BLASTX nr result

ID: Coptis21_contig00023745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023745
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271327.2| PREDICTED: WD repeat-containing protein 43-l...   251   6e-65
ref|XP_002516984.1| nucleotide binding protein, putative [Ricinu...   250   1e-64
emb|CBL94162.1| putative transducin family protein / WD-40 repea...   248   5e-64
ref|XP_004172501.1| PREDICTED: uncharacterized LOC101213788, par...   243   2e-62
ref|XP_004150096.1| PREDICTED: uncharacterized protein LOC101213...   243   2e-62

>ref|XP_002271327.2| PREDICTED: WD repeat-containing protein 43-like [Vitis vinifera]
           gi|296083309|emb|CBI22945.3| unnamed protein product
           [Vitis vinifera]
          Length = 628

 Score =  251 bits (641), Expect = 6e-65
 Identities = 123/173 (71%), Positives = 147/173 (84%), Gaps = 2/173 (1%)
 Frame = -3

Query: 513 SNIRDLLTTFSPSSEFFAISSGDGRIKIWDTVKGQVQTEFADLTSNEGTDLYSKSQTGHL 334
           SNIRDLLTTFSPS +FFAISSGDGRIKIWDT+KGQVQTEFAD+ S + T+LYSK + GHL
Sbjct: 4   SNIRDLLTTFSPSLDFFAISSGDGRIKIWDTLKGQVQTEFADIISTDTTNLYSKPERGHL 63

Query: 333 SLDYSCMKWLPI--KRKKKADRSLLALGTGSGDVLALDVAVGDLKWRFNDCHPGGVNAIS 160
           S+DY+C+KWL +  K+K+K   SLL LGTGSGDVLALDV+ G+LKWR  DCHPGGV+AIS
Sbjct: 64  SVDYTCLKWLSLDSKKKRKLRCSLLVLGTGSGDVLALDVSAGELKWRIGDCHPGGVSAIS 123

Query: 159 FATRSSCIYTAGVDGMVCQIDYMSGSLLQKFKASTKAISSMAISSDGSMLATA 1
            +T  SCIY AG DGM+ +ID  +G+LL KF+ASTKAISSM++SSDG +LATA
Sbjct: 124 CSTDGSCIYAAGADGMISKIDSSAGNLLGKFRASTKAISSMSVSSDGKVLATA 176


>ref|XP_002516984.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223544072|gb|EEF45598.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 586

 Score =  250 bits (639), Expect = 1e-64
 Identities = 118/173 (68%), Positives = 145/173 (83%), Gaps = 2/173 (1%)
 Frame = -3

Query: 513 SNIRDLLTTFSPSSEFFAISSGDGRIKIWDTVKGQVQTEFADLTSNEGTDLYSKSQTGHL 334
           SNIRD+LT FSPS ++FAISSGDGR+KIWDTVKGQ+QTEFAD+TS+   D Y+K + GHL
Sbjct: 4   SNIRDILTAFSPSLDYFAISSGDGRVKIWDTVKGQLQTEFADITSSNNADFYTKPERGHL 63

Query: 333 SLDYSCMKWLPI--KRKKKADRSLLALGTGSGDVLALDVAVGDLKWRFNDCHPGGVNAIS 160
           S+DY+CMKWL +  KRK+K   SLL LGTGSGDVLALDV+ G LKW  +DCHPGGV+AIS
Sbjct: 64  SIDYTCMKWLSLDRKRKRKLGSSLLVLGTGSGDVLALDVSAGQLKWTVSDCHPGGVSAIS 123

Query: 159 FATRSSCIYTAGVDGMVCQIDYMSGSLLQKFKASTKAISSMAISSDGSMLATA 1
           F+T  SCIYTAG DGM C++D  +G++L KF+ASTKAISS+++S DG +LATA
Sbjct: 124 FSTSDSCIYTAGADGMCCKLDPQTGNMLGKFRASTKAISSVSVSPDGKILATA 176


>emb|CBL94162.1| putative transducin family protein / WD-40 repeat family protein
           [Malus x domestica]
          Length = 629

 Score =  248 bits (633), Expect = 5e-64
 Identities = 120/173 (69%), Positives = 143/173 (82%), Gaps = 2/173 (1%)
 Frame = -3

