BLASTX nr result

ID: Coptis21_contig00022891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022891
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]   290   4e-76
ref|XP_002514782.1| chromatin assembly factor 1, subunit A, puta...   255   9e-66
dbj|BAJ53153.1| JHL23J11.8 [Jatropha curcas]                          246   4e-63
ref|XP_003551692.1| PREDICTED: uncharacterized protein LOC100802...   228   1e-57
ref|XP_004155114.1| PREDICTED: LOW QUALITY PROTEIN: chromatin as...   227   3e-57

>emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]
          Length = 872

 Score =  290 bits (741), Expect = 4e-76
 Identities = 153/304 (50%), Positives = 196/304 (64%), Gaps = 1/304 (0%)
 Frame = +3

Query: 3    IFSLKEDMDTNELQRIQKDAWXXXXXXXXXXXXRHWGIRQKPKAALIKELKLQGSSSGTG 182
            + S K+ +D+ E+++    +W            +HWGIR+KPK  L+KE+KL G      
Sbjct: 398  VLSSKDGIDSEEIRKSHLASWRYSDRSNRK---QHWGIRRKPKTELVKEIKLTG------ 448

Query: 183  VLSNTTIANKNLVRGDGSNSEKVLDGWADNTPDDRLYDSSANCCPTYTQICNRTKKLLQF 362
                    N+ L R +  + EK++DGW + T +DRL+D++A  CP+  Q     K+LLQF
Sbjct: 449  --------NRGLARDNELSIEKIVDGWEETTAEDRLFDTNAYSCPSDAQEVQSNKQLLQF 500

Query: 363  DKSHRPAYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEE 542
            DKSHRPA+YG    KS ++GPRCP KKD  L                 SLSDCDKD+EEE
Sbjct: 501  DKSHRPAFYGIWPKKSQIVGPRCPFKKDXDLDYDIDSDEEWEEEDPGESLSDCDKDDEEE 560

Query: 543  NLMEGNLKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEDDNTRSSPRCNQDLENDE 722
            ++ EG LK DD++ SEDDF VPDGYLSENEGVQVD METD   +  RSSP C  + E++E
Sbjct: 561  SVEEGCLKGDDDE-SEDDFMVPDGYLSENEGVQVDKMETDPTVEEARSSPGCRTEFESEE 619

Query: 723  FRALFRQQKYINNLTEHALQKNQPLIISNLMHEKTQLI-AEDLNGTAKLEHMFLQALSLR 899
            F  L RQQK+++NLTE AL+KNQPLII NLMHEK  L+ AEDL+GT KLE M LQALS+ 
Sbjct: 620  FCVLLRQQKHLHNLTERALRKNQPLIILNLMHEKIPLLMAEDLSGTPKLEQMCLQALSMC 679

Query: 900  PFPG 911
             FPG
Sbjct: 680  AFPG 683


>ref|XP_002514782.1| chromatin assembly factor 1, subunit A, putative [Ricinus communis]
            gi|223545833|gb|EEF47336.1| chromatin assembly factor 1,
            subunit A, putative [Ricinus communis]
          Length = 823

 Score =  255 bits (652), Expect = 9e-66
 Identities = 147/305 (48%), Positives = 181/305 (59%), Gaps = 4/305 (1%)
 Frame = +3

Query: 9    SLKEDMDTNELQRIQKDAWXXXXXXXXXXXXRHWGIRQKPKAALIKELKLQGSSSGTGVL 188
            S  +D+  + + +    +W            +HW IRQKPK  L KELKL G        
Sbjct: 386  SSNDDIGIDNIWKFHLSSWCHMGRSIRSNRKQHWSIRQKPKTELFKELKLTG-------- 437

Query: 189  SNTTIANKNLVRGDGSNSEKVLDGWADNTPDDRLYDSSANCCPTYTQICNRT---KKLLQ 359
                  N++L   D S+ EK++ GW + + DDR      +C         R    K+LLQ
Sbjct: 438  ------NRDLAHDDESSVEKLVSGW-EQSSDDR------SCVMNLESSDARKIQRKQLLQ 484

