BLASTX nr result

ID: Coptis21_contig00022969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022969
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putativ...   122   3e-26
ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase A...   121   7e-26
emb|CBI37818.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_004164212.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...   108   3e-22

>ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|222848502|gb|EEE86049.1|
           predicted protein [Populus trichocarpa]
          Length = 2740

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/152 (40%), Positives = 96/152 (63%)
 Frame = -2

Query: 457 EKDKDYVDYIGGSLLSFVGLLKPGIAEANHLKPEXXXXXXXXXXXAFCNYPPTDLSLCIF 278
           +++++Y D +  SL+SF+ LLKP  A+ + L+P+           AFC +P T LS+CIF
Sbjct: 488 KREEEYADCMHKSLVSFLKLLKPP-AKPDSLRPDVALAALSMLCIAFCRFPTTYLSICIF 546

Query: 277 QQMHAWLPLICKQAEKSSSITFDISNYLKAFHSILHLQSSLPLDRRFLQIKRNDASSVSV 98
           QQMHAW+P IC+QAE+  S+  DISNYL+  H++L +QS   ++ +  + K +    + +
Sbjct: 547 QQMHAWIPWICEQAERGGSVALDISNYLEGIHTMLLVQSPFLMEDKPFKFKGDSTDLMHI 606

Query: 97  MLKIPWTHSLVAIPAVSLCMTKCLSVQSLSKV 2
           +LK+PWTH  + I       TKC S+Q +SK+
Sbjct: 607 VLKLPWTHPHMVIGPHPPWKTKCFSIQVVSKL 638


>ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putative [Ricinus communis]
           gi|223539506|gb|EEF41094.1| Serine/threonine-protein
           kinase ATR, putative [Ricinus communis]
          Length = 2822

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/164 (39%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
 Frame = -2

Query: 490 KKSEFPCLYTFEKDKD-YVDYIGGSLLSFVGLLKPGIAEANHLKPEXXXXXXXXXXXAFC 314
           ++S+   + +FE++++ Y D +  SLLS + +L+   +E   L P+           +FC
Sbjct: 451 EESKLTRIVSFEREEEEYADLMHASLLSLLDILQSSPSECKSLIPDVALAALSMLCISFC 510

Query: 313 NYPPTDLSLCIFQQMHAWLPLICKQAEKSSSITFDISNYLKAFHSILHLQSSLPLDRRFL 134
            YP T +SLCIFQQMH+W+P IC+QA +    TFDIS YL+  HSIL +QS+L ++ +  
Sbjct: 511 RYPMTIMSLCIFQQMHSWIPWICEQARRGVLFTFDISIYLEGIHSILLMQSTLLMEDKPF 570

Query: 133 QIKRNDASSVSVMLKIPWTHSLVAIPAVSLCMTKCLSVQSLSKV 2
           ++K +D   V ++LK+PWTHS +          KC SVQ +SK+
Sbjct: 571 KLKGDDVDLVHMLLKLPWTHSHMVGGPHPPWKAKCNSVQVVSKL 614


>ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase ATR-like [Vitis
           vinifera]
          Length = 2730

 Score =  121 bits (303), Expect = 7e-26
 Identities = 63/156 (40%), Positives = 95/156 (60%)
 Frame = -2

Query: 469 LYTFEKDKDYVDYIGGSLLSFVGLLKPGIAEANHLKPEXXXXXXXXXXXAFCNYPPTDLS 290
           + T E+++++ +Y+  SLLSFV LLKP + +    +PE            F  YP T+LS
Sbjct: 456 IVTCEREQEHANYMHTSLLSFVELLKPTVVKDTPFRPEVSLTALSMLCIVFSKYPQTNLS 515

Query: 289 LCIFQQMHAWLPLICKQAEKSSSITFDISNYLKAFHSILHLQSSLPLDRRFLQIKRNDAS 110
           L I QQ++AW+P IC+Q ++  SI  D+S YL+A H +L LQS L ++  F +   + A 
Sbjct: 516 LFITQQIYAWIPWICEQVKQGCSIALDLSIYLEAVHCVLLLQSPLSMENTFFRNNGDGAD 575

Query: 109 SVSVMLKIPWTHSLVAIPAVSLCMTKCLSVQSLSKV 2
            V+++LK+P+THS V   +     TKCLSVQ  SK+
Sbjct: 576 FVNIVLKLPFTHSFVLSESNPPWRTKCLSVQVQSKI 611


>emb|CBI37818.3| unnamed protein product [Vitis vinifera]
          Length = 2496

 Score =  111 bits (277), Expect = 7e-23
 Identities = 66/167 (39%), Positives = 97/167 (58%), Gaps = 11/167 (6%)
 Frame = -2

Query: 469 LYTFEKDKDYVDYIGGSLLSFVGLLKPGIAEANHLKPEXXXXXXXXXXXAFCNYPPTDLS 290
           + T E+++++ +Y+  SLLSFV LLKP + +    +PE            F  YP T+LS
Sbjct: 440 IVTCEREQEHANYMHTSLLSFVELLKPTVVKDTPFRPEVSLTALSMLCIVFSKYPQTNLS 499

Query: 289 LCIFQQMHAWLPLICKQAEKSSSITFDISNYLKAFHSILHLQS---SLPLDRRFL----- 134
           L I QQ++AW+P IC+Q ++  SI  D+S YL+A H +L LQS    L   +RF+     
Sbjct: 500 LFITQQIYAWIPWICEQVKQGCSIALDLSIYLEAVHCVLLLQSKAMDLIFFKRFMTPSFG 559

Query: 133 --QIKRND-ASSVSVMLKIPWTHSLVAIPAVSLCMTKCLSVQSLSKV 2
             +I   D A  V+++LK+P+THS V   +     TKCLSVQ  SK+
Sbjct: 560 FREINNGDGADFVNIVLKLPFTHSFVLSESNPPWRTKCLSVQVQSKI 606


>ref|XP_004164212.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATR-like [Cucumis sativus]
          Length = 2716

 Score =  108 bits (271), Expect = 3e-22
 Identities = 62/158 (39%), Positives = 91/158 (57%)
 Frame = -2

Query: 475 PCLYTFEKDKDYVDYIGGSLLSFVGLLKPGIAEANHLKPEXXXXXXXXXXXAFCNYPPTD 296
           P +   E ++ Y + +   L+SFVG LK     A+ L+PE           AFC YP T 
Sbjct: 450 PHIKICETEETYANNLHNLLVSFVGCLKASSFRADALRPEVSLTALSMLCIAFCRYPETR 509

Query: 295 LSLCIFQQMHAWLPLICKQAEKSSSITFDISNYLKAFHSILHLQSSLPLDRRFLQIKRND 116
           LS+ IFQ+M +W+P I +QA+K SSI+ DIS +L+  H+IL L S   +    L      
Sbjct: 510 LSMVIFQEMVSWIPWIYEQAKKGSSISIDISIFLEGIHNILLLPSKAIVQ---LLFNGEC 566

Query: 115 ASSVSVMLKIPWTHSLVAIPAVSLCMTKCLSVQSLSKV 2
           A ++SV+LK+PWTHS+ +  +     T+C+SVQ  SK+
Sbjct: 567 AETMSVILKVPWTHSITSTESHKPWKTRCISVQVSSKI 604


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