BLASTX nr result

ID: Coptis21_contig00022911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022911
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269798.2| PREDICTED: uncharacterized protein LOC100252...   141   9e-32
gb|EEC72483.1| hypothetical protein OsI_05847 [Oryza sativa Indi...   141   9e-32
gb|EEC72102.1| hypothetical protein OsI_05068 [Oryza sativa Indi...   141   9e-32
ref|NP_001045886.1| Os02g0147700 [Oryza sativa Japonica Group] g...   140   3e-31
ref|XP_003602435.1| DNA-binding protein BIN4 [Medicago truncatul...   130   2e-28

>ref|XP_002269798.2| PREDICTED: uncharacterized protein LOC100252112 [Vitis vinifera]
           gi|302144012|emb|CBI23117.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score =  141 bits (356), Expect = 9e-32
 Identities = 85/186 (45%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
 Frame = +1

Query: 94  PTKAFLSLSSDSEPSPTNSFIEEDDISDNEEPVVEKSNVSKTDKDQEKTILIDSGEDXXX 273
           P  +   LSSDSE  P NS + ED I   E  V + +     +KD    +L ++G++   
Sbjct: 102 PNHSVWKLSSDSESCPDNSSMREDYIHHEESSVHKTTQFPDKEKD---AVLSENGQESLL 158

Query: 274 XXXXXXXXXXXXXXXXXXXXXXXXXXXGD------DVKEEAVKEDIPKKPVEPHVSSRLP 435
                                       D      D   E ++E+   K  EP VSS LP
Sbjct: 159 NEASKEKSPKKRVKVEDHISSKKKKANSDMKGKGHDDGTELLEEEASDKHTEPQVSSGLP 218

Query: 436 LVMSEKVQRSKALVECEGESIDMSGDVGAVGRVVITDDPSGDPEMLLDLKGTIYKTTIVP 615
           LV+SEKV RSKALVECEGESID+SGD+GAVGR+VI D PS + EM LDLKGTIYKTTIVP
Sbjct: 219 LVLSEKVHRSKALVECEGESIDLSGDMGAVGRIVILDTPSRNHEMFLDLKGTIYKTTIVP 278

Query: 616 SRTFCV 633
           SRTFC+
Sbjct: 279 SRTFCI 284


>gb|EEC72483.1| hypothetical protein OsI_05847 [Oryza sativa Indica Group]
          Length = 342

 Score =  141 bits (356), Expect = 9e-32
 Identities = 86/227 (37%), Positives = 118/227 (51%), Gaps = 35/227 (15%)
 Frame = +1

Query: 58  EASPDWLQSFQPPTKAFLSLSSDSEPSPTNS---------------FIEEDDISDNEEPV 192
           E  PDWL++FQPPT + + LSS S+ SP NS                   D   D +   
Sbjct: 5   EEDPDWLRAFQPPTTSTVMLSSGSDDSPENSPTRTTPSGEEQKGENKASSDHAGDGDAAA 64

Query: 193 VEK-------------SNVSKTDKDQEKTILIDSGEDXXXXXXXXXXXXXXXXXXXXXXX 333
           + K             S     DKD++ T+  +S +D                       
Sbjct: 65  LNKGKKATPTRRKTPTSQEDAFDKDEKPTM--ESNQDKPPKRSTPKKKLVKPPSGSNASK 122

Query: 334 XXXXXXXGDDV-------KEEAVKEDIPKKPVEPHVSSRLPLVMSEKVQRSKALVECEGE 492
                   D +       +E   +ED+  K  E  VS RLPL++ +K+QRSKAL+EC+G+
Sbjct: 123 VTGPKAGPDQIDDTLEHQEEGVAEEDMQDKLTEHSVSQRLPLIIPDKIQRSKALIECDGD 182

Query: 493 SIDMSGDVGAVGRVVITDDPSGDPEMLLDLKGTIYKTTIVPSRTFCV 633
           SID+SGDVGAVGR++I++ P+G+ E+LLDLKGTIYK+TIVPSRTFCV
Sbjct: 183 SIDLSGDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTIVPSRTFCV 229


>gb|EEC72102.1| hypothetical protein OsI_05068 [Oryza sativa Indica Group]
          Length = 473

 Score =  141 bits (356), Expect = 9e-32
 Identities = 90/224 (40%), Positives = 120/224 (53%), Gaps = 32/224 (14%)
 Frame = +1

Query: 58  EASPDWLQSFQPPTKAFLSLSSDSEPSPTNS---------------FIEEDDISDNE--- 183
           E  PDWL++FQPPT + + LSSDS  SP NS                   D + D +   
Sbjct: 137 EEDPDWLRAFQPPTTSTVMLSSDSYDSPENSPTRTTPSGEEQKGENKASSDHVGDGDVAS 196

