BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022992
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35789.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]   125   3e-27
ref|XP_003551582.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,...   121   7e-26

>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = +2

Query: 2    KGLCASGKLNEACDFLYELVDCGVFPNIVSYNILIDNAVKLGLKKEAYQIAGEMRKNGIV 181
            KGLC SGKLNEACDFLYELVDCGV  N+V+YNILID+A KLG K+EAY I  EM+KNG+ 
Sbjct: 835  KGLCRSGKLNEACDFLYELVDCGVTLNVVNYNILIDHACKLGSKREAYTIVQEMKKNGLT 894

Query: 182  PDSITWRILEKLHGNSRK 235
            PD++TWRIL KLHGN  K
Sbjct: 895  PDAVTWRILHKLHGNVGK 912


>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Vitis vinifera]
          Length = 680

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = +2

Query: 2   KGLCASGKLNEACDFLYELVDCGVFPNIVSYNILIDNAVKLGLKKEAYQIAGEMRKNGIV 181
           KGLC SGKLNEACDFLYELVDCGV  N+V+YNILID+A KLG K+EAY I  EM+KNG+ 
Sbjct: 603 KGLCRSGKLNEACDFLYELVDCGVTLNVVNYNILIDHACKLGSKREAYTIVQEMKKNGLT 662

Query: 182 PDSITWRILEKLHGNSRK 235
           PD++TWRIL KLHGN  K
Sbjct: 663 PDAVTWRILHKLHGNVGK 680


>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
          Length = 959

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = +2

Query: 2    KGLCASGKLNEACDFLYELVDCGVFPNIVSYNILIDNAVKLGLKKEAYQIAGEMRKNGIV 181
            KGLC SGKLNEACDFLYELVDCGV  N+V+YNILID+A KLG K+EAY I  EM+KNG+ 
Sbjct: 882  KGLCRSGKLNEACDFLYELVDCGVTLNVVNYNILIDHACKLGSKREAYTIVQEMKKNGLT 941

Query: 182  PDSITWRILEKLHGNSRK 235
            PD++TWRIL KLHGN  K
Sbjct: 942  PDAVTWRILHKLHGNVGK 959


>ref|XP_003551582.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Glycine max]
          Length = 650

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/89 (66%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   KGLCASGKLNEACDFLYELVDCGVFPNIVSYNILIDNAVKLGLKKEAYQIAGEMRKNGIV 181
           KGLC SGKLNEAC FLYELVD G+ PNI SYNILI+ A  LGLK EAYQI  EM+KNG+ 
Sbjct: 554 KGLCHSGKLNEACHFLYELVDSGISPNIFSYNILINCACNLGLKIEAYQIVREMKKNGLT 613

Query: 182 PDSITWRILEKLHGNSRKPLCDHDLSLES 268
           PDS+TWRIL+KLHG  RK +   D ++ +
Sbjct: 614 PDSVTWRILDKLHGKVRKDIHSEDPTMST 642


>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score =  121 bits (303), Expect = 7e-26
 Identities = 53/78 (67%), Positives = 67/78 (85%)
 Frame = +2

Query: 2   KGLCASGKLNEACDFLYELVDCGVFPNIVSYNILIDNAVKLGLKKEAYQIAGEMRKNGIV 181
           KGLC +GKL+EAC FLYELVD GV PNI+SYNI+ID+A KLG+K+EAYQ+  EMRKNG+ 
Sbjct: 601 KGLCRAGKLDEACHFLYELVDSGVSPNIISYNIVIDSACKLGMKREAYQVVTEMRKNGLT 660

Query: 182 PDSITWRILEKLHGNSRK 235
           PD++TWRIL+KLH   ++
Sbjct: 661 PDAVTWRILDKLHATFKR 678