Query: 360  FDKSHRPAYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEE 539
            FDKSHRPA+YG    KS V+GPR P +K+P L                 SLSDCDKD+EE
Sbjct: 485  FDKSHRPAFYGIWPKKSHVVGPRHPFRKEPDLDYDVDSDEEWEEEDPGESLSDCDKDDEE 544

Query: 540  ENLMEGNLKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEDDNTRSSPRCNQDLEND 719
            ++L EG LK DDED SED FFVPDGYLSENEGV+VD +ETD   D  R +P C Q+LEN+
Sbjct: 545  QSLEEGCLK-DDEDESEDGFFVPDGYLSENEGVEVDRLETDLSVDEARGTPSCKQELENE 603

Query: 720  EFRALFRQQKYINNLTEHALQKNQPLIISNLMHEKTQL-IAEDLNGTAKLEHMFLQALSL 896
            EFR L + QKY+NNLTE AL+KNQPLII NLMHEK  L  A+DL GT K E M L+ALS+
Sbjct: 604  EFRTLLQWQKYLNNLTEIALRKNQPLIILNLMHEKDPLSAAKDLTGTFKSEKMCLEALSM 663

Query: 897  RPFPG 911
            R  PG
Sbjct: 664  RMNPG 668


>dbj|BAJ53153.1| JHL23J11.8 [Jatropha curcas]
          Length = 846

 Score =  246 bits (629), Expect = 4e-63
 Identities = 143/306 (46%), Positives = 180/306 (58%), Gaps = 5/306 (1%)
 Frame = +3

Query: 9    SLKEDMDTNELQRIQKDAWXXXXXXXXXXXXRHWGIRQKPKAALIKELKLQGSSSGTGVL 188
            S  +D+  ++++++   +W            +HW IRQKPK  L KELKL  +       
Sbjct: 401  SSNDDIRIDDIRKLHLSSWHHLGHAIRSNRKQHWSIRQKPKTELFKELKLTTA------- 453

Query: 189  SNTTIANKNLVRGDGSNSEKVLDGWADNTPDDRL----YDSSANCCPTYTQICNRTKKLL 356
                   + L        EK+   W + + DDRL     +SS N      +   R KKLL
Sbjct: 454  -------RELSHDGELIVEKLESEWGEQSSDDRLCATNLESSLN-----DKKWKRRKKLL 501

Query: 357  QFDKSHRPAYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEE 536
            QFDKSHRPA+YG    KS V+GPR P +K+P L                 SLSDCDKD+E
Sbjct: 502  QFDKSHRPAFYGIWPKKSHVVGPRHPFRKEPDLDYDVDSDEEWEEEDPGESLSDCDKDDE 561

Query: 537  EENLMEGNLKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEDDNTRSSPRCNQDLEN 716
            E++L EG  K DDE+ SED FFVPDGYLSENEGVQVD MET+   +  R SP   QD E+
Sbjct: 562  EQSLEEGCSK-DDEEESEDGFFVPDGYLSENEGVQVDRMETELSVEKARGSPSSKQDSES 620

Query: 717  DEFRALFRQQKYINNLTEHALQKNQPLIISNLMHEKTQL-IAEDLNGTAKLEHMFLQALS 893
            +EF  L +QQKY+NN+TE AL+KNQPLII NLMHEK  L +AEDL GT+KLE   L+AL 
Sbjct: 621  EEFCKLLQQQKYLNNVTETALRKNQPLIILNLMHEKVPLFVAEDLTGTSKLEWTCLEALR 680

Query: 894  LRPFPG 911
            +R FPG
Sbjct: 681  VRKFPG 686


>ref|XP_003551692.1| PREDICTED: uncharacterized protein LOC100802884 [Glycine max]
          Length = 838

 Score =  228 bits (581), Expect = 1e-57
 Identities = 135/298 (45%), Positives = 174/298 (58%), Gaps = 1/298 (0%)
 Frame = +3

Query: 21   DMDTNELQRIQKDAWXXXXXXXXXXXXRHWGIRQKPKAALIKELKLQGSSSGTGVLSNTT 200
            D+   ++++ Q  +W            + WG+RQKP+  + KELKL  S+  T V     
Sbjct: 404  DVMLEDIRKTQFSSWRSLGQSLRSNRKQRWGLRQKPRTEVFKELKL--SAIKTAVQDVEL 461

