BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023141
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Gly...    41   8e-07
ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Gly...    41   8e-07
ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativ...    39   3e-06
ref|NP_001185315.1| DNA mismatch repair protein MutS2 [Arabidops...    39   3e-06
ref|NP_176687.1| DNA mismatch repair protein MutS2 [Arabidopsis ...    39   3e-06

>ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
          Length = 914

 Score = 41.2 bits (95), Expect(2) = 8e-07
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +3

Query: 261 DVKIGSATKVVVISGPNAGGKTAS 332
           D KIG  T+VVVISGPN GGKTAS
Sbjct: 419 DFKIGHGTRVVVISGPNTGGKTAS 442



 Score = 38.5 bits (88), Expect(2) = 8e-07
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +2

Query: 335 PRLPWFDLVLANIGDHQ 385
           P+LPWFDL+LA+IGDHQ
Sbjct: 465 PKLPWFDLILADIGDHQ 481


>ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
          Length = 902

 Score = 41.2 bits (95), Expect(2) = 8e-07
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +3

Query: 261 DVKIGSATKVVVISGPNAGGKTAS 332
           D KIG  T+VVVISGPN GGKTAS
Sbjct: 419 DFKIGHGTRVVVISGPNTGGKTAS 442



 Score = 38.5 bits (88), Expect(2) = 8e-07
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +2

Query: 335 PRLPWFDLVLANIGDHQ 385
           P+LPWFDL+LA+IGDHQ
Sbjct: 465 PKLPWFDLILADIGDHQ 481


>ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
           gi|449531305|ref|XP_004172627.1| PREDICTED: mutS2
           protein-like [Cucumis sativus]
          Length = 890

 Score = 38.9 bits (89), Expect(2) = 3e-06
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +3

Query: 261 DVKIGSATKVVVISGPNAGGKTAS 332
           D+KI   T+VVVISGPN GGKTAS
Sbjct: 397 DIKIMHQTRVVVISGPNTGGKTAS 420



 Score = 38.9 bits (89), Expect(2) = 3e-06
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +2

Query: 335 PRLPWFDLVLANIGDHQ 385
           P+LPWFDLVLA+IGDHQ
Sbjct: 443 PKLPWFDLVLADIGDHQ 459


>ref|NP_001185315.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
           gi|6227005|gb|AAF06041.1|AC009360_6 Contains similarity
           to gb|D90908 DNA mismatch repair protein MutS2 from
           Synechocystis sp. and is a member of PF|00488 Muts
           family of mismatch repair proteins [Arabidopsis
           thaliana] gi|332196205|gb|AEE34326.1| DNA mismatch
           repair protein MutS2 [Arabidopsis thaliana]
          Length = 876

 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 261 DVKIGSATKVVVISGPNAGGKTA 329
           D+K+ S+ KVVVISGPN GGKTA
Sbjct: 388 DIKVESSAKVVVISGPNTGGKTA 410



 Score = 38.5 bits (88), Expect(2) = 3e-06
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +2

Query: 320 KNCFRPRLPWFDLVLANIGDHQ 385
           KNC  PRLPWFDL+LA+IGD Q
Sbjct: 431 KNC--PRLPWFDLILADIGDPQ 450


>ref|NP_176687.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
           gi|332196204|gb|AEE34325.1| DNA mismatch repair protein
           MutS2 [Arabidopsis thaliana]
          Length = 857

 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 261 DVKIGSATKVVVISGPNAGGKTA 329
           D+K+ S+ KVVVISGPN GGKTA
Sbjct: 388 DIKVESSAKVVVISGPNTGGKTA 410



 Score = 38.5 bits (88), Expect(2) = 3e-06
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +2

Query: 320 KNCFRPRLPWFDLVLANIGDHQ 385
           KNC  PRLPWFDL+LA+IGD Q
Sbjct: 431 KNC--PRLPWFDLILADIGDPQ 450