BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022920
         (1519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272410.1| PREDICTED: structural maintenance of chromos...   622   e-175
ref|XP_004135946.1| PREDICTED: structural maintenance of chromos...   618   e-174
ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   613   e-173
ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5...   605   e-170
ref|NP_197096.1| structural maintenance of chromosomes 5 [Arabid...   585   e-164

>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
            vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
            product [Vitis vinifera]
          Length = 1051

 Score =  622 bits (1603), Expect = e-175
 Identities = 313/470 (66%), Positives = 386/470 (82%)
 Frame = +3

Query: 108  VSERSAKRAKLTKRGEDDYMPGNITEIELHNFMTFSQIKCKPGPRLNLVIGPNGSGKSSL 287
            ++ER +KR K+T RGEDDY+PGNITEIELHNFMTF+ +KCKPG RLNLVIGPNGSGKSSL
Sbjct: 1    MAERRSKRPKIT-RGEDDYLPGNITEIELHNFMTFNDLKCKPGSRLNLVIGPNGSGKSSL 59

Query: 288  VCAIALGLGGEPQLLGRATSVGAFVKRGEDAGFIRISLRGDTMGEQLTITRQIESKSNKS 467
            VCAIALGLGG+PQLLGRA+S+GA+VKRGE++G+I+ISLRGDT  EQ+TI R+I+++ NKS
Sbjct: 60   VCAIALGLGGDPQLLGRASSIGAYVKRGEESGYIKISLRGDTEEEQITIMRKIDTR-NKS 118

Query: 468  EWLFNGKSVPKKDVLEIIKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPE 647
            EWLFNGK VPKKDV+EI++RFNIQVNNLTQFLPQDRV EFAKLTPVQLLEETEKAVGDP+
Sbjct: 119  EWLFNGKVVPKKDVIEIVRRFNIQVNNLTQFLPQDRVSEFAKLTPVQLLEETEKAVGDPQ 178

Query: 648  LPVRHRALIEKSRELKRLELSVKQNGDTLNQLKALNAEQEKDVERVRQREQLLAKVESMR 827
            LPV+H AL+ KSRELK+LE +V+QNG+ LN LK LN+E+EKDVERVRQR++LLAKVESM+
Sbjct: 179  LPVQHCALVLKSRELKKLEKAVEQNGEMLNCLKTLNSEREKDVERVRQRQELLAKVESMK 238

Query: 828  KKLPWLKYDKVKVDFLQAKEAEKDAEGKMNEAINILNDLNLPVEKQKKLREVQDTALKNV 1007
            KKLPWLKYD  KV +++AKE E DA+ K++EA   LND+  P+EKQ++ +   D   K V
Sbjct: 239  KKLPWLKYDMQKVRYMEAKEQENDAKKKLDEAAKTLNDIREPIEKQRQEKAALDAKCKKV 298

Query: 1008 SKLIAKNNAKRMERSENESRLGVQVVGSYKEMDELRRQEESRQHRILRAKEDXXXXXXXX 1187
            S L+  N+ +RME  E E+RLGVQ  G Y EM+ELRRQEESRQ RI +AKED        
Sbjct: 299  SGLMNGNSKRRMELLEKENRLGVQARGKYNEMEELRRQEESRQQRISKAKEDLVAAELEL 358

Query: 1188 XXXPIFEPPKSEIDNLAAQIRELDFSAKEKASKKSDQEKVLNQKKTTLWQCKERLADMES 1367
               P +E PK EI+ L +QI EL+FSA +K   KS++EK+L QKK  L QC +RL DME+
Sbjct: 359  ASLPPYEHPKDEIERLGSQILELEFSASQKRLVKSEKEKLLGQKKGALRQCVDRLKDMEN 418

Query: 1368 IHTKLLEALKRNGAERIFEAYRWVQEHRNEFNKEVFGPVLLEVKIPNREH 1517
             + KLL+AL+ +GAE+IFEAY W+QEHR+E NK+V+GPVLLEV + +R H
Sbjct: 419  KNNKLLQALQNSGAEKIFEAYHWLQEHRHELNKDVYGPVLLEVNVSHRIH 468


>ref|XP_004135946.1| PREDICTED: structural maintenance of chromosomes protein 5-like
            [Cucumis sativus]
          Length = 1053

 Score =  618 bits (1594), Expect = e-174
 Identities = 311/469 (66%), Positives = 378/469 (80%)
 Frame = +3

