BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023136
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|...   126   6e-27
ref|XP_002533653.1| transcription factor, putative [Ricinus comm...   120   2e-25
ref|XP_002310281.1| short internodes 1 [Populus trichocarpa] gi|...   118   2e-24
ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250...   117   2e-24
emb|CBI17425.3| unnamed protein product [Vitis vinifera]              115   8e-24

>ref|XP_002327777.1| short internodes 2 [Populus trichocarpa]
           gi|222836862|gb|EEE75255.1| short internodes 2 [Populus
           trichocarpa]
          Length = 344

 Score =  126 bits (316), Expect = 6e-27
 Identities = 69/132 (52%), Positives = 80/132 (60%), Gaps = 3/132 (2%)
 Frame = +1

Query: 370 EIPPESFFLYRNEEIAFNTNKGFELWXXXXXXXXXXXXXXXXXXXDIYTSAFDAAAGPSR 549
           EIP E++F YR+E+   N+ KGFELW                   D+Y+SA     GPSR
Sbjct: 32  EIPQENWFCYRSED---NSYKGFELWQQHHHHQELLHQRHQNPQQDLYSSAVGLGVGPSR 88

Query: 550 -STNISDESSSRGAHVS--MMMRXXXXXXXXXXXXXXCQDCGNQAKKDCIHMRCRTCCKS 720
            S NISDESSSR A  +  MMMR              CQDCGNQAKKDC+HMRCRTCCKS
Sbjct: 89  ASINISDESSSRSAAAAAFMMMRPVGSGVGGSIS---CQDCGNQAKKDCVHMRCRTCCKS 145

Query: 721 RGFQCPTHIKST 756
           RGF+C TH+KST
Sbjct: 146 RGFECQTHVKST 157


>ref|XP_002533653.1| transcription factor, putative [Ricinus communis]
           gi|223526448|gb|EEF28724.1| transcription factor,
           putative [Ricinus communis]
          Length = 350

 Score =  120 bits (302), Expect = 2e-25
 Identities = 68/132 (51%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
 Frame = +1

Query: 370 EIPPESFFLYRNEEIAFNTNKGFELWXXXXXXXXXXXXXXXXXXX--DIYTSAFDAAAGP 543
           EIP ES+F Y+NE++ +   KGFELW                     D+Y+SA     GP
Sbjct: 33  EIPQESWFWYKNEDVPY---KGFELWQQQQQQQQEFFRHQSLQQQQQDLYSSAAGLGVGP 89

Query: 544 SRST-NISDESSSRGAHVSMMMRXXXXXXXXXXXXXXCQDCGNQAKKDCIHMRCRTCCKS 720
           SRS+ N SDESSSR A   MMMR              CQDCGNQAKKDC+HMRCRTCCKS
Sbjct: 90  SRSSINFSDESSSRSAF--MMMRSSSGGSSMS-----CQDCGNQAKKDCVHMRCRTCCKS 142

Query: 721 RGFQCPTHIKST 756
           RGF C TH+KST
Sbjct: 143 RGFDCQTHVKST 154


>ref|XP_002310281.1| short internodes 1 [Populus trichocarpa]
           gi|222853184|gb|EEE90731.1| short internodes 1 [Populus
           trichocarpa]
          Length = 229

 Score =  118 bits (295), Expect = 2e-24
 Identities = 66/132 (50%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
 Frame = +1

Query: 370 EIPPESFFLYRNEEIAFNTNKGFELWXXXXXXXXXXXXXXXXXXXDIYTSAFDAAAGPSR 549
           EIP ES+F Y++E+I +   K FELW                   D+Y+ A     GPSR
Sbjct: 29  EIPQESWFWYKSEDIPY---KSFELWQQQHQELLHQRHQNPQQ--DLYSPAVGLGVGPSR 83

Query: 550 -STNISDESSSRGAHVS--MMMRXXXXXXXXXXXXXXCQDCGNQAKKDCIHMRCRTCCKS 720
            S NISDESSSR A  +   MM               CQDCGNQAKKDCIHMRCRTCCKS
Sbjct: 84  TSINISDESSSRSAAAAEAFMMMRPGGSGTGGAGSISCQDCGNQAKKDCIHMRCRTCCKS 143

Query: 721 RGFQCPTHIKST 756
           RGF+C TH+KST
Sbjct: 144 RGFECQTHVKST 155


>ref|XP_002267550.1| PREDICTED: uncharacterized protein LOC100250664 [Vitis vinifera]
          Length = 344

 Score =  117 bits (294), Expect = 2e-24
 Identities = 68/134 (50%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
 Frame = +1

Query: 370 EIPPESFFLYRNEEIAFNTNKGFELWXXXXXXXXXXXXXXXXXXXDIYTSAFDAAAGPSR 549
           EIPPES F YRNE+I++   KGFELW                   D+Y+S      G SR
Sbjct: 22  EIPPESCFFYRNEDISY---KGFELWQHQPQEQLHQRHQHHPQ--DLYSSGPSLGVGSSR 76

Query: 550 ST-NISDESSSRGAHVSMMMRXXXXXXXXXXXXXX----CQDCGNQAKKDCIHMRCRTCC 714
           S+ N+SD+SS R A + M                     CQDCGNQAKKDCIHMRCRTCC
Sbjct: 77  SSINLSDDSS-RSAFLMMRQAAGGGGAGAGGGGGGGGMSCQDCGNQAKKDCIHMRCRTCC 135

Query: 715 KSRGFQCPTHIKST 756
           KSRGFQCPTHIKST
Sbjct: 136 KSRGFQCPTHIKST 149


>emb|CBI17425.3| unnamed protein product [Vitis vinifera]
          Length = 317

 Score =  115 bits (289), Expect = 8e-24
 Identities = 65/130 (50%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
 Frame = +1

Query: 370 EIPPESFFLYRNEEIAFNTNKGFELWXXXXXXXXXXXXXXXXXXXDIYTSAFDAAAGPSR 549
           EIPPES F YRNE+I++   KGFELW                   D+Y+S      G SR
Sbjct: 22  EIPPESCFFYRNEDISY---KGFELWQHQPQEQLHQRHQHHPQ--DLYSSGPSLGVGSSR 76

Query: 550 ST-NISDESSSRGAHVSMMMRXXXXXXXXXXXXXXCQDCGNQAKKDCIHMRCRTCCKSRG 726
           S+ N+SD+SS                         CQDCGNQAKKDCIHMRCRTCCKSRG
Sbjct: 77  SSINLSDDSSRSA----------------------CQDCGNQAKKDCIHMRCRTCCKSRG 114

Query: 727 FQCPTHIKST 756
           FQCPTHIKST
Sbjct: 115 FQCPTHIKST 124