISYPDVENH 206
           V +KSTIEPCSNSD+CNA+LGYTLYTDLKVSEV++LF VDPVS+LT NAIDISYPDVENH
Sbjct: 17  VGAKSTIEPCSNSDSCNALLGYTLYTDLKVSEVSSLFNVDPVSILTANAIDISYPDVENH 76

Query: 207 ILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLASIAGLVFSGLVSADQIRDANSIS 386
           ILPSQLFLKIPI+C+CVDGIRKSVSTHYKTRPSDTL SIA  ++SGLVSADQ+R+AN+I 
Sbjct: 77  ILPSQLFLKIPISCACVDGIRKSVSTHYKTRPSDTLTSIAAQIYSGLVSADQLREANAIQ 136

Query: 387 DPNVLDVGMSLVVPLPCTCFNSTDNFMPAVYLSYLVMPMDSLSGIAASYSTXXXXXXXXX 566
           DP+VLDVG SL+VPLPCTCFN TDN +PAVYLSY+V  +D+L+GIAA+Y T         
Sbjct: 137 DPDVLDVGASLIVPLPCTCFNGTDNLLPAVYLSYVVKDIDTLAGIAATYRT--------- 187

Query: 567 XXXXXXXXXXXXXXXXTVSDLMNVNAMGTTSVNAGDILAVPLPACASNFPRYSADFGLNV 746
                           T++DLM VNAMG+ ++ AGDILAVPLPACASNFPRY++D GL V
Sbjct: 188 ----------------TLTDLMTVNAMGSPAIKAGDILAVPLPACASNFPRYASDRGLIV 231

Query: 747 ANGSYAITASHCVQCSCGPGNLNLYCTPASLAVSCSSMQCRNSNLMLGNVTAQPSAAGCN 926
            NGSYAITASHCVQCSCGPGNLNLYC PASLAVSCSSMQC+NSNLMLGNVT Q S+AGCN
Sbjct: 232 PNGSYAITASHCVQCSCGPGNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTVQQSSAGCN 291

Query: 927 VTSCTYGGYVNGTILTTLSTSLQP 998
           VT+C+YGG+VNGTI+T+LSTSLQP
Sbjct: 292 VTTCSYGGFVNGTIITSLSTSLQP 315


>ref|XP_002513796.1| LysM domain GPI-anchored protein 1 precursor, putative [Ricinus
           communis] gi|223546882|gb|EEF48379.1| LysM domain
           GPI-anchored protein 1 precursor, putative [Ricinus
           communis]
          Length = 410

 Score =  496 bits (1276), Expect = e-138
 Identities = 243/330 (73%), Positives = 276/330 (83%)
 Frame = +3

Query: 9   LTATTLVHSKSTIEPCSNSDTCNAMLGYTLYTDLKVSEVAALFQVDPVSLLTTNAIDISY 188
           +     V SKSTIEPCSN+D+CNA+LGYTLYTDLKVSEVA+LFQ+DP++LLT N+IDISY
Sbjct: 14  INVLAFVTSKSTIEPCSNNDSCNALLGYTLYTDLKVSEVASLFQIDPIALLTANSIDISY 73

Query: 189 PDVENHILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLASIAGLVFSGLVSADQIR 368
           PDVENHILPSQLFLKIPI CSCVDGIRKSVSTHYKTRPSDTLASIA  ++SGLVSADQI+
Sbjct: 74  PDVENHILPSQLFLKIPIICSCVDGIRKSVSTHYKTRPSDTLASIADSIYSGLVSADQIK 133

Query: 369 DANSISDPNVLDVGMSLVVPLPCTCFNSTDNFMPAVYLSYLVMPMDSLSGIAASYSTXXX 548
           +ANSI DP+VLDVG SLVVPLPCTCFN TDN +PA+YLSY+V  +D+L+GIA+ YST   
Sbjct: 134 EANSIQDPSVLDVGQSLVVPLPCTCFNGTDNLLPAIYLSYVVKDVDTLAGIASRYST--- 190

Query: 549 XXXXXXXXXXXXXXXXXXXXXXTVSDLMNVNAMGTTSVNAGDILAVPLPACASNFPRYSA 728
                                 T++DLMNVNAMG  S+ A DILAVPLPACAS FPRY++
Sbjct: 191 ----------------------TITDLMNVNAMGNPSIKADDILAVPLPACASKFPRYAS 228

Query: 729 DFGLNVANGSYAITASHCVQCSCGPGNLNLYCTPASLAVSCSSMQCRNSNLMLGNVTAQP 908
           D+GL V NGSYAI+ASHCVQCSCGPGNL+LYC PASLAVSCSSMQCRNSNLM+GNVT Q 
Sbjct: 229 DYGLIVPNGSYAISASHCVQCSCGPGNLDLYCMPASLAVSCSSMQCRNSNLMVGNVTWQR 288

Query: 909 SAAGCNVTSCTYGGYVNGTILTTLSTSLQP 998
           S+AGCNVTSC YGGYVNG+I+T LSTSLQP
Sbjct: 289 SSAGCNVTSCNYGGYVNGSIVTILSTSLQP 318


>ref|XP_002285848.1| PREDICTED: lysM domain-containing GPI-anchored protein 1 [Vitis
           vinifera]
          Length = 418

 Score =  494 bits (1273), Expect = e-137
 Identities = 242/330 (73%), Positives = 278/330 (84%)
 Frame = +3

