BLASTX nr result

ID: Coptis21_contig00023173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023173
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274500.1| PREDICTED: ABC transporter I family member 1...   149   3e-34
ref|XP_002328881.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_004138625.1| PREDICTED: ABC transporter I family member 1...   146   2e-33
ref|XP_002512910.1| metal abc transporter, putative [Ricinus com...   143   1e-32
ref|XP_003622165.1| ABC transporter I family member [Medicago tr...   140   1e-31

>ref|XP_002274500.1| PREDICTED: ABC transporter I family member 11, chloroplastic [Vitis
           vinifera] gi|296082322|emb|CBI21327.3| unnamed protein
           product [Vitis vinifera]
          Length = 284

 Score =  149 bits (375), Expect = 3e-34
 Identities = 75/97 (77%), Positives = 83/97 (85%)
 Frame = -1

Query: 454 VGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXX 275
           VGLNGISLD+DPH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADVV      
Sbjct: 186 VGLNGISLDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVELLKHL 245

Query: 274 XXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKEPM 164
                 LVVSHDLKEL+ LVD+SWRMEMGG+LK+EP+
Sbjct: 246 KKELTILVVSHDLKELAALVDRSWRMEMGGVLKEEPI 282


>ref|XP_002328881.1| predicted protein [Populus trichocarpa] gi|222839311|gb|EEE77648.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  147 bits (370), Expect = 1e-33
 Identities = 74/99 (74%), Positives = 82/99 (82%)
 Frame = -1

Query: 454 VGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXX 275
           VGLNGISLD+DPH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADVV      
Sbjct: 136 VGLNGISLDKDPHSLSGGYKRRLALAIQLVEVPDLLILDEPLAGLDWKARADVVKLLKHL 195

Query: 274 XXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKEPMPI 158
                 LVVSHDLKEL+ LVD SWRMEMGG L++E +P+
Sbjct: 196 KKELTILVVSHDLKELAALVDHSWRMEMGGFLREELLPV 234


>ref|XP_004138625.1| PREDICTED: ABC transporter I family member 11, chloroplastic-like
           [Cucumis sativus]
          Length = 274

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/99 (72%), Positives = 82/99 (82%)
 Frame = -1

Query: 454 VGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXX 275
           VGLNGI+LD+DPH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKAR DVV      
Sbjct: 176 VGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDVVKLLKNL 235

Query: 274 XXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKEPMPI 158
                 L+VSHDLKE + LVD SWRMEMGG+L++EP+PI
Sbjct: 236 KKELTVLIVSHDLKEFAGLVDNSWRMEMGGVLREEPLPI 274


>ref|XP_002512910.1| metal abc transporter, putative [Ricinus communis]
           gi|223547921|gb|EEF49413.1| metal abc transporter,
           putative [Ricinus communis]
          Length = 238

 Score =  143 bits (361), Expect = 1e-32
 Identities = 72/98 (73%), Positives = 80/98 (81%)
 Frame = -1

Query: 454 VGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXX 275
           VGLNGISL +DPH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDW+ARADVV      
Sbjct: 140 VGLNGISLGKDPHSLSGGYKRRLALAIQLVQVPDLLILDEPLAGLDWRARADVVKLLKQL 199

Query: 274 XXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKEPMP 161
                 L+VSHDLKEL+ LVD SWRMEMGG LK+E +P
Sbjct: 200 KKELTVLIVSHDLKELAALVDHSWRMEMGGFLKEEQLP 237


>ref|XP_003622165.1| ABC transporter I family member [Medicago truncatula]
           gi|355497180|gb|AES78383.1| ABC transporter I family
           member [Medicago truncatula]
          Length = 280

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/99 (71%), Positives = 82/99 (82%)
 Frame = -1

Query: 454 VGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXX 275
           VGL+GISLD++PH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADVV      
Sbjct: 182 VGLSGISLDKNPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHL 241

Query: 274 XXXXXXLVVSHDLKELSCLVDQSWRMEMGGLLKKEPMPI 158
                 LVVSHDL+E + LVDQSWRMEMGG L++E +P+
Sbjct: 242 KKELTVLVVSHDLREFASLVDQSWRMEMGGNLRQEFLPL 280


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