BLASTX nr result

ID: Coptis21_contig00023958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023958
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274987.1| PREDICTED: CDK-activating kinase assembly fa...    55   8e-06

>ref|XP_002274987.1| PREDICTED: CDK-activating kinase assembly factor MAT1 [Vitis
           vinifera] gi|297743691|emb|CBI36574.3| unnamed protein
           product [Vitis vinifera]
          Length = 189

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%), Gaps = 4/34 (11%)
 Frame = -3

Query: 380 MMKLRA----RAGGWSLELSKRRAIEEAFGSMWI 291
           MMKLRA    +AGGWS+ELSKRRAIEEAFGS+WI
Sbjct: 156 MMKLRAERGGKAGGWSIELSKRRAIEEAFGSIWI 189


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