Query: 9   LTATTLVHSKSTIEPCSNSDTCNAMLGYTLYTDLKVSEVAALFQVDPVSLLTTNAIDISY 188
           L+   +V SKSTIEPCSNSD+CNAM+GYTLYTDLKVSEVA LFQVDP+++LT NAIDISY
Sbjct: 18  LSNVDVVRSKSTIEPCSNSDSCNAMVGYTLYTDLKVSEVATLFQVDPIAILTANAIDISY 77

Query: 189 PDVENHILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLASIAGLVFSGLVSADQIR 368
           PDVENHILPSQLFLKIPI CSCVDGIRKSV+T YKTRPSDTL+SIA  +++GLVSADQ+R
Sbjct: 78  PDVENHILPSQLFLKIPIYCSCVDGIRKSVTTRYKTRPSDTLSSIADSIYAGLVSADQLR 137

Query: 369 DANSISDPNVLDVGMSLVVPLPCTCFNSTDNFMPAVYLSYLVMPMDSLSGIAASYSTXXX 548
           +ANSISDP+VLDVG +LVVPLPCTCFN TDN +PA YLSY+V   D+L+GIA+ YST   
Sbjct: 138 EANSISDPSVLDVGQTLVVPLPCTCFNGTDNLLPATYLSYVVKVDDTLTGIASRYST--- 194

Query: 549 XXXXXXXXXXXXXXXXXXXXXXTVSDLMNVNAMGTTSVNAGDILAVPLPACASNFPRYSA 728
                                 T+SDLM VNAMG+ ++ AGDILAVPLPACASNFP+Y++
Sbjct: 195 ----------------------TISDLMTVNAMGSPAIKAGDILAVPLPACASNFPKYAS 232

Query: 729 DFGLNVANGSYAITASHCVQCSCGPGNLNLYCTPASLAVSCSSMQCRNSNLMLGNVTAQP 908
           D+GL V NGSYAITASHCVQCSCGPG+LNLYC PASLAVSCSSMQCRN+NLMLGNVT Q 
Sbjct: 233 DYGLAVPNGSYAITASHCVQCSCGPGSLNLYCMPASLAVSCSSMQCRNTNLMLGNVTMQK 292

Query: 909 SAAGCNVTSCTYGGYVNGTILTTLSTSLQP 998
           S+AGCNVTSC+YGG+VNGTI+ TL+TSLQP
Sbjct: 293 SSAGCNVTSCSYGGFVNGTIIATLTTSLQP 322


>ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
           [Cucumis sativus] gi|449528597|ref|XP_004171290.1|
           PREDICTED: lysM domain-containing GPI-anchored protein
           1-like [Cucumis sativus]
          Length = 432

 Score =  490 bits (1262), Expect = e-136
 Identities = 238/330 (72%), Positives = 275/330 (83%)
 Frame = +3

Query: 9   LTATTLVHSKSTIEPCSNSDTCNAMLGYTLYTDLKVSEVAALFQVDPVSLLTTNAIDISY 188
           L     V +KSTIEPCSNSD+CNA+LGYTLYTDLKVSEV +LFQVDP+S+LT NAID+SY
Sbjct: 25  LVNVAFVSAKSTIEPCSNSDSCNALLGYTLYTDLKVSEVGSLFQVDPISILTANAIDVSY 84

Query: 189 PDVENHILPSQLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLASIAGLVFSGLVSADQIR 368
           PDVENHILPSQLF+KIPI+CSCVDGIRKSVST YKTRPSDTL+SIA  +++GLVS+DQIR
Sbjct: 85  PDVENHILPSQLFIKIPISCSCVDGIRKSVSTRYKTRPSDTLSSIADSIYAGLVSSDQIR 144

Query: 369 DANSISDPNVLDVGMSLVVPLPCTCFNSTDNFMPAVYLSYLVMPMDSLSGIAASYSTXXX 548
           +ANSISDP++LDVG +LVVPLPCTCFN TDN +PA+YLSY+V P D+L+GIA  YST   
Sbjct: 145 EANSISDPSLLDVGQTLVVPLPCTCFNGTDNSLPAIYLSYVVQPEDTLTGIAFRYST--- 201

Query: 549 XXXXXXXXXXXXXXXXXXXXXXTVSDLMNVNAMGTTSVNAGDILAVPLPACASNFPRYSA 728
                                 T++DLM+VNAMG  ++ AGDILAVPLPACAS FP Y++
Sbjct: 202 ----------------------TITDLMDVNAMGNPAIKAGDILAVPLPACASKFPSYAS 239

Query: 729 DFGLNVANGSYAITASHCVQCSCGPGNLNLYCTPASLAVSCSSMQCRNSNLMLGNVTAQP 908
           DFGL V NGSYAITASHCVQCSCGPGNLN+YC PA  AVSCSSMQC+NSNLMLGNVTAQ 
Sbjct: 240 DFGLIVPNGSYAITASHCVQCSCGPGNLNMYCMPAPFAVSCSSMQCKNSNLMLGNVTAQQ 299

Query: 909 SAAGCNVTSCTYGGYVNGTILTTLSTSLQP 998
           S+AGCNVTSC+YGG+VNGTILT LS++LQP
Sbjct: 300 SSAGCNVTSCSYGGFVNGTILTMLSSNLQP 329


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