BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023215
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   143   2e-32
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   139   2e-31
gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thali...   136   2e-30
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]           136   2e-30

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  149 bits (375), Expect = 3e-34
 Identities = 64/145 (44%), Positives = 102/145 (70%)
 Frame = +2

Query: 20  QVESIIQFQRGELPMRYLGLPLITTRLKNTDCVALIEKVRTKIQAWRGRALSYAGRLQLL 199
           Q+  I+ F+ GELPM+YLG+PL+++RLK   C  L++++ +K++ W  R LSYAGR+QL+
Sbjct: 42  QIIHILGFREGELPMKYLGVPLLSSRLKAIYCKGLVDRITSKVRHWTCRTLSYAGRVQLI 101

Query: 200 KAVLNNMSIYWTSSFVLPQQTIDTINQMCRNFLWSGPKCATSHALISWERLCFPYAEGGL 379
            +VL ++ +YW S F+LP Q I  + Q+ ++FLWSG    T+ A ++W+++C P  EGGL
Sbjct: 102 NSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGL 161

Query: 380 GIRNLSTSNLAANLKHIWNIVSGKE 454
           GI+++   N  A LKHIWN+ +  +
Sbjct: 162 GIKSIKEWNKIALLKHIWNLCNDSD 186


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/147 (47%), Positives = 97/147 (65%)
 Frame = +2

Query: 5    ATICTQVESIIQFQRGELPMRYLGLPLITTRLKNTDCVALIEKVRTKIQAWRGRALSYAG 184
            AT   +V     F  G+LP+RYLGLPLIT RL  TDC+ L+E+VR +I +W  R LSYAG
Sbjct: 750  ATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAG 809

Query: 185  RLQLLKAVLNNMSIYWTSSFVLPQQTIDTINQMCRNFLWSGPKCATSHALISWERLCFPY 364
            RL L+ +VL ++  +W ++F LP++ I  + +MC  FLWSG +  ++ A ISW  +C P 
Sbjct: 810  RLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPK 869

Query: 365  AEGGLGIRNLSTSNLAANLKHIWNIVS 445
             EGGLG+R+L  +N    LK +W IVS
Sbjct: 870  DEGGLGLRSLKEANDVCCLKLVWKIVS 896


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/146 (44%), Positives = 95/146 (65%)
 Frame = +2

Query: 14   CTQVESIIQFQRGELPMRYLGLPLITTRLKNTDCVALIEKVRTKIQAWRGRALSYAGRLQ 193
            C  + +   F  G LP+RYLGLPL+T R+   DC+ L+EK+R++I +W+ R LSYAGRLQ
Sbjct: 1008 CASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQ 1067

Query: 194  LLKAVLNNMSIYWTSSFVLPQQTIDTINQMCRNFLWSGPKCATSHALISWERLCFPYAEG 373
            LL +V+++++ +W S+F LP+  I  I Q+   FLWSG       A ++W  +C P +EG
Sbjct: 1068 LLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKPKSEG 1127

Query: 374  GLGIRNLSTSNLAANLKHIWNIVSGK 451
            GLG+R+L  +N     K IW +VS K
Sbjct: 1128 GLGLRSLVDANKICCFKLIWRLVSAK 1153


>gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 355

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/133 (46%), Positives = 90/133 (67%)
 Frame = +2

Query: 53  ELPMRYLGLPLITTRLKNTDCVALIEKVRTKIQAWRGRALSYAGRLQLLKAVLNNMSIYW 232
           +LP+RYLGLPL+T  +   D + LIEK+R +I +W GR LSY GRLQL+K+VL +++ +W
Sbjct: 11  QLPVRYLGLPLMTKAMTAHDYLPLIEKIRKRISSWTGRFLSYCGRLQLIKSVLMSITNFW 70

Query: 233 TSSFVLPQQTIDTINQMCRNFLWSGPKCATSHALISWERLCFPYAEGGLGIRNLSTSNLA 412
           +S+F LP   +  I ++C  FLWSGP   T +A I+W ++C P  EGGLG+R L   N  
Sbjct: 71  SSAFRLPGNCMKEIERLCSAFLWSGPDLKTHNAKIAWSKVCLPMCEGGLGLRPLKEINTV 130

Query: 413 ANLKHIWNIVSGK 451
             LK IW +++ +
Sbjct: 131 CGLKLIWRLLASQ 143


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/135 (45%), Positives = 92/135 (68%)
 Frame = +2

Query: 41  FQRGELPMRYLGLPLITTRLKNTDCVALIEKVRTKIQAWRGRALSYAGRLQLLKAVLNNM 220
           F  G LP+RYLGLPL+T ++  +D   L+EK+R +I  W  R LS+AGRLQL+ +V++++
Sbjct: 18  FASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSL 77

Query: 221 SIYWTSSFVLPQQTIDTINQMCRNFLWSGPKCATSHALISWERLCFPYAEGGLGIRNLST 400
           + +W S+F LP   I  I+ +C +FLWSGP+  T  A ++W  +C P  EGGLGIR+L  
Sbjct: 78  TNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKE 137

Query: 401 SNLAANLKHIWNIVS 445
           +N  + LK IW ++S
Sbjct: 138 ANKVSLLKLIWRMLS 152