BLASTX nr result

ID: Coptis21_contig00022902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022902
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270028.1| PREDICTED: biogenesis of lysosome-related or...   171   1e-40
gb|AFK45925.1| unknown [Lotus japonicus]                              161   1e-37
gb|AFK45589.1| unknown [Lotus japonicus]                              161   1e-37
ref|XP_003544921.1| PREDICTED: biogenesis of lysosome-related or...   157   2e-36
ref|XP_002517726.1| conserved hypothetical protein [Ricinus comm...   157   2e-36

>ref|XP_002270028.1| PREDICTED: biogenesis of lysosome-related organelles complex 1
           subunit 1 [Vitis vinifera] gi|297745789|emb|CBI15845.3|
           unnamed protein product [Vitis vinifera]
          Length = 149

 Score =  171 bits (433), Expect = 1e-40
 Identities = 84/123 (68%), Positives = 100/123 (81%)
 Frame = +3

Query: 102 PQGLESSLHQLLHDHNQTSLKLQRQXXXXXXXXXXXXIRVSDLLVETVNGGVQESFLNEK 281
           P GLE+SL QL+ DH+QTSLKL+ +            +RVSDLLV+TVNGGVQE+F+NEK
Sbjct: 26  PSGLEASLLQLIQDHHQTSLKLRDETEKAKNDAIRTAMRVSDLLVDTVNGGVQEAFINEK 85

Query: 282 RIELEIRALAATVSRYTKQTDQWLAASHSINSALKEIGDFENWMKIMDYDCKSINVAIRN 461
           RIELE RAL ATV R+ KQT QWLAASH+IN+A+KEIGDFENWMK MD+DC+SIN AIRN
Sbjct: 86  RIELESRALTATVIRFAKQTHQWLAASHAINTAIKEIGDFENWMKTMDFDCRSINAAIRN 145

Query: 462 IYQ 470
           I+Q
Sbjct: 146 IHQ 148


>gb|AFK45925.1| unknown [Lotus japonicus]
          Length = 200

 Score =  161 bits (407), Expect = 1e-37
 Identities = 80/123 (65%), Positives = 95/123 (77%)
 Frame = +3

Query: 102 PQGLESSLHQLLHDHNQTSLKLQRQXXXXXXXXXXXXIRVSDLLVETVNGGVQESFLNEK 281
           P+GLE+SLH LL  H+  SL L                RVSDLLVE VNGGVQ+SF+N+K
Sbjct: 77  PKGLEASLHNLLQIHHHKSLILAHHTEKAKKDAMRKAERVSDLLVEAVNGGVQDSFVNQK 136

Query: 282 RIELEIRALAATVSRYTKQTDQWLAASHSINSALKEIGDFENWMKIMDYDCKSINVAIRN 461
           RIE EIRALA T++R+ KQTDQWLAA+HS+N+ALKEIGDFENWMKIM+YDCKSI  AI+N
Sbjct: 137 RIEHEIRALAVTITRFMKQTDQWLAATHSLNTALKEIGDFENWMKIMEYDCKSITTAIQN 196

Query: 462 IYQ 470
           I+Q
Sbjct: 197 IHQ 199


>gb|AFK45589.1| unknown [Lotus japonicus]
          Length = 135

 Score =  161 bits (407), Expect = 1e-37
 Identities = 80/123 (65%), Positives = 95/123 (77%)
 Frame = +3

Query: 102 PQGLESSLHQLLHDHNQTSLKLQRQXXXXXXXXXXXXIRVSDLLVETVNGGVQESFLNEK 281
           P+GLE+SLH LL  H+  SL L                RVSDLLVE VNGGVQ+SF+N+K
Sbjct: 12  PKGLEASLHNLLQIHHHKSLILAHHTEKAKKDAMRKAERVSDLLVEAVNGGVQDSFVNQK 71

Query: 282 RIELEIRALAATVSRYTKQTDQWLAASHSINSALKEIGDFENWMKIMDYDCKSINVAIRN 461
           RIE EIRALA T++R+ KQTDQWLAA+HS+N+ALKEIGDFENWMKIM+YDCKSI  AI+N
Sbjct: 72  RIEHEIRALAVTITRFMKQTDQWLAATHSLNTALKEIGDFENWMKIMEYDCKSITTAIQN 131

Query: 462 IYQ 470
           I+Q
Sbjct: 132 IHQ 134


>ref|XP_003544921.1| PREDICTED: biogenesis of lysosome-related organelles complex 1
           subunit 1-like [Glycine max]
          Length = 205

 Score =  157 bits (397), Expect = 2e-36
 Identities = 77/123 (62%), Positives = 95/123 (77%)
 Frame = +3

Query: 102 PQGLESSLHQLLHDHNQTSLKLQRQXXXXXXXXXXXXIRVSDLLVETVNGGVQESFLNEK 281
           P+GLE+SL  L+  H+  SL L                RVSDLLVE VNGGVQ+SF+N+K
Sbjct: 13  PKGLEASLQHLIDLHHHKSLVLAHHTDKAKKDAIRKAERVSDLLVEAVNGGVQDSFINQK 72

Query: 282 RIELEIRALAATVSRYTKQTDQWLAASHSINSALKEIGDFENWMKIMDYDCKSINVAIRN 461
           RIELEIR LAAT++R+ KQTDQWLAA+H++N+ALKEIGDFENWMKIM++DCKSI  AI+N
Sbjct: 73  RIELEIRTLAATITRFMKQTDQWLAATHALNTALKEIGDFENWMKIMEFDCKSITTAIQN 132

Query: 462 IYQ 470
           I+Q
Sbjct: 133 IHQ 135


>ref|XP_002517726.1| conserved hypothetical protein [Ricinus communis]
           gi|223543124|gb|EEF44658.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 148

 Score =  157 bits (397), Expect = 2e-36
 Identities = 76/123 (61%), Positives = 94/123 (76%)
 Frame = +3

Query: 102 PQGLESSLHQLLHDHNQTSLKLQRQXXXXXXXXXXXXIRVSDLLVETVNGGVQESFLNEK 281
           P  LE SL QL+ DH+QTSL+L+               +VS LL++ VNGGVQESF+NEK
Sbjct: 26  PGSLEGSLLQLIQDHHQTSLRLRENTEKAKKDAIRKAAKVSGLLMDAVNGGVQESFINEK 85

Query: 282 RIELEIRALAATVSRYTKQTDQWLAASHSINSALKEIGDFENWMKIMDYDCKSINVAIRN 461
           RIE EIRALAATVSR+ +QTD WL A+H+IN+A+KEIGDFENW+K M++DCKSIN AIR 
Sbjct: 86  RIEFEIRALAATVSRFMRQTDHWLTATHAINTAIKEIGDFENWLKTMEFDCKSINAAIRT 145

Query: 462 IYQ 470
           I+Q
Sbjct: 146 IHQ 148


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