BLASTX nr result

ID: Coptis21_contig00024016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024016
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565377.1| PREDICTED: uncharacterized protein LOC100833...   127   7e-28
emb|CBI25412.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002273969.1| PREDICTED: uncharacterized protein LOC100246...   123   2e-26
ref|XP_002455139.1| hypothetical protein SORBIDRAFT_03g004960 [S...   121   5e-26
gb|AFW80109.1| hypothetical protein ZEAMMB73_766737 [Zea mays]        119   3e-25

>ref|XP_003565377.1| PREDICTED: uncharacterized protein LOC100833476 [Brachypodium
           distachyon]
          Length = 688

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/98 (63%), Positives = 73/98 (74%)
 Frame = -2

Query: 371 MGAGRKTETHTLGEAIKHPPTVNSSAPAWNLKKKDLGGVIFGCTHYTINECLTNQIFGLP 192
           MGAGRKTET+            + S  A NLK+  L GVIFGCTH TINECL+ Q+FGLP
Sbjct: 1   MGAGRKTETYNAATPSNTRLHGDQSFSAHNLKEDKLAGVIFGCTHKTINECLSKQLFGLP 60

Query: 191 AIHFSYVKNIEPGLPLFLFNYSDRNLHGIYEAASHGSV 78
           A HF+YVKNI+PGLPLFLFNYSDR +HGI+EAA+ G +
Sbjct: 61  AGHFTYVKNIKPGLPLFLFNYSDRKMHGIFEAATSGQL 98


>emb|CBI25412.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/98 (63%), Positives = 69/98 (70%)
 Frame = -2

Query: 371 MGAGRKTETHTLGEAIKHPPTVNSSAPAWNLKKKDLGGVIFGCTHYTINECLTNQIFGLP 192
           MG GRK +     E      TVN S  A NL K DLGGVIFGC H TI+EC + Q+FGLP
Sbjct: 1   MGGGRKAKASRQKEKPLPSWTVNCSVTARNLGKSDLGGVIFGCKHNTIDECHSKQLFGLP 60

Query: 191 AIHFSYVKNIEPGLPLFLFNYSDRNLHGIYEAASHGSV 78
           A HFSYV+NI PGL LFLFNYSDR LHGI+EAAS G +
Sbjct: 61  AAHFSYVRNINPGLTLFLFNYSDRKLHGIFEAASPGQM 98


>ref|XP_002273969.1| PREDICTED: uncharacterized protein LOC100246676 [Vitis vinifera]
          Length = 818

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/98 (63%), Positives = 69/98 (70%)
 Frame = -2

Query: 371 MGAGRKTETHTLGEAIKHPPTVNSSAPAWNLKKKDLGGVIFGCTHYTINECLTNQIFGLP 192
           MG GRK +     E      TVN S  A NL K DLGGVIFGC H TI+EC + Q+FGLP
Sbjct: 1   MGGGRKAKASRQKEKPLPSWTVNCSVTARNLGKSDLGGVIFGCKHNTIDECHSKQLFGLP 60

Query: 191 AIHFSYVKNIEPGLPLFLFNYSDRNLHGIYEAASHGSV 78
           A HFSYV+NI PGL LFLFNYSDR LHGI+EAAS G +
Sbjct: 61  AAHFSYVRNINPGLTLFLFNYSDRKLHGIFEAASPGQM 98


>ref|XP_002455139.1| hypothetical protein SORBIDRAFT_03g004960 [Sorghum bicolor]
           gi|241927114|gb|EES00259.1| hypothetical protein
           SORBIDRAFT_03g004960 [Sorghum bicolor]
          Length = 687

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/106 (58%), Positives = 74/106 (69%), Gaps = 8/106 (7%)
 Frame = -2

Query: 371 MGAGRKTETHTLGEAIKHPPTVNS--------SAPAWNLKKKDLGGVIFGCTHYTINECL 216
           MGAGRKTET     A     T N         S  A NL++ +LGGVIFGC H T+NECL
Sbjct: 1   MGAGRKTETFYA--ATPSAQTQNQTNEWYGAFSVSARNLREDELGGVIFGCKHNTMNECL 58

Query: 215 TNQIFGLPAIHFSYVKNIEPGLPLFLFNYSDRNLHGIYEAASHGSV 78
           + Q+FGLP+ HFSYVKN++PG+PLFLFNYSDR +HGIYEAA  G +
Sbjct: 59  SKQLFGLPSSHFSYVKNVKPGMPLFLFNYSDRKMHGIYEAACAGKL 104


>gb|AFW80109.1| hypothetical protein ZEAMMB73_766737 [Zea mays]
          Length = 696

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 8/106 (7%)
 Frame = -2

Query: 371 MGAGRKTETHTLGEAIKHPPTVNSS--------APAWNLKKKDLGGVIFGCTHYTINECL 216
           MGAGRK ET     A     T N +          A NL++ +LGGVIFGC H TI ECL
Sbjct: 1   MGAGRKIETFFT--ATPSAQTQNQTNERYGTYPVAARNLREDELGGVIFGCKHNTIGECL 58

Query: 215 TNQIFGLPAIHFSYVKNIEPGLPLFLFNYSDRNLHGIYEAASHGSV 78
           + Q+FGLP+ HFSYVKN++PG+PLFLFNYSDR +HGIYEAAS G +
Sbjct: 59  SKQLFGLPSSHFSYVKNVKPGMPLFLFNYSDRKMHGIYEAASAGKL 104


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