BLASTX nr result

ID: Coptis21_contig00024245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024245
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82867.1| hypothetical protein VITISV_015468 [Vitis vinifera]    84   1e-14
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]               83   3e-14
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]      82   5e-14
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...    82   5e-14
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...    82   5e-14

>emb|CAN82867.1| hypothetical protein VITISV_015468 [Vitis vinifera]
          Length = 321

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/58 (65%), Positives = 43/58 (74%)
 Frame = +1

Query: 157 RGRQRCYVCRTAKGKHTNAGLYTPLPIPDKPWVDVSMDFVLGLPRSTHGKDFIFVVVD 330
           R   RC  CR AK +    GLYTPLP+P  PWVD+SMDFVLGLPRS +G+D IFVVVD
Sbjct: 172 RAYARCITCRQAKSRVLPHGLYTPLPVPSAPWVDISMDFVLGLPRSRNGRDSIFVVVD 229


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/68 (58%), Positives = 47/68 (69%)
 Frame = +1

Query: 127  HPPLRVRNQDRGRQRCYVCRTAKGKHTNAGLYTPLPIPDKPWVDVSMDFVLGLPRSTHGK 306
            H P   R+ +R  +RC  C+ AK K    GLYTPLPIP  PW D+SMDFV+GLPR+  GK
Sbjct: 1414 HWPHMKRDVERICERCPTCKQAKAKSQPHGLYTPLPIPSHPWNDISMDFVVGLPRTRTGK 1473

Query: 307  DFIFVVVD 330
            D IFVVVD
Sbjct: 1474 DSIFVVVD 1481


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/66 (59%), Positives = 44/66 (66%)
 Frame = +1

Query: 133  PLRVRNQDRGRQRCYVCRTAKGKHTNAGLYTPLPIPDKPWVDVSMDFVLGLPRSTHGKDF 312
            P   R+  R  QRC  C  AK K    GLYTPLP+P  PW D+SMDFVLGLPR+  G+D 
Sbjct: 1228 PKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDS 1287

Query: 313  IFVVVD 330
            IFVVVD
Sbjct: 1288 IFVVVD 1293


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
           gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
           Japonica Group]
          Length = 681

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/66 (59%), Positives = 44/66 (66%)
 Frame = +1

Query: 133 PLRVRNQDRGRQRCYVCRTAKGKHTNAGLYTPLPIPDKPWVDVSMDFVLGLPRSTHGKDF 312
           P   R+  R  QRC  C  AK K    GLYTPLP+P  PW D+SMDFVLGLPR+  G+D 
Sbjct: 196 PKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDS 255

Query: 313 IFVVVD 330
           IFVVVD
Sbjct: 256 IFVVVD 261


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/66 (59%), Positives = 44/66 (66%)
 Frame = +1

Query: 133 PLRVRNQDRGRQRCYVCRTAKGKHTNAGLYTPLPIPDKPWVDVSMDFVLGLPRSTHGKDF 312
           P   R+  R  QRC  C  AK K    GLYTPLP+P  PW D+SMDFVLGLPR+  G+D 
Sbjct: 196 PKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDS 255

Query: 313 IFVVVD 330
           IFVVVD
Sbjct: 256 IFVVVD 261


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