BLASTX nr result

ID: Coptis21_contig00023369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023369
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_16599981.1| hypothetical protein HMPREF9565_01483 [Propio...   140   1e-31
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3] gi...    94   9e-18
emb|CAJ30042.1| hypothetical protein mgI382 [Magnetospirillum gr...    73   3e-11
ref|YP_001312258.1| hypothetical protein CYtaCp093 [Cycas taitun...    73   3e-11
gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]            71   8e-11

>ref|ZP_16599981.1| hypothetical protein HMPREF9565_01483 [Propionibacterium acnes
           HL053PA2] gi|315078257|gb|EFT50296.1| hypothetical
           protein HMPREF9565_01483 [Propionibacterium acnes
           HL053PA2]
          Length = 113

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/64 (98%), Positives = 64/64 (100%)
 Frame = -1

Query: 194 LRIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSGQRSHPTYHRG 15
           +RIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSGQRSHPTYHRG
Sbjct: 1   MRIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSGQRSHPTYHRG 60

Query: 14  CWHV 3
           CWHV
Sbjct: 61  CWHV 64


>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3]
           gi|238832245|gb|EEQ24559.1| pG1 protein [Lactobacillus
           jensenii 269-3]
          Length = 174

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/74 (62%), Positives = 51/74 (68%)
 Frame = -1

Query: 224 RLRHWCSS*YLRIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSG 45
           RLRHWCSS YLRIPPLH EF SPL  S   VS A   LS +++  T  +    FTPNKSG
Sbjct: 14  RLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDAVLRLSRRLSHQTYQSACARFTPNKSG 73

Query: 44  QRSHPTYHRGCWHV 3
           QR  PTY+RGCWHV
Sbjct: 74  QRLPPTYYRGCWHV 87


>emb|CAJ30042.1| hypothetical protein mgI382 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 78

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/62 (61%), Positives = 41/62 (66%)
 Frame = -1

Query: 224 RLRHWCSS*YLRIPPLHQEFHSPLPSSSQPVSKARSGLSPKITLPTRSTTYEPFTPNKSG 45
           RLRHWCSS YLRI PLH EFH PL  SS  VSKA   LSP ++L T  T    FTP+ S 
Sbjct: 17  RLRHWCSSEYLRISPLHSEFHYPLRDSSSTVSKAVPRLSPGLSLLTDRTACVRFTPSNSE 76

Query: 44  QR 39
           QR
Sbjct: 77  QR 78


>ref|YP_001312258.1| hypothetical protein CYtaCp093 [Cycas taitungensis]
           gi|150251548|ref|YP_001312280.1| hypothetical protein
           CYtaCp115 [Cycas taitungensis]
           gi|452848925|ref|YP_007474603.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|452849010|ref|YP_007474689.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|149941576|dbj|BAF65000.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|149941598|dbj|BAF65022.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|372863080|gb|AEX99153.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|372863165|gb|AEX99238.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
          Length = 75

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/73 (54%), Positives = 47/73 (64%)
 Frame = -3

Query: 219 SPLVFLLISAHSTAPPGIPFSPTFLKSTRIESTLRVKPQDYTSDAINHLRALYAQ*IRTT 40
           SPLVF  IS H TAPP IP +PT L+        RV+P D T+D  +HL+ LYAQ  R T
Sbjct: 3   SPLVFFPISTHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRIT 62

Query: 39  LAPYVSPRLLARS 1
           LA  V PRLLA+S
Sbjct: 63  LASSVLPRLLAQS 75


>gb|AAV44205.1| unknow protein [Oryza sativa Japonica Group]
          Length = 265

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/73 (53%), Positives = 47/73 (64%)
 Frame = -3

Query: 219 SPLVFLLISAHSTAPPGIPFSPTFLKSTRIESTLRVKPQDYTSDAINHLRALYAQ*IRTT 40
           SPLVF  IS H TAPP IP +PT L+        RV+P D T+D  +HL+ LYAQ  R T
Sbjct: 57  SPLVFFPISMHFTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRIT 116

Query: 39  LAPYVSPRLLARS 1
           LA  V PRLLA++
Sbjct: 117 LASSVLPRLLAQN 129


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