BLASTX nr result

ID: Coptis21_contig00023288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023288
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60872.1| hypothetical protein VITISV_016380 [Vitis vinifera]   109   7e-22
emb|CBI16080.3| unnamed protein product [Vitis vinifera]              107   3e-21
emb|CAN65209.1| hypothetical protein VITISV_043547 [Vitis vinifera]   104   2e-20
ref|XP_002313419.1| predicted protein [Populus trichocarpa] gi|2...   102   6e-20
ref|XP_002520515.1| Transcriptional regulator SUPERMAN, putative...    97   5e-18

>emb|CAN60872.1| hypothetical protein VITISV_016380 [Vitis vinifera]
          Length = 186

 Score =  109 bits (272), Expect = 7e-22
 Identities = 70/174 (40%), Positives = 96/174 (55%), Gaps = 3/174 (1%)
 Frame = +2

Query: 38  MESDPPNLENSDHVEIWATVEHEGPSH-LRCYQCNFCKRGFSNAQALGGHMNIHRKDRAK 214
           ME +PP++E  +  +I   ++ +G    +R Y C FCKRGFSNAQALGGHMNIHRKDRAK
Sbjct: 1   MEINPPSVEKFE--QIACNLDEQGSGEQVRAYTCTFCKRGFSNAQALGGHMNIHRKDRAK 58

Query: 215 LKSPFCDDSQLSLDIKKDDS--SNVPPLFXXXXXXXXKQVICTLEYPGALPRGDDVVKEG 388
           LK    D+S LS+D++K +      P           +   CTL+ P  L   DD+   G
Sbjct: 59  LKQTE-DESLLSVDMEKKNPLIHPQPSADNLSQLGSTEGKDCTLKRPLTLSGEDDISPSG 117

Query: 389 ESHAVELQKLPLFAETPSSSTQTVSNEGGRIEDGTKQPKHISKNDGSLDLELRL 550
           +    +L +L LF+E PS      ++  G  E+ T+   H   +   LDLELRL
Sbjct: 118 KDGMEKLHQLSLFSEKPSKXNDQRASSXGGHEEKTRHSHH-GSSQKELDLELRL 170


>emb|CBI16080.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  107 bits (267), Expect = 3e-21
 Identities = 69/177 (38%), Positives = 90/177 (50%), Gaps = 6/177 (3%)
 Frame = +2

Query: 38  MESDPPNLENSDHVEIWATVEHEGPSHLRCYQCNFCKRGFSNAQALGGHMNIHRKDRAKL 217
           ME+D   LE +   ++  T + +GPS  R Y+C FCKRGFS AQALGGHMNIHRKD+AKL
Sbjct: 1   METDHQTLETTSD-QVVCTSDDQGPSQARSYECTFCKRGFSTAQALGGHMNIHRKDKAKL 59

Query: 218 KSPFCDDSQLSLDIKKDDS--SNVPPLFXXXXXXXXKQVICTLEYPGALPRGDDVVKEGE 391
           K    +  Q SLDI K  S  S +P            +    + +P  +  G+D     +
Sbjct: 60  KKASNEAQQYSLDITKPASLFSPIPTNAKDPLQAMYSEERSKIAWPNWIVSGEDTTIRAQ 119

Query: 392 SHAVELQKLPLFAETPSSSTQTVSNEGGRIEDGTKQPKHISKNDGS----LDLELRL 550
           +   E QKL    ETPS++   +      I       K +S   GS    LDLELRL
Sbjct: 120 TRVGEPQKLTFLGETPSNTRDRMLTSQDMIST-VNAGKGLSSGQGSSGAELDLELRL 175


>emb|CAN65209.1| hypothetical protein VITISV_043547 [Vitis vinifera]
          Length = 193

 Score =  104 bits (259), Expect = 2e-20
 Identities = 70/178 (39%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
 Frame = +2

Query: 38  MESDPPNLENSDHVEIWATVEHEGPSHLRCYQCNFCKRGFSNAQALGGHMNIHRKDRAKL 217
           ME+D   LE +   ++  T + +GPS  R Y+C FCKRGFS AQALGGHMNIHRKD+AKL
Sbjct: 1   METDHQTLETTSD-QVVCTSDDQGPSQARSYECTFCKRGFSTAQALGGHMNIHRKDKAKL 59