Query: 111  SERSAKRAKLTKRGEDDYMPGNITEIELHNFMTFSQIKCKPGPRLNLVIGPNGSGKSSLV 290
            SE  AKR ++T RGEDDYMPG+I EIELHNFMTF+ +KCKPG RLNLVIGPNGSGKSS+V
Sbjct: 4    SEHRAKRLRIT-RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIV 62

Query: 291  CAIALGLGGEPQLLGRATSVGAFVKRGEDAGFIRISLRGDTMGEQLTITRQIESKSNKSE 470
            CAIALGLGGEPQLLGRATSVGA+VKRGE++G++RI+LRG+T  E++TITR++++  NKSE
Sbjct: 63   CAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMDTH-NKSE 121

Query: 471  WLFNGKSVPKKDVLEIIKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPEL 650
            WLFNGK VPKKDV  II+RFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDP+L
Sbjct: 122  WLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL 181

Query: 651  PVRHRALIEKSRELKRLELSVKQNGDTLNQLKALNAEQEKDVERVRQREQLLAKVESMRK 830
            P+ HRAL++KS  +K +E +V++NGDTL+QLKALN EQEKDVE VRQR++LL KVESM+K
Sbjct: 182  PILHRALVDKSHGIKSIERAVEKNGDTLDQLKALNVEQEKDVEHVRQRDELLKKVESMKK 241

Query: 831  KLPWLKYDKVKVDFLQAKEAEKDAEGKMNEAINILNDLNLPVEKQKKLREVQDTALKNVS 1010
            KLPWLKYD  K ++L+ KE EK+A+ K++EA N LNDL  P+EKQK  +   D   K  S
Sbjct: 242  KLPWLKYDMKKAEYLEVKEKEKEAKKKLDEAANTLNDLKKPIEKQKLEKAKLDAKTKKYS 301

Query: 1011 KLIAKNNAKRMERSENESRLGVQVVGSYKEMDELRRQEESRQHRILRAKEDXXXXXXXXX 1190
              I  N+ KR+E  E E+RLGVQV G  KEM++LR+QEESRQ RI RAKE+         
Sbjct: 302  TRINDNHKKRVELQETENRLGVQVQGKLKEMEDLRKQEESRQQRIARAKEELESAEFELQ 361

Query: 1191 XXPIFEPPKSEIDNLAAQIRELDFSAKEKASKKSDQEKVLNQKKTTLWQCKERLADMESI 1370
              P +E PK EI+ L AQI EL+ SA +K   KS+ EK ++QK+ TL QC +RL DME+ 
Sbjct: 362  NLPAYEHPKDEIERLRAQILELEVSASQKRLMKSEIEKNISQKRNTLRQCSDRLKDMENT 421

Query: 1371 HTKLLEALKRNGAERIFEAYRWVQEHRNEFNKEVFGPVLLEVKIPNREH 1517
            +TKLL+ALK +G E+IFEAY W+QEHR+EF KEV+GPVLLEV + NR H
Sbjct: 422  NTKLLQALKNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTH 470


>ref|XP_004158182.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes
            protein 5-like [Cucumis sativus]
          Length = 1053

 Score =  613 bits (1580), Expect = e-173
 Identities = 308/469 (65%), Positives = 376/469 (80%)
 Frame = +3

Query: 111  SERSAKRAKLTKRGEDDYMPGNITEIELHNFMTFSQIKCKPGPRLNLVIGPNGSGKSSLV 290
            SE  AKR ++T RGEDDYMPG+I EIELHNFMTF+ +KCKPG RLNLVIGPNGSGKSS+V
Sbjct: 4    SEHRAKRLRIT-RGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIV 62

Query: 291  CAIALGLGGEPQLLGRATSVGAFVKRGEDAGFIRISLRGDTMGEQLTITRQIESKSNKSE 470
            CAIALGLGGEPQLLGRATSVGA+VKRGE++G++RI+LRG+T  E++TITR++++  NKSE
Sbjct: 63   CAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMDTH-NKSE 121

Query: 471  WLFNGKSVPKKDVLEIIKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPEL 650
            WLFNGK VPKKDV  II+RFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDP+L
Sbjct: 122  WLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQL 181

Query: 651  PVRHRALIEKSRELKRLELSVKQNGDTLNQLKALNAEQEKDVERVRQREQLLAKVESMRK 830
            P+ HRAL++KS  +K +E +V++NGDTL+QLKALN EQEKDVE VRQR++LL KVESM+K
Sbjct: 182  PILHRALVDKSHGIKSIERAVEKNGDTLDQLKALNVEQEKDVEHVRQRDELLKKVESMKK 241

