BLASTX nr result
ID: Coptis21_contig00024009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00024009
(1105 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79019.1| hypothetical protein VITISV_043767 [Vitis vinifera] 82 3e-23
emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera] 76 7e-23
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera] 84 4e-22
emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera] 88 4e-22
emb|CAN65706.1| hypothetical protein VITISV_001745 [Vitis vinifera] 86 4e-22
>emb|CAN79019.1| hypothetical protein VITISV_043767 [Vitis vinifera]
Length = 1070
Score = 81.6 bits (200), Expect(3) = 3e-23
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Frame = -3
Query: 1001 LRRWRKTHLGAWDKVFSSKEEGGLDVQGLVTMAKALLGCWQWKYGVEDHSLLKMVI---- 834
+R +K HL +WD V SK +GGL+ + ALLG W W+Y E +L VI
Sbjct: 680 VRECKKDHLISWDVVCKSKAKGGLEFGKISLRNLALLGKWFWRYLRESSTLWHQVILSIY 739
Query: 833 -----EWWPNGVSQ-SHGCSVWKGVVAILPDFRRGISYKVGSGDKVHFWADTWTGGKPLC 672
W N + + SH C WK + + DF + + VG G+++HFW D W G +PL
Sbjct: 740 GTHSNGWDANTIVRWSHRCP-WKAIAQVFQDFSKYARFVVGDGERIHFWEDLWWGEQPLG 798
Query: 671 DRFP 660
++P
Sbjct: 799 SQYP 802
Score = 45.4 bits (106), Expect(3) = 3e-23
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = -2
Query: 591 MSWNLHFRRFSNDWELQQYTNLTST*PLLWIPFFLETRKILGGGASTFSSK-FFPVKSFY 415
+SWN +FRR +D E+++ +L + L + + +L + + SS F VKSF+
Sbjct: 825 LSWNFNFRRNLSDSEIEELKSLMRSFDCLHL-----SPSVLDETSWSLSSLGLFTVKSFF 879
Query: 414 GLLSKANRDDTAVVTEFPVNVVWNIEILLKVRFFCW 307
L+ ++ D + + FP N VWN ++ KV+ F W
Sbjct: 880 --LALSHPSDLSPI--FPTNFVWNFQVSFKVKSFIW 911
Score = 28.5 bits (62), Expect(3) = 3e-23
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 242 VCSICSFLNKSIEHLFIRYPFALELWSILLQ 150
+C +C +S +HLF+R + LW L Q
Sbjct: 937 ICKLCMKHGESADHLFLRCYLTMGLWHRLFQ 967
>emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]
Length = 1765
Score = 76.3 bits (186), Expect(4) = 7e-23
Identities = 43/120 (35%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Frame = -3
Query: 989 RKTHLGAWDKVFSSKEEGGLDVQGLVTMAKALLGCWQWKYGVEDHSLLKMVI-------- 834
++ HL +W+ V SK +GGL + + ALLG W W+Y E +L VI
Sbjct: 949 KRDHLVSWBVVCKSKMKGGLGLGRISLRNSALLGKWLWRYPREGSALWHQVILSIYGSHS 1008
Query: 833 -EWWPN-GVSQSHGCSVWKGVVAILPDFRRGISYKVGSGDKVHFWADTWTGGKPLCDRFP 660
W N V SH C WK + + DF + + VG GD++ FW D W G + L RFP
Sbjct: 1009 NGWDANTXVRWSHRCP-WKAIAQVFQDFSKFTRFIVGDGDRIRFWEDLWWGDQSLGVRFP 1067
Score = 47.0 bits (110), Expect(4) = 7e-23
Identities = 28/94 (29%), Positives = 50/94 (53%)
Frame = -2
Query: 588 SWNLHFRRFSNDWELQQYTNLTST*PLLWIPFFLETRKILGGGASTFSSKFFPVKSFYGL 409
SWN +FRR +D E+++ +L + + + + ++ S SS F VKSF+