Query: 218 KSPFCDDSQLSLDIKKDDS--SNVPPLFXXXXXXXXKQVICTLEYPGALPRG-DDVVKEG 388
           K    +  Q SLDI K  S  S +P            +    + +P  +  G DD     
Sbjct: 60  KKASNEAQQYSLDITKPASLFSPIPTNAKDPLQAMYSEERSKIAWPNWIVSGEDDTTIRA 119

Query: 389 ESHAVELQKLPLFAETPSSSTQTVSNEGGRIEDGTKQPKHISKNDGS----LDLELRL 550
           ++   E QKL    ETPS++   +      I       K +S   GS    LDLELRL
Sbjct: 120 QTRVGEPQKLTFLGETPSNTRDRMLTSQDMIST-VNAGKGLSSGQGSSGAELDLELRL 176


>ref|XP_002313419.1| predicted protein [Populus trichocarpa] gi|222849827|gb|EEE87374.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  102 bits (255), Expect = 6e-20
 Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 6/186 (3%)
 Frame = +2

Query: 47  DPPNLENSDHVEIWATVEHE---GPSHLRCYQCNFCKRGFSNAQALGGHMNIHRKDRAKL 217
           D P+ E+ D V    T++HE   G S  R Y+C FCKRGFSNAQALGGHMNIHRKD+AKL
Sbjct: 5   DQPSQESPDQV----TLDHEQEQGTSQARSYECTFCKRGFSNAQALGGHMNIHRKDKAKL 60

Query: 218 KSPFCDDSQLSLDIKKDDSSNVPPLFXXXXXXXXKQVICTLEYPGALPRG---DDVVKEG 388
                 ++Q SLDI K + S  P +         +    ++++P  + +     D  K  
Sbjct: 61  LKHSSSETQQSLDIPKINPSFSPAITSLMESGRDES---SIKWPFIVDKAGSDHDDTKRD 117

Query: 389 ESHAVELQKLPLFAETPSSSTQTVSNEGGRIEDGTKQPKHISKNDGSLDLELRL*TDVQD 568
           ++   E+QKL  F +  SSST+   N   ++   +K+    S ++  +DLELRL  + Q+
Sbjct: 118 KTQVGEIQKLGFFVQN-SSSTEDHQNPSSQVHGISKKSDLSSSSE--IDLELRLWPEPQE 174

Query: 569 SEDMDH 586
           S    H
Sbjct: 175 SSPGFH 180


>ref|XP_002520515.1| Transcriptional regulator SUPERMAN, putative [Ricinus communis]
           gi|223540357|gb|EEF41928.1| Transcriptional regulator
           SUPERMAN, putative [Ricinus communis]
          Length = 246

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 68/199 (34%), Positives = 97/199 (48%), Gaps = 21/199 (10%)
 Frame = +2

Query: 38  MESDPPNLENSDHVEIWATVEHEGPSHLRCYQCNFCKRGFSNAQALGGHMNIHRKDRAKL 217
           ME+D  N ENSD  +     E  G   +R Y+C FC+RGFSNAQALGGHMNIHRKD+AKL
Sbjct: 32  METDQSNQENSDQDQ-----ERGGSCQVRSYECTFCRRGFSNAQALGGHMNIHRKDKAKL 86

Query: 218 KSPFCDDSQLSLDIKKDDSSNV-----PPLFXXXXXXXXKQVIC-------TLEYPGALP 361
           K    ++ +  L      S+N+      P+          +V          + +   L 
Sbjct: 87  KHSTSNEPRQHLQSVDMISNNIISHSFSPIPTAPSSHPVMEVKSGQDRSSPMINWAWILD 146

Query: 362 RGDDVVKEGESHAVELQKLPLFAETPSSST------QTVSNEGGRIEDGTKQ---PKHIS 514
           +  D  K+ ++H  E+Q+L  F + PSS+       Q    + G +   T++   P H  
Sbjct: 147 KESDTCKKNKTHVGEIQQLCFFVDNPSSTKDQDHHHQQEEQQPGNLHGSTEKGLSPSH-G 205

Query: 515 KNDGSLDLELRL*TDVQDS 571
            +   LDLELRL  +  DS
Sbjct: 206 LSSSELDLELRLGPEPHDS 224


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