Query: 831  KLPWLKYDKVKVDFLQAKEAEKDAEGKMNEAINILNDLNLPVEKQKKLREVQDTALKNVS 1010
            KLPWLKYD  K ++L+ KE EK+A+ K++EA N LNDL  P+EKQK  +   D   K  S
Sbjct: 242  KLPWLKYDMKKAEYLEVKEKEKEAKKKLDEAANTLNDLKKPIEKQKLEKAKLDAKTKKYS 301

Query: 1011 KLIAKNNAKRMERSENESRLGVQVVGSYKEMDELRRQEESRQHRILRAKEDXXXXXXXXX 1190
              I  N+ KR+E  E E+RLGVQV G  KEM++LR+QEESRQ RI RAKE+         
Sbjct: 302  TRINDNHKKRVELQETENRLGVQVQGKLKEMEDLRKQEESRQQRITRAKEELESAEFELQ 361

Query: 1191 XXPIFEPPKSEIDNLAAQIRELDFSAKEKASKKSDQEKVLNQKKTTLWQCKERLADMESI 1370
              P +E PK EI+ L AQI EL+ SA +K   KS+ EK ++QK+ TL QC +RL DME+ 
Sbjct: 362  NLPAYEHPKDEIERLRAQILELEVSASQKRLMKSEIEKNISQKRNTLRQCSDRLKDMENT 421

Query: 1371 HTKLLEALKRNGAERIFEAYRWVQEHRNEFNKEVFGPVLLEVKIPNREH 1517
            +TKLL+ALK +G E+  +AY W+QEHR+EF KEV+GPVLLEV + NR H
Sbjct: 422  NTKLLQALKNSGTEKXMQAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTH 470


>ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus
            communis] gi|223543042|gb|EEF44577.1| structural
            maintenance of chromosomes 5 smc5, putative [Ricinus
            communis]
          Length = 1057

 Score =  605 bits (1560), Expect = e-170
 Identities = 305/478 (63%), Positives = 376/478 (78%)
 Frame = +3

Query: 84   MSRKHSSPVSERSAKRAKLTKRGEDDYMPGNITEIELHNFMTFSQIKCKPGPRLNLVIGP 263
            M R   + V  R++KRAK T RGEDDYMPGNI E+ELHNFMT+  + CKPG RLNLVIGP
Sbjct: 1    MKRSSIAEVPNRTSKRAKTT-RGEDDYMPGNIIEMELHNFMTYDHLFCKPGSRLNLVIGP 59

Query: 264  NGSGKSSLVCAIALGLGGEPQLLGRATSVGAFVKRGEDAGFIRISLRGDTMGEQLTITRQ 443
            NGSGKSS+VCAIALGLGGEPQLLGRATSVGA+VKRGE+  +I+ISLRG+T  E++TI R+
Sbjct: 60   NGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEECAYIKISLRGNTKDERITIMRK 119

Query: 444  IESKSNKSEWLFNGKSVPKKDVLEIIKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEET 623
            I++  NKSEWL+NGK VPKK++ EI +RFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEET
Sbjct: 120  IDTH-NKSEWLYNGKVVPKKEIGEITQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEET 178

Query: 624  EKAVGDPELPVRHRALIEKSRELKRLELSVKQNGDTLNQLKALNAEQEKDVERVRQREQL 803
            EKAVGDP+LP++HRAL+EKSRELK +E++V++NG+TLNQLKALNAE EKDVERVRQRE+L
Sbjct: 179  EKAVGDPQLPIQHRALVEKSRELKNIEVAVERNGETLNQLKALNAELEKDVERVRQREEL 238

Query: 804  LAKVESMRKKLPWLKYDKVKVDFLQAKEAEKDAEGKMNEAINILNDLNLPVEKQKKLREV 983
            L KVE M+KKLPWLKYD  K ++L+AKE EKDA+ K+ EA+ I+ DL  P++KQKK + +
Sbjct: 239  LEKVEWMKKKLPWLKYDMKKAEYLEAKEQEKDAQKKLEEAVKIMKDLKEPIDKQKKDKSL 298

Query: 984  QDTALKNVSKLIAKNNAKRMERSENESRLGVQVVGSYKEMDELRRQEESRQHRILRAKED 1163
             D+  K V  LI +N  +RME  E E+ L V   G  KEM++L+RQEESRQ RIL+AK D
Sbjct: 299  LDSKCKKVLSLINENTKQRMELLEKENHLEVNFKGKRKEMEDLKRQEESRQQRILKAKND 358