Sbjct: 1091 SWNFNFRRNLSDSEIEKVESLMQSLDHIHLSPSVPDKR----SWSLSSSGLFTVKSFFLA 1146
Query: 408 LSKANRDDTAVVTEFPVNVVWNIEILLKVRFFCW 307
LS+ + + + FP +VWN ++ K++FF W
Sbjct: 1147 LSQIS----GLPSVFPTKLVWNSQVPFKIKFFVW 1176
Score = 27.7 bits (60), Expect(4) = 7e-23
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -3
Query: 242 VCSICSFLNKSIEHLFIRYPFALELWSILLQ 150
+C +C ++++HLF+ + LW L Q
Sbjct: 1202 ICMLCMERGETVDHLFLHCSMTMGLWHRLFQ 1232
Score = 23.1 bits (48), Expect(4) = 7e-23
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 1081 QKCSVKLSSYYVSILTLPVSVA 1016
Q C + Y++S+ +P SVA
Sbjct: 909 QSCLTHMPCYFLSLFKIPASVA 930
>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
Length = 4128
Score = 83.6 bits (205), Expect(3) = 4e-22
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Frame = -3
Query: 1103 KGARLILSKVFCQTIQLLCVNSYSSSK--CCKNHGVLRRW--------RKTHLGAWDKVF 954
KG RL L K ++ ++ + K C + + R + +K HL +W V
Sbjct: 3195 KGGRLTLLKSTLSSLPTYFLSLFVIPKRVCARLEKIQRDFLWGGGALEKKPHLVSWKVVC 3254
Query: 953 SSKEEGGLDVQGLVTMAKALLGCWQWKYGVEDHSLLKMVI---------EWWPNGVSQSH 801
+ K++GGL ++ L T KALLG W W++ E+ L K +I W +
Sbjct: 3255 ADKKKGGLGIRSLATFNKALLGKWLWRFANENEPLWKQIILSKYDLQEGGWCSKDARNWY 3314
Query: 800 GCSVWKGVVAILPDFRRGISYKVGSGDKVHFWADTWTGGKPLCDRFPLV 654
G VWK + +FR + +G G KV FW D W G + L + FP++
Sbjct: 3315 GVGVWKAIRKGWENFRSHSRFIIGDGTKVKFWKDLWCGNQSLKETFPIL 3363
Score = 40.0 bits (92), Expect(3) = 4e-22
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 5/99 (5%)
Frame = -2
Query: 588 SWNLHFRRFSNDWELQQYTNLTST*PLLWIPFFLETRKILGGGASTFSSK-----FFPVK 424
SW L F R NDWE+ + +L S L I G F K F VK
Sbjct: 3386 SWGLRFNRHLNDWEVGEVESLLSK---------LHPLTIRRGVEDMFRWKENKIGTFSVK 3436
Query: 423 SFYGLLSKANRDDTAVVTEFPVNVVWNIEILLKVRFFCW 307
SFY S+ ++ FP +W + ++ FF W
Sbjct: 3437 SFYSSFSRDSK------PPFPARTIWTPWVPIRASFFGW 3469
Score = 28.1 bits (61), Expect(3) = 4e-22
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -3
Query: 284 TENNLINIGMNISLVCSICSFLNKSIEHLFIRYPFALELWSILLQPLGVSF 132
T + L IG +I C +C ++ +HL + A LW ++ GV +
Sbjct: 3478 TTDRLKRIGWSIPNRCFLCKHKEETTDHLLLFCEKARMLWLLIFSLFGVQW 3528
Score = 80.9 bits (198), Expect = 5e-13
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Frame = -3
Query: 1103 KGARLILSKVFCQTIQLLCVNSYS-SSKCCKNHGVLRR---W------RKTHLGAWDKVF 954
KG RL L K ++ + ++ + K C ++R W +K HL W V
Sbjct: 1457 KGGRLTLIKSTLSSLPIYLMSLFVIPRKVCARIEKIQRDFLWGGGALEKKPHLVNWSAVC 1516
Query: 953 SSKEEGGLDVQGLVTMAKALLGCWQWKYGVEDHSLLKMVI---------EWWPNGVSQSH 801
+ +GGL ++ LV + +ALLG W WK+ +E +SL K VI W V ++
Sbjct: 1517 TDMRQGGLGIRSLVALNRALLGKWNWKFSIERNSLWKQVIIDKYGEEEGGWCSKEVRGAY 1576
Query: 800 GCSVWKGVVAILPDFRRGISYKVGSGDKVHFWADTWTGGKPLCDRFP 660
G +WK + R + VG+G KV FW D W + L D FP
