BLASTX nr result

ID: Coptis21_contig00023049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023049
         (1504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY90961.1| hypothetical protein OsI_12575 [Oryza sativa Indi...    82   3e-13
ref|XP_003562292.1| PREDICTED: cyclin-A3-1-like [Brachypodium di...    81   6e-13
ref|XP_002466828.1| hypothetical protein SORBIDRAFT_01g014850 [S...    80   2e-12
ref|NP_001050640.2| Os03g0607600 [Oryza sativa Japonica Group] g...    79   2e-12
gb|EAZ27746.1| hypothetical protein OsJ_11693 [Oryza sativa Japo...    79   2e-12

>gb|EAY90961.1| hypothetical protein OsI_12575 [Oryza sativa Indica Group]
          Length = 373

 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 48/132 (36%), Positives = 73/132 (55%)
 Frame = -2

Query: 1416 FSRAALVQCKSLSSSFIFCC*YFAELSLLEYEMLRFVPSKVAAAIVFLPSVTFNPEKNPW 1237
            F R++    K  S    F C Y AELSLLEY  +R +PS VAA++VF+  +T +P+ NPW
Sbjct: 246  FIRSSQEDDKYPSLPLEFMCSYLAELSLLEYGCVRLLPSVVAASVVFVARLTLDPDTNPW 305

Query: 1236 NQELEAVSKYKSCQXXXXXXXXXXXXLKRKSCSLDEYEEIHGSAIRANFSQEKFEAVLEV 1057
            +++L+ V+ Y++ +            L RK  SL         AIR  + Q +F+ V  +
Sbjct: 306  SKKLQEVTGYRASELKDCITCIHDLQLNRKGSSL--------MAIRDKYKQHRFKGVSTL 357

Query: 1056 VPLVDIPV*YFQ 1021
            +P V+IP  YF+
Sbjct: 358  LPPVEIPASYFE 369


>ref|XP_003562292.1| PREDICTED: cyclin-A3-1-like [Brachypodium distachyon]
          Length = 368

 Score = 81.3 bits (199), Expect = 6e-13
 Identities = 48/132 (36%), Positives = 74/132 (56%)
 Frame = -2

Query: 1416 FSRAALVQCKSLSSSFIFCC*YFAELSLLEYEMLRFVPSKVAAAIVFLPSVTFNPEKNPW 1237
            F R++    K  S S  F   Y +ELSLLEY  LRF+PS +AA+ VF+  +T +P+ NPW
Sbjct: 241  FIRSSQEDKKYPSLSLEFMGSYLSELSLLEYSCLRFLPSAIAASAVFVAKLTLDPDTNPW 300

Query: 1236 NQELEAVSKYKSCQXXXXXXXXXXXXLKRKSCSLDEYEEIHGSAIRANFSQEKFEAVLEV 1057
            +++L++V+ YK+ +            L+RK  S         +AIR  + Q +F+ V  +
Sbjct: 301  SKKLQSVTGYKASELKDCITTIHDLQLRRKGSS--------WNAIRDKYKQPRFKGVSAL 352

Query: 1056 VPLVDIPV*YFQ 1021
            +P V IP  YF+
Sbjct: 353  LPPVHIPASYFE 364


>ref|XP_002466828.1| hypothetical protein SORBIDRAFT_01g014850 [Sorghum bicolor]
            gi|241920682|gb|EER93826.1| hypothetical protein
            SORBIDRAFT_01g014850 [Sorghum bicolor]
          Length = 378

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 45/125 (36%), Positives = 70/125 (56%)
 Frame = -2

Query: 1395 QCKSLSSSFIFCC*YFAELSLLEYEMLRFVPSKVAAAIVFLPSVTFNPEKNPWNQELEAV 1216
            +C SL   F+    Y  ELSLL+Y +LRF+PS VAA++VF+  +T +P  NPW+++++ +
Sbjct: 260  KCPSLQLEFLGN--YLCELSLLDYSLLRFLPSLVAASVVFVARLTLDPHTNPWSKKMQTL 317

Query: 1215 SKYKSCQXXXXXXXXXXXXLKRKSCSLDEYEEIHGSAIRANFSQEKFEAVLEVVPLVDIP 1036
            + YK  +            L RK  S+         AIR  + Q KF+ V  ++P V+IP
Sbjct: 318  TGYKPSELKDCVAAIHHMQLNRKYSSM--------MAIREKYKQHKFKGVSALLPPVEIP 369

Query: 1035 V*YFQ 1021
              YF+
Sbjct: 370  ASYFK 374


>ref|NP_001050640.2| Os03g0607600 [Oryza sativa Japonica Group]
            gi|255674696|dbj|BAF12554.2| Os03g0607600 [Oryza sativa
            Japonica Group]
          Length = 395

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 47/132 (35%), Positives = 72/132 (54%)
 Frame = -2

Query: 1416 FSRAALVQCKSLSSSFIFCC*YFAELSLLEYEMLRFVPSKVAAAIVFLPSVTFNPEKNPW 1237
            F R++    K  S    F C Y AELSLLEY  +R +PS VAA++VF+  +T + + NPW
Sbjct: 246  FIRSSQEDDKYPSLPLEFMCSYLAELSLLEYGCVRLLPSVVAASVVFVARLTLDSDTNPW 305

Query: 1236 NQELEAVSKYKSCQXXXXXXXXXXXXLKRKSCSLDEYEEIHGSAIRANFSQEKFEAVLEV 1057
            +++L+ V+ Y++ +            L RK  SL         AIR  + Q +F+ V  +
Sbjct: 306  SKKLQEVTGYRASELKDCITCIHDLQLNRKGSSL--------MAIRDKYKQHRFKGVSTL 357

Query: 1056 VPLVDIPV*YFQ 1021
            +P V+IP  YF+
Sbjct: 358  LPPVEIPASYFE 369


>gb|EAZ27746.1| hypothetical protein OsJ_11693 [Oryza sativa Japonica Group]
          Length = 392

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 47/132 (35%), Positives = 72/132 (54%)
 Frame = -2

Query: 1416 FSRAALVQCKSLSSSFIFCC*YFAELSLLEYEMLRFVPSKVAAAIVFLPSVTFNPEKNPW 1237
            F R++    K  S    F C Y AELSLLEY  +R +PS VAA++VF+  +T + + NPW
Sbjct: 265  FIRSSQEDDKYPSLPLEFMCSYLAELSLLEYGCVRLLPSVVAASVVFVARLTLDSDTNPW 324

Query: 1236 NQELEAVSKYKSCQXXXXXXXXXXXXLKRKSCSLDEYEEIHGSAIRANFSQEKFEAVLEV 1057
            +++L+ V+ Y++ +            L RK  SL         AIR  + Q +F+ V  +
Sbjct: 325  SKKLQEVTGYRASELKDCITCIHDLQLNRKGSSL--------MAIRDKYKQHRFKGVSTL 376

Query: 1056 VPLVDIPV*YFQ 1021
            +P V+IP  YF+
Sbjct: 377  LPPVEIPASYFE 388


Top