Query: 1164 XXXXXXXXXXXPIFEPPKSEIDNLAAQIRELDFSAKEKASKKSDQEKVLNQKKTTLWQCK 1343
                       P +EPP      L  QI EL FSAKEK  +KS+ EK+L+QK+  L QC 
Sbjct: 359  LTAAEIELRNLPTYEPPTDVFGRLHNQIVELQFSAKEKRLQKSETEKLLDQKRLLLKQCL 418

Query: 1344 ERLADMESIHTKLLEALKRNGAERIFEAYRWVQEHRNEFNKEVFGPVLLEVKIPNREH 1517
            ++L DME    KLL+AL+ +GAE+IF+AY+WV++HRNE   EV+GPVLLEV + +R H
Sbjct: 419  DKLKDMEDTKNKLLQALRNSGAEKIFDAYKWVEQHRNELKAEVYGPVLLEVNVSDRMH 476


>ref|NP_197096.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana]
            gi|9755638|emb|CAC01791.1| putative protein [Arabidopsis
            thaliana] gi|332004841|gb|AED92224.1| structural
            maintenance of chromosomes 5 [Arabidopsis thaliana]
          Length = 1053

 Score =  585 bits (1507), Expect = e-164
 Identities = 291/470 (61%), Positives = 373/470 (79%)
 Frame = +3

Query: 108  VSERSAKRAKLTKRGEDDYMPGNITEIELHNFMTFSQIKCKPGPRLNLVIGPNGSGKSSL 287
            +SER AKR K++ RGEDD++PGNI EIELHNFMTF+ + CKPG RLNLVIGPNGSGKSSL
Sbjct: 1    MSERRAKRPKIS-RGEDDFLPGNIIEIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSL 59

Query: 288  VCAIALGLGGEPQLLGRATSVGAFVKRGEDAGFIRISLRGDTMGEQLTITRQIESKSNKS 467
            VCAIAL LGGEPQLLGRATSVGA+VKRGED+G+++ISLRG+T  E LTI R+I+++ NKS
Sbjct: 60   VCAIALCLGGEPQLLGRATSVGAYVKRGEDSGYVKISLRGNTREENLTIFRKIDTR-NKS 118

Query: 468  EWLFNGKSVPKKDVLEIIKRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPE 647
            EW+FNG +V KKD++EII++FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDP+
Sbjct: 119  EWMFNGSTVSKKDIVEIIQKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQ 178

Query: 648  LPVRHRALIEKSRELKRLELSVKQNGDTLNQLKALNAEQEKDVERVRQREQLLAKVESMR 827
            LPV HRAL+EKSR+LK+LE +V +NG+TLNQLKAL  EQEKDVERVRQRE  L KV+SM+
Sbjct: 179  LPVHHRALVEKSRDLKQLERAVAKNGETLNQLKALVDEQEKDVERVRQRELFLTKVDSMK 238

Query: 828  KKLPWLKYDKVKVDFLQAKEAEKDAEGKMNEAINILNDLNLPVEKQKKLREVQDTALKNV 1007
            KKLPWLKYD  K +++ AK+  K+AE K++EA   LN +  P+EKQKK +   D+  K V
Sbjct: 239  KKLPWLKYDMKKAEYMDAKKRMKEAEKKLDEAAKNLNSMKEPIEKQKKEKAETDSKCKKV 298

Query: 1008 SKLIAKNNAKRMERSENESRLGVQVVGSYKEMDELRRQEESRQHRILRAKEDXXXXXXXX 1187
              L+  N   R    E E     +VV +YKE++EL++QEE RQ RIL+A ED        
Sbjct: 299  KNLMDANGRNRCHLLEKEDEADARVVATYKELEELKKQEEHRQERILKATEDLVAAEREL 358

Query: 1188 XXXPIFEPPKSEIDNLAAQIRELDFSAKEKASKKSDQEKVLNQKKTTLWQCKERLADMES 1367
               P++E P ++++ L++Q+ EL  S   K ++K D EK+L+QK+ TL QC ++L DME+
Sbjct: 359  QNLPVYERPVAKLEELSSQVTELHHSINGKKNQKEDNEKLLSQKRYTLRQCVDKLKDMEN 418

Query: 1368 IHTKLLEALKRNGAERIFEAYRWVQEHRNEFNKEVFGPVLLEVKIPNREH 1517
             + KLL+AL  +GA+RIF+AY+WVQ++R+EF +EV+GPVL+EV +PNRE+
Sbjct: 419  ANNKLLKALANSGADRIFDAYQWVQQNRHEFKREVYGPVLVEVNVPNREN 468