BLASTX nr result

ID: Coptis21_contig00023716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023716
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276606.1| PREDICTED: probable serine/threonine-protein...   140   3e-31
emb|CBI26114.3| unnamed protein product [Vitis vinifera]              138   1e-30
ref|XP_002312751.1| predicted protein [Populus trichocarpa] gi|2...   131   1e-28
ref|XP_002516867.1| ATP binding protein, putative [Ricinus commu...   131   2e-28
ref|XP_002512278.1| Serine/threonine-protein kinase cdk9, putati...   125   9e-27

>ref|XP_002276606.1| PREDICTED: probable serine/threonine-protein kinase At1g54610
           [Vitis vinifera]
          Length = 575

 Score =  140 bits (352), Expect = 3e-31
 Identities = 71/115 (61%), Positives = 81/115 (70%), Gaps = 9/115 (7%)
 Frame = +2

Query: 50  TRSRDRSARRIPAPEANAESRANHDRLRRITRANAKSKSEKFPPAHQDGSLALPLGSPHY 229
           TR+RDR+ R +PAPEANAE +AN DR R IT ANAKSKSEKFPP HQDG+L  PLGS H+
Sbjct: 441 TRTRDRAVRAMPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGTLGYPLGSSHH 500

Query: 230 MDPAFDPQDVTFSSTIFTYQKGPVQNLSGRLVDPATI---------VGLGHLSSK 367
           +DP FDP DV FSS+ FTY K P+Q  SG LVDPA +          G GH  SK
Sbjct: 501 LDPVFDPPDVPFSSSNFTYSKAPIQTWSGPLVDPAAVGAPRRKKYMAGDGHAQSK 555


>emb|CBI26114.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  138 bits (348), Expect = 1e-30
 Identities = 66/97 (68%), Positives = 76/97 (78%)
 Frame = +2

Query: 50  TRSRDRSARRIPAPEANAESRANHDRLRRITRANAKSKSEKFPPAHQDGSLALPLGSPHY 229
           TR+RDR+ R +PAPEANAE +AN DR R IT ANAKSKSEKFPP HQDG+L  PLGS H+
Sbjct: 441 TRTRDRAVRAMPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGTLGYPLGSSHH 500

Query: 230 MDPAFDPQDVTFSSTIFTYQKGPVQNLSGRLVDPATI 340
           +DP FDP DV FSS+ FTY K P+Q  SG LVDPA +
Sbjct: 501 LDPVFDPPDVPFSSSNFTYSKAPIQTWSGPLVDPAAV 537


>ref|XP_002312751.1| predicted protein [Populus trichocarpa] gi|222852571|gb|EEE90118.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score =  131 bits (330), Expect = 1e-28
 Identities = 65/96 (67%), Positives = 73/96 (76%)
 Frame = +2

Query: 53  RSRDRSARRIPAPEANAESRANHDRLRRITRANAKSKSEKFPPAHQDGSLALPLGSPHYM 232
           RSRDR AR  PAPEANAE +AN DR R IT ANAKSKSEKFPP HQDG+L  PLGS H++
Sbjct: 387 RSRDRVARANPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGTLGYPLGSSHHI 446

Query: 233 DPAFDPQDVTFSSTIFTYQKGPVQNLSGRLVDPATI 340
           DP FDP DV FS+T F+Y K  +Q  SG LVDPA +
Sbjct: 447 DPVFDPPDVPFSTTNFSYSKAHIQTWSGPLVDPAAV 482


>ref|XP_002516867.1| ATP binding protein, putative [Ricinus communis]
           gi|223543955|gb|EEF45481.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 564

 Score =  131 bits (329), Expect = 2e-28
 Identities = 63/97 (64%), Positives = 73/97 (75%)
 Frame = +2

Query: 50  TRSRDRSARRIPAPEANAESRANHDRLRRITRANAKSKSEKFPPAHQDGSLALPLGSPHY 229
           +R RDR  R +PAPEANAE +AN DR R IT ANAKSKSEKFPP HQDG+L  PLGS H+
Sbjct: 419 SRPRDRPVRAVPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGTLGYPLGSSHH 478

Query: 230 MDPAFDPQDVTFSSTIFTYQKGPVQNLSGRLVDPATI 340
           +DP FDP DV FSST F+Y K  +Q  SG L+DPA +
Sbjct: 479 IDPVFDPPDVPFSSTNFSYSKAHIQTWSGPLMDPAAV 515


>ref|XP_002512278.1| Serine/threonine-protein kinase cdk9, putative [Ricinus communis]
           gi|223548239|gb|EEF49730.1| Serine/threonine-protein
           kinase cdk9, putative [Ricinus communis]
          Length = 571

 Score =  125 bits (314), Expect = 9e-27
 Identities = 61/98 (62%), Positives = 74/98 (75%)
 Frame = +2

Query: 53  RSRDRSARRIPAPEANAESRANHDRLRRITRANAKSKSEKFPPAHQDGSLALPLGSPHYM 232
           R+RDR+ R +PAPEANAE ++N DR R I  ANAKSKSEKFPP HQDG+L  P+G+  ++
Sbjct: 448 RTRDRAPRPMPAPEANAELQSNIDRRRLINHANAKSKSEKFPPPHQDGALGYPIGASQHI 507

Query: 233 DPAFDPQDVTFSSTIFTYQKGPVQNLSGRLVDPATIVG 346
           DPAF P DV +SST FTY K PVQ  SG L+DPA+  G
Sbjct: 508 DPAFVPPDVPYSSTSFTYSKEPVQTWSGPLIDPASAGG 545


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