Query: 184 -------EPVVEKSNVSKTD---KDQEKTILIDSGEDXXXXXXXXXXXXXXXXXXXXXXX 333
                   P   K+  S+ D   KD++ T+  +  +                        
Sbjct: 197 PNKGKKATPTRRKTPTSQEDAFGKDEKPTMESNQDKPAKRSTPKKLVKFPSSSNASKVTG 256

Query: 334 XXXXXXXGDDV---KEEAVKE-DIPKKPVEPHVSSRLPLVMSEKVQRSKALVECEGESID 501
                   DD    +EE V E D+  K  E  VS RLPL++ +KVQRSKAL+EC+G+SID
Sbjct: 257 PKAGPDQIDDTLEHREEGVAEVDMQDKLTEHSVSQRLPLIIPDKVQRSKALIECDGDSID 316

Query: 502 MSGDVGAVGRVVITDDPSGDPEMLLDLKGTIYKTTIVPSRTFCV 633
           +SGDVGAVGR+VI++ P+G+ ++LLDLKGTIYK+TIVPSRTFCV
Sbjct: 317 LSGDVGAVGRIVISNSPNGNQDLLLDLKGTIYKSTIVPSRTFCV 360


>ref|NP_001045886.1| Os02g0147700 [Oryza sativa Japonica Group]
           gi|113535417|dbj|BAF07800.1| Os02g0147700 [Oryza sativa
           Japonica Group] gi|215765268|dbj|BAG86965.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222622166|gb|EEE56298.1| hypothetical protein
           OsJ_05371 [Oryza sativa Japonica Group]
          Length = 342

 Score =  140 bits (352), Expect = 3e-31
 Identities = 85/227 (37%), Positives = 118/227 (51%), Gaps = 35/227 (15%)
 Frame = +1

Query: 58  EASPDWLQSFQPPTKAFLSLSSDSEPSPTNS---------------FIEEDDISDNEEPV 192
           E  PDWL++FQPPT + + LSS S+ SP NS                   D   D +   
Sbjct: 5   EEDPDWLRAFQPPTTSTVMLSSGSDDSPENSPTRTTPSGEEQKGENKASSDHAGDGDAAA 64

Query: 193 VEK-------------SNVSKTDKDQEKTILIDSGEDXXXXXXXXXXXXXXXXXXXXXXX 333
           + K             S     DKD++ T+  +S +D                       
Sbjct: 65  LNKGKKATPTRRKTPTSQEDAFDKDEKPTM--ESNQDKPPKRSTPKKKLVKPPSGSNASK 122

Query: 334 XXXXXXXGDDV-------KEEAVKEDIPKKPVEPHVSSRLPLVMSEKVQRSKALVECEGE 492
                   D +       +E   +E++  K  E  VS RLPL++ +K+QRSKAL+EC+G+
Sbjct: 123 VTGPKAGPDQIDDTLEHQEEGVAEEEMQDKLTEHSVSQRLPLIIPDKIQRSKALIECDGD 182

Query: 493 SIDMSGDVGAVGRVVITDDPSGDPEMLLDLKGTIYKTTIVPSRTFCV 633
           SID+SGDVGAVGR++I++ P+G+ E+LLDLKGTIYK+TIVPSRTFCV
Sbjct: 183 SIDLSGDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTIVPSRTFCV 229


>ref|XP_003602435.1| DNA-binding protein BIN4 [Medicago truncatula]
           gi|355491483|gb|AES72686.1| DNA-binding protein BIN4
           [Medicago truncatula]
          Length = 416

 Score =  130 bits (327), Expect = 2e-28
 Identities = 65/94 (69%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
 Frame = +1

Query: 355 GDDVKEEAVKEDIPKKPVEPHVSSR-LPLVMSEKVQRSKALVECEGESIDMSGDVGAVGR 531
           G D   E   E+  +KPVEP+VSS  LPL++SEKV R+KALVEC+G+SID+SGD+GAVGR
Sbjct: 210 GGDGDVEVKDEETFEKPVEPNVSSSILPLMLSEKVHRTKALVECQGDSIDLSGDMGAVGR 269

Query: 532 VVITDDPSGDPEMLLDLKGTIYKTTIVPSRTFCV 633
           V+I+D PSGD EM LDLKGTIYKT+I+PSRTFCV
Sbjct: 270 VIISDSPSGDQEMCLDLKGTIYKTSIIPSRTFCV 303


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