BLASTX nr result

ID: Coptis21_contig00024145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024145
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002319853.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3    LIGNGESTSLWYDPWHPTGIFAGKFDLAFLYDSMCNKRAKVSSFIEDGQWQIPRKFKIYY 182
            +IG+G +TSLW+D WHP    A  +   F+YDS   K AKV+  I++ +W+ P    I +
Sbjct: 767  IIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGW 826

Query: 183  PKLAQGIEEEVKIHTGE-DEVIWTVTNRGEYQMKDTYESIRQVRQ 314
              + + I        G+ DE+IW  +    + +K  +E +R+ RQ
Sbjct: 827  HPIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVAWEQLRRHRQ 871


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   LIGNGESTSLWYDPWHPTGIFAGKFDLAFLYDSMCNKRAKVSSFIEDGQWQIPRKFKIYY 182
           +IG+G +TSLW+D WHP    A  +   F+YDS   K AKV+  I++ +W+ P    I +
Sbjct: 234 IIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGW 293

Query: 183 PKLAQGIEEEVKIHTGE-DEVIWTVTNRGEYQMKDTYESIRQVRQ 314
             + + I        G+ DE++W  +    + +K  +E +R+ RQ
Sbjct: 294 HPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQ 338


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3    LIGNGESTSLWYDPWHPTGIFAGKFDLAFLYDSMCNKRAKVSSFIEDGQWQIPRKFKIYY 182
            +IG+G +TSLW+D WHP    A  +   F+YDS   K AKV+  I++ +W+ P    I +
Sbjct: 1107 IIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGW 1166

Query: 183  PKLAQGIEEEVKIHTGE-DEVIWTVTNRGEYQMKDTYESIRQVRQ 314
              + + I        G+ DE++W  +    + +K  +E +R+ RQ
Sbjct: 1167 HPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKVAWEHLRRHRQ 1211


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
 Frame = +3

Query: 3   LIGNGESTSLWYDPWHPTGIFAGKFDLAFLYDSMCNKRAKVSSFIEDGQWQIPRKFKIYY 182
           +IG+G +TSLW+D WHP    A  +   F+YDS   K AKV+  I++ +W+ P    I +
Sbjct: 52  IIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGW 111

Query: 183 PKLAQGIEEEVKIHTGE-DEVIWTVTNRGEYQMKDTYESIRQVR 311
             + + I        G+ DE++W  +    + +K  +E +R+ R
Sbjct: 112 HPIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVAWEQLRRHR 155


>ref|XP_002319853.1| predicted protein [Populus trichocarpa] gi|222858229|gb|EEE95776.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = +3

Query: 21  STSLWYDPWHPTGIFAGKFDLAFLYDSMCNKRAKVSSFIEDGQWQIPRKFKIYYPKLAQG 200
           +TSLW+D WHP    A  +   F+YDS   K A V+  I++ +W+ P    I +  + + 
Sbjct: 71  TTSLWFDNWHPHSPLADSYGERFIYDSGMAKNANVNVLIQNSKWKTPTTQAIGWHPIIEA 130

Query: 201 IEEEVKIHTGE-DEVIWTVTNRGEYQMKDTYESIRQVRQ 314
           I        G+ DE++W  +    + +K  +E +R+ RQ
Sbjct: 131 IPSNSNPKMGQKDEIVWLDSPNHRFSVKVAWEQLRRHRQ 169


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