Query: 201  IANKNLVR-GDGSNSEKVLDGWADNTPDDRLYDSSANCCPTYTQICNRTKKLLQFDKSHR 377
               K++ R G+ S+        AD++PD +                +R ++LLQFDKSHR
Sbjct: 462  DTEKHVDRLGECSSDISSCPMNADSSPDAKY---------------SRGRQLLQFDKSHR 506

Query: 378  PAYYGTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEENLMEG 557
            PA+YG    KS V+GPR PL+KDP L                 SLSDCDKDEEE    E 
Sbjct: 507  PAFYGVWPAKSHVVGPRHPLRKDPSLDYDVSSDEEWEEEEPGESLSDCDKDEEE--CQEE 564

Query: 558  NLKIDDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEDDNTRSSPRCNQDLENDEFRALF 737
              K D+E  SED FFVPDGYLSE+EG QVD ME D + D   SSP C  D+E++EF AL 
Sbjct: 565  CTKSDEE--SEDGFFVPDGYLSEDEGAQVDRMEIDDDIDGADSSPSCKNDIESEEFCALL 622

Query: 738  RQQKYINNLTEHALQKNQPLIISNLMHEKTQLIAEDLNGTAKLEHMFLQALSLRPFPG 911
            RQQKY+NNLTEHAL+KNQPLIISNL+++K      +++GT KLE M LQALS+   PG
Sbjct: 623  RQQKYLNNLTEHALRKNQPLIISNLINDKDLSSDHNISGTPKLEQMCLQALSMYVIPG 680


>ref|XP_004155114.1| PREDICTED: LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit
            FAS1-like [Cucumis sativus]
          Length = 831

 Score =  227 bits (579), Expect = 3e-57
 Identities = 130/295 (44%), Positives = 170/295 (57%), Gaps = 3/295 (1%)
 Frame = +3

Query: 36   ELQRIQKDAWXXXXXXXXXXXXRHWGIRQKPKAALIKELKLQGSSSGTGVLSNTTIANKN 215
            +++R    +W            +HWGIR+KPK+ L KELKL               A + 
Sbjct: 398  DIRRQHLSSWRLIGSSIRSRGEKHWGIRRKPKSELFKELKLS--------------AGRE 443

Query: 216  LVRGDGSNSEKVLDGWADNTPDDRLYDSSANCCPTYTQI--CNRTKKLLQFDKSHRPAYY 389
                D    E+++DGW +   D     S    C T   +   NR K+LLQF KS+RPA+Y
Sbjct: 444  SANDDELGEERLVDGWEEQITDAGT--SQTELCSTLLDVRKSNRGKQLLQFAKSYRPAFY 501

Query: 390  GTMSVKSDVIGPRCPLKKDPKLXXXXXXXXXXXXXXXXXSLSDCDKDEEEENLMEGNLKI 569
            G  S KS V+GPR P +KDP L                 SLSDCDKD+EE    EG  K 
Sbjct: 502  GIWSSKSHVVGPRHPFRKDPDLDYDVDSDEEWEEEDPGESLSDCDKDDEESLEEEGCAKA 561

Query: 570  DDEDGSEDDFFVPDGYLSENEGVQVDSMETDTEDDNTRSSPRCNQDLENDEFRALFRQQK 749
            +D++ SED FFVPDGYLSENEGVQ+D M+TD + D  RS+P   QD+E  E  ++ +QQK
Sbjct: 562  EDDEESEDGFFVPDGYLSENEGVQLDRMDTD-DVDEVRSTPSSKQDMEGKELYSVLKQQK 620

Query: 750  YINNLTEHALQKNQPLIISNLMHEKTQLI-AEDLNGTAKLEHMFLQALSLRPFPG 911
            +++N+T  AL+KNQPLII NL+HEK  L+ AEDL+ T+KLE   L ALS+   PG
Sbjct: 621  HLHNMTNLALRKNQPLIILNLLHEKDSLLMAEDLDCTSKLEQTCLAALSMCLMPG 675


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