Query: 513 SNIRDLLTTFSPSSEFFAISSGDGRIKIWDTVKGQVQTEFADLTSNEGTDLYSKSQTGHL 334
           SNIRDLLT FSPS + FAISSGDGRIKIWDTVKGQVQTEF D+ ++E T +Y+K + GHL
Sbjct: 4   SNIRDLLTAFSPSLDLFAISSGDGRIKIWDTVKGQVQTEFTDIVASEDTSIYAKRERGHL 63

Query: 333 SLDYSCMKWLPIKRKKKAD--RSLLALGTGSGDVLALDVAVGDLKWRFNDCHPGGVNAIS 160
           S+DY+CMKW   +RKKK     S L LGTG GDVLALDVA G LKWR NDCH GGV++IS
Sbjct: 64  SVDYTCMKWFSSERKKKRKLGSSFLVLGTGGGDVLALDVAAGHLKWRVNDCHAGGVSSIS 123

Query: 159 FATRSSCIYTAGVDGMVCQIDYMSGSLLQKFKASTKAISSMAISSDGSMLATA 1
           FA  +SC+YTAG DGM+CQID ++G+L  KFKASTKAISSM++SS+G++LATA
Sbjct: 124 FARNTSCLYTAGADGMICQIDSLTGNLSGKFKASTKAISSMSVSSNGNILATA 176


>ref|XP_004172501.1| PREDICTED: uncharacterized LOC101213788, partial [Cucumis sativus]
          Length = 547

 Score =  243 bits (620), Expect = 2e-62
 Identities = 114/173 (65%), Positives = 144/173 (83%), Gaps = 2/173 (1%)
 Frame = -3

Query: 513 SNIRDLLTTFSPSSEFFAISSGDGRIKIWDTVKGQVQTEFADLTSNEGTDLYSKSQTGHL 334
           SNIRDLLT+FSP   FFAISSGDGRIKIWDT+KGQ+QTEFAD  +++ T + +K + GHL
Sbjct: 4   SNIRDLLTSFSPDLHFFAISSGDGRIKIWDTLKGQIQTEFADFFTSDSTSILTKPEKGHL 63

Query: 333 SLDYSCMKWLPIKRKKKADRS--LLALGTGSGDVLALDVAVGDLKWRFNDCHPGGVNAIS 160
           S+DY CMKWL +++K+K  R   LL LGTGSGDVLALDVA G+LKW+ +DCHPGGV +IS
Sbjct: 64  SVDYKCMKWLSLEKKRKRKRQCLLLLLGTGSGDVLALDVAAGELKWKISDCHPGGVASIS 123

Query: 159 FATRSSCIYTAGVDGMVCQIDYMSGSLLQKFKASTKAISSMAISSDGSMLATA 1
           F T  SCIYTAG DGM+C+I+ ++G+LL+KFKASTKAIS +++S DG ++ATA
Sbjct: 124 FPTHGSCIYTAGADGMLCEINSLTGNLLRKFKASTKAISCISVSPDGKIIATA 176


>ref|XP_004150096.1| PREDICTED: uncharacterized protein LOC101213788 [Cucumis sativus]
          Length = 570

 Score =  243 bits (620), Expect = 2e-62
 Identities = 114/173 (65%), Positives = 144/173 (83%), Gaps = 2/173 (1%)
 Frame = -3

Query: 513 SNIRDLLTTFSPSSEFFAISSGDGRIKIWDTVKGQVQTEFADLTSNEGTDLYSKSQTGHL 334
           SNIRDLLT+FSP   FFAISSGDGRIKIWDT+KGQ+QTEFAD  +++ T + +K + GHL
Sbjct: 4   SNIRDLLTSFSPDLHFFAISSGDGRIKIWDTLKGQIQTEFADFFTSDSTSILTKPEKGHL 63

Query: 333 SLDYSCMKWLPIKRKKKADRS--LLALGTGSGDVLALDVAVGDLKWRFNDCHPGGVNAIS 160
           S+DY CMKWL +++K+K  R   LL LGTGSGDVLALDVA G+LKW+ +DCHPGGV +IS
Sbjct: 64  SVDYKCMKWLSLEKKRKRKRQCLLLLLGTGSGDVLALDVAAGELKWKISDCHPGGVASIS 123

Query: 159 FATRSSCIYTAGVDGMVCQIDYMSGSLLQKFKASTKAISSMAISSDGSMLATA 1
           F T  SCIYTAG DGM+C+I+ ++G+LL+KFKASTKAIS +++S DG ++ATA
Sbjct: 124 FPTHGSCIYTAGADGMLCEINSLTGNLLRKFKASTKAISCISVSPDGKIIATA 176


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