BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022984
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3...   114   1e-30
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3...   114   1e-30
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]   112   9e-30
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...   112   9e-30
gb|AEW07799.1| Pinus taeda anonymous locus 0_11808_01 genomic se...   110   6e-29

>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  114 bits (286), Expect(2) = 1e-30
 Identities = 53/82 (64%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
 Frame = +1

Query: 70  LEPPRTWIKAKLESKELLVICVERLKSKN-VKLEDAAFVWTEPHSKRIKVKVNVRRDFIQ 246
           L+PPRTWIKA+LESKELL  C++RL++ N VKL  A FVWTEPHSKRIKVK+ V+++ +Q
Sbjct: 64  LQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLQ 123

Query: 247 GGDLEQGYIAEFVQMDRICESC 312
           G  LEQ Y+AE+V  D +CESC
Sbjct: 124 GAILEQSYVAEYVVQDHLCESC 145



 Score = 43.1 bits (100), Expect(2) = 1e-30
 Identities = 15/24 (62%), Positives = 23/24 (95%)
 Frame = +2

Query: 2   EVDITQGMRKEVILVHCPECESYL 73
           EVDIT+G++K++ ++HCP+CESYL
Sbjct: 41  EVDITEGLQKQLTIMHCPDCESYL 64


>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  114 bits (286), Expect(2) = 1e-30
 Identities = 53/82 (64%), Positives = 67/82 (81%), Gaps = 1/82 (1%)
 Frame = +1

Query: 70  LEPPRTWIKAKLESKELLVICVERLKSKN-VKLEDAAFVWTEPHSKRIKVKVNVRRDFIQ 246
           L+PPRTWIKA+LESKELL  C++RL++ N VKL  A FVWTEPHSKRIKVK+ V+++ +Q
Sbjct: 64  LQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLQ 123

Query: 247 GGDLEQGYIAEFVQMDRICESC 312
           G  LEQ Y+AE+V  D +CESC
Sbjct: 124 GAILEQSYVAEYVVQDHLCESC 145



 Score = 43.1 bits (100), Expect(2) = 1e-30
 Identities = 15/24 (62%), Positives = 23/24 (95%)
 Frame = +2

Query: 2   EVDITQGMRKEVILVHCPECESYL 73
           EVDIT+G++K++ ++HCP+CESYL
Sbjct: 41  EVDITEGLQKQLTIMHCPDCESYL 64


>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
          Length = 594

 Score =  112 bits (279), Expect(2) = 9e-30
 Identities = 52/82 (63%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
 Frame = +1

Query: 70  LEPPRTWIKAKLESKELLVICVERLKSKN-VKLEDAAFVWTEPHSKRIKVKVNVRRDFIQ 246
           L+PP+TWIKA+LESKELL  CV+RLK+ N V+L  A F+WTEPHSKRIKVK+ V+++ + 
Sbjct: 64  LQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVLN 123

Query: 247 GGDLEQGYIAEFVQMDRICESC 312
           G  LEQ YI EFVQ + +CESC
Sbjct: 124 GAILEQAYIVEFVQQEHMCESC 145



 Score = 43.1 bits (100), Expect(2) = 9e-30
 Identities = 15/24 (62%), Positives = 22/24 (91%)
 Frame = +2

Query: 2   EVDITQGMRKEVILVHCPECESYL 73
           E+DIT+G++K V +VHCPEC++YL
Sbjct: 41  EIDITEGLQKHVTIVHCPECDTYL 64


>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score =  112 bits (279), Expect(2) = 9e-30
 Identities = 52/82 (63%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
 Frame = +1

Query: 70  LEPPRTWIKAKLESKELLVICVERLKSKN-VKLEDAAFVWTEPHSKRIKVKVNVRRDFIQ 246
           L+PP+TWIKA+LESKELL  CV+RLK+ N V+L  A F+WTEPHSKRIKVK+ V+++ + 
Sbjct: 64  LQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVLN 123

Query: 247 GGDLEQGYIAEFVQMDRICESC 312
           G  LEQ YI EFVQ + +CESC
Sbjct: 124 GAILEQAYIVEFVQQEHMCESC 145



 Score = 43.1 bits (100), Expect(2) = 9e-30
 Identities = 15/24 (62%), Positives = 22/24 (91%)
 Frame = +2

Query: 2   EVDITQGMRKEVILVHCPECESYL 73
           E+DIT+G++K V +VHCPEC++YL
Sbjct: 41  EIDITEGLQKHVTIVHCPECDTYL 64


>gb|AEW07799.1| Pinus taeda anonymous locus 0_11808_01 genomic sequence
           gi|361066977|gb|AEW07800.1| Pinus taeda anonymous locus
           0_11808_01 genomic sequence
          Length = 138

 Score =  110 bits (276), Expect(2) = 6e-29
 Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
 Frame = +1

Query: 70  LEPPRTWIKAKLESKELLVICVERLKSKN-VKLEDAAFVWTEPHSKRIKVKVNVRRDFIQ 246
           L+PP+TWIKA+LESKELL  C++RLK+ N V+L  A F+WTEPHSKRIKVK+ ++++ + 
Sbjct: 47  LQPPKTWIKAQLESKELLTFCIKRLKNLNKVRLVHAEFIWTEPHSKRIKVKLRIQKEVLN 106

Query: 247 GGDLEQGYIAEFVQMDRICESC 312
           G  LEQ Y+ EFVQ D +CE C
Sbjct: 107 GAILEQAYVVEFVQQDHMCEHC 128



 Score = 41.6 bits (96), Expect(2) = 6e-29
 Identities = 15/24 (62%), Positives = 21/24 (87%)
 Frame = +2

Query: 2  EVDITQGMRKEVILVHCPECESYL 73
          +VDIT+G++K V ++HCPEC SYL
Sbjct: 24 QVDITEGLQKHVTILHCPECNSYL 47