BLASTX nr result

ID: Coptis21_contig00022960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022960
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262673.1| PREDICTED: glutaredoxin-C9-like [Vitis vinif...   154   2e-35
emb|CAN60168.1| hypothetical protein VITISV_003664 [Vitis vinifera]   144   3e-32
ref|XP_002327897.1| glutaredoxin [Populus trichocarpa] gi|222837...   140   6e-31
ref|XP_002310416.1| glutaredoxin [Populus trichocarpa] gi|222853...   139   8e-31
gb|ABK96346.1| unknown [Populus trichocarpa x Populus deltoides]      138   2e-30

>ref|XP_002262673.1| PREDICTED: glutaredoxin-C9-like [Vitis vinifera]
          Length = 141

 Score =  154 bits (390), Expect = 2e-35
 Identities = 79/148 (53%), Positives = 108/148 (72%), Gaps = 3/148 (2%)
 Frame = +1

Query: 70  MQQAIPCKKWSPGSKESVVNQSSSIVKKEEEALNNEGVLKRPKD---MVSENAVLVLGRR 240
           MQ+A+P K W P  +E  +N  ++        L+N+ +L    +   MVSENAV+V GRR
Sbjct: 1   MQEALPYKTWLPIPREPRINTPTT-------PLHNQLLLPGTTNITNMVSENAVIVFGRR 53

Query: 241 GCCMCHVMKQLLLVHGVNPVICEVDQAEEIDVVNELGTIGSDREKNDKLQFPSVYIGGKL 420
           GCCM HV+K+LLL  GVNP +CEV++ +EI V++ELG +G+   K   +QFP+V+IGG+L
Sbjct: 54  GCCMTHVVKRLLLGLGVNPAVCEVNEEDEIGVLDELGMVGAGEGKQGAVQFPAVFIGGRL 113

Query: 421 FGDLNRLIAAHISGELVPILKQAGALWL 504
           FG L+R++AAHI+GELVPILKQAGALWL
Sbjct: 114 FGGLDRVMAAHITGELVPILKQAGALWL 141


>emb|CAN60168.1| hypothetical protein VITISV_003664 [Vitis vinifera]
          Length = 101

 Score =  144 bits (363), Expect = 3e-32
 Identities = 67/101 (66%), Positives = 86/101 (85%)
 Frame = +1

Query: 202 MVSENAVLVLGRRGCCMCHVMKQLLLVHGVNPVICEVDQAEEIDVVNELGTIGSDREKND 381
           MVSENAV+V GRRGCCM HV+K+LLL  GVNP +CEV++ +EI V++ELG +G+   K  
Sbjct: 1   MVSENAVIVFGRRGCCMTHVVKRLLLGLGVNPAVCEVNEEDEIGVLDELGMVGAGEGKQG 60

Query: 382 KLQFPSVYIGGKLFGDLNRLIAAHISGELVPILKQAGALWL 504
            +QFP+V+IGG+LFG L+R++AAHI+GELVPILKQAGALWL
Sbjct: 61  AVQFPAVFIGGRLFGGLDRVMAAHITGELVPILKQAGALWL 101


>ref|XP_002327897.1| glutaredoxin [Populus trichocarpa] gi|222837306|gb|EEE75685.1|
           glutaredoxin [Populus trichocarpa]
          Length = 155

 Score =  140 bits (352), Expect = 6e-31
 Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 13/158 (8%)
 Frame = +1

Query: 70  MQQAIPCKKWSP---------GSKESVVNQSSSIVKKEEEALNNEGVLKRPKDMVSENAV 222
           MQQAIP K W P            + + + S+  V   +E L      +   +MV ENA+
Sbjct: 1   MQQAIPYKSWLPLYTNNKPLISPSQLISHHSNGGVVAAQEVLKGS---RNISEMVQENAI 57

Query: 223 LVLGRRGCCMCHVMKQLLLVHGVNPVICEVDQAEEIDVVNELGTIGSD----REKNDKLQ 390
           +V  RRGCCM HV K+LLL  GVNP + E+D+A+EI V+ EL  IG+D         K+Q
Sbjct: 58  IVFARRGCCMSHVAKRLLLGLGVNPAVYEIDEADEISVLEELEMIGNDIGGKGNNKKKVQ 117

Query: 391 FPSVYIGGKLFGDLNRLIAAHISGELVPILKQAGALWL 504
           FP++ IGGKLFG L+ L+A HISGELVPILK+AGALWL
Sbjct: 118 FPALVIGGKLFGGLDTLMATHISGELVPILKEAGALWL 155


>ref|XP_002310416.1| glutaredoxin [Populus trichocarpa] gi|222853319|gb|EEE90866.1|
           glutaredoxin [Populus trichocarpa]
          Length = 153

 Score =  139 bits (351), Expect = 8e-31
 Identities = 77/156 (49%), Positives = 101/156 (64%), Gaps = 11/156 (7%)
 Frame = +1

Query: 70  MQQAIPCKKWSP---------GSKESVVNQSSSIVKKEEEALNNEGVLKRPKDMVSENAV 222
           MQQAIP K W P            + +   ++  V   +E L   G + +   MV ENA+
Sbjct: 1   MQQAIPYKSWPPLYTNNKPLISPFQLIARHNNGGVVATQEVLKGSGNMSK---MVQENAI 57

Query: 223 LVLGRRGCCMCHVMKQLLLVHGVNPVICEVDQAEEIDVVNELGTIGSDREKNDK--LQFP 396
           +V  RRGCCM  V K+LLL  GVNP + E+D+A+EI V+ EL  I +D  K  K  +QFP
Sbjct: 58  IVFARRGCCMSLVAKRLLLGLGVNPAVYEIDEADEISVLEELEMICNDGGKGSKKKVQFP 117

Query: 397 SVYIGGKLFGDLNRLIAAHISGELVPILKQAGALWL 504
           +++IGGKLFG L++L+AAHISGELVPILK+AGALWL
Sbjct: 118 ALFIGGKLFGGLDKLMAAHISGELVPILKEAGALWL 153


>gb|ABK96346.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 154

 Score =  138 bits (347), Expect = 2e-30
 Identities = 79/157 (50%), Positives = 102/157 (64%), Gaps = 12/157 (7%)
 Frame = +1

Query: 70  MQQAIPCKKWSP---GSKESVV-------NQSSSIVKKEEEALNNEGVLKRPKDMVSENA 219
           MQQAIP K W P    +K  +          S+  V   +E L   G + +   MV ENA
Sbjct: 1   MQQAIPYKSWPPLYTNNKPLISPFQLIAGRHSNGGVVATQEVLKGSGNMSK---MVQENA 57

Query: 220 VLVLGRRGCCMCHVMKQLLLVHGVNPVICEVDQAEEIDVVNELGTIGSDREKNDK--LQF 393
           ++V  RRGCCM  V K+LLL  GVNP + E+D+A+EI V+ EL  I +D  K  K  +QF
Sbjct: 58  IIVFARRGCCMSLVAKRLLLGLGVNPAVYEIDEADEISVLEELEMICNDGGKGSKKKVQF 117

Query: 394 PSVYIGGKLFGDLNRLIAAHISGELVPILKQAGALWL 504
           P+++IGGKLFG L++L+AAHISGELVPILK+AGALWL
Sbjct: 118 PALFIGGKLFGGLDKLMAAHISGELVPILKEAGALWL 154