Sbjct: 1577 GVGLWKAIRKDWEIIRSRSRFIVGNGRKVKFWKDLWCEDQALEDAFP 1623
>emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]
Length = 1937
Score = 88.2 bits (217), Expect(3) = 4e-22
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 9/120 (7%)
Frame = -3
Query: 986 KTHLGAWDKVFSSKEEGGLDVQGLVTMAKALLGCWQWKYGVEDHSLLKMVIE-------- 831
K HL +W + ++K++GGL ++ L T KALLG W W++ E+ SL K +I
Sbjct: 1564 KPHLVSWKAICATKKKGGLGIRSLSTFNKALLGKWLWRFANENESLWKQIISSKYDLQEG 1623
Query: 830 -WWPNGVSQSHGCSVWKGVVAILPDFRRGISYKVGSGDKVHFWADTWTGGKPLCDRFPLV 654
W GV +G VWK + +FR + +G G +V FW D W G + L + FP++
Sbjct: 1624 GWCSKGVRDRYGVGVWKAIRNGXENFRSHSRFIIGDGTRVKFWKDLWCGNQALEEAFPIL 1683
Score = 38.5 bits (88), Expect(3) = 4e-22
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
Frame = -2
Query: 588 SWNLHFRRFSNDWELQQYTNLTST*PLLWIPFFLETRKILGGGASTFSSK-----FFPVK 424
SW F R NDWE+ + +L L I G F K F VK
Sbjct: 1706 SWGPRFNRHLNDWEVGEVESLLCK---------LHPLTIRRGVEXLFRWKENKNGSFSVK 1756
Query: 423 SFYGLLSKANRDDTAVVTEFPVNVVWNIEILLKVRFFCW 307
SFY LLS+ + FP +W + ++ FF W
Sbjct: 1757 SFYSLLSRDTK------PPFPARTIWTPWVPIRASFFGW 1789
Score = 25.0 bits (53), Expect(3) = 4e-22
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = -3
Query: 284 TENNLINIGMNISLVCSICSFLNKSIEHLFIRYPFALELWSILLQPLGV 138
T + L G +I C +C ++ +HL + A LW ++ GV
Sbjct: 1798 TTDRLKRFGWSIPNRCFLCKQEEETTDHLLLFCEKARMLWLLIFSLFGV 1846
>emb|CAN65706.1| hypothetical protein VITISV_001745 [Vitis vinifera]
Length = 982
Score = 85.5 bits (210), Expect(3) = 4e-22
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Frame = -3
Query: 989 RKTHLGAWDKVFSSKEEGGLDVQGLVTMAKALLGCWQWKYGVEDHSLLKMVIE------- 831
RK HL WD V K +GGL V+ L + +ALL W W++ +E +L + VI
Sbjct: 487 RKPHLVNWDTVCMDKRKGGLGVRRLSILNRALLCKWNWRFAIERENLWRHVISRKFGEEE 546
Query: 830 --WWPNGVSQSHGCSVWKGVVAILPDFRRGISYKVGSGDKVHFWADTWTGGKPLCDRFP 660
W V +S+G WK + +R +++ VG+G +V FW D W G PLC+ FP
Sbjct: 547 GGWSSRDVRESYGVGFWKEIRKESALMQRKVAFLVGNGRRVKFWKDLWWGNVPLCNSFP 605
Score = 36.2 bits (82), Expect(3) = 4e-22
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = -2
Query: 585 WNLHFRRFSNDWELQQYTNLTST*PLLWIPFFLETRKILGGGASTFSSKFFPVKSFYGLL 406
W+ F R NDWE+++ L T + +E R + S+ F V+S Y L
Sbjct: 631 WSPRFSRPFNDWEVEEVERLLLTIRGARLSPLMEDRMMW----KVTSNGSFSVRSLYNDL 686
Query: 405 SKANRDDTAVVTEFPVNVVWNIEILLKVRFFCW 307
S FP ++WN + KV FF W
Sbjct: 687 SLRRTG------LFPHGLIWNPSVPSKVCFFAW 713
Score = 30.0 bits (66), Expect(3) = 4e-22
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -3
Query: 296 GHTPTENNLINIGMNISLVCSICSFLNKSIEHLFIRYPFALELWSILLQPLGV 138
G T + L G ++ C +C +SI+H+ I A +LW +L GV
Sbjct: 718 GKVLTMDQLKKRGWAVANRCFLCCEEEESIDHILIHCSKARDLWDLLFALFGV 770