BLASTX nr result

ID: Coptis21_contig00022866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022866
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21105.3| unnamed protein product [Vitis vinifera]               98   7e-19
ref|XP_002519906.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
ref|XP_003545448.1| PREDICTED: uncharacterized protein LOC100812...    71   1e-10

>emb|CBI21105.3| unnamed protein product [Vitis vinifera]
          Length = 1012

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 68/179 (37%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
 Frame = -1

Query: 520 TGSDHYLGVPSRAASTTIFNRSPDLQGSYQMANL-IRSSETDQTGLHPIVRGNEIGTDLL 344
           +G D    V S  A +T  + +  L  + Q ANL ++SS+  +  +H +V  NE   +  
Sbjct: 149 SGMDFCPIVSSTTAVSTNCSSTSVLHDALQAANLNLQSSDLAKATIHHMVPRNEKVREFS 208

Query: 343 YPVQGWLSSSSSAV-----GRNIQASSNEPICTISAASDQASTFTKGRVLVFCLATXXXX 179
               GW  ++ SA      G NI AS   P    S+  D  +TFT G   VFC  T    
Sbjct: 209 SLKGGWPVNTGSANFGKLHGTNIHASQKRPSEASSSLCDHQATFTSGCPRVFCFGTSGDL 268

Query: 178 XXXXXXXXXXXXXXXXLQMSVSKFCEHSGSCIVNPGDAVRLKSGETIAQWRRIYFPKYG 2
                             MSVSKFCEHS    VNPGDAVR+ SGETIAQWR+ YF K+G
Sbjct: 269 LLSNTGLLGVVCLCHCWHMSVSKFCEHSELRDVNPGDAVRMDSGETIAQWRKQYFQKFG 327


>ref|XP_002519906.1| conserved hypothetical protein [Ricinus communis]
           gi|223540952|gb|EEF42510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 903

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 65/186 (34%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
 Frame = -1

Query: 538 GNHQ-IGTGSDHYLGVPSRAASTTIFNRSPDLQGSYQMANL-IRSSETDQTGLHPIVRGN 365
           G++Q + +G+D    + SRA +T+ F  +         A++ ++ S+  +T LH  V GN
Sbjct: 125 GSYQNMQSGADLCPLISSRATTTSNFGSNSVFPNGLPAASISLQGSDLAKTVLHDAVLGN 184

Query: 364 EIGTDLLYPVQGWLSSSSSAVGRNIQASSNE-----PICTISAASDQASTFTKGRVLVFC 200
           E   D  Y ++G L + S A    +Q  +N+     P+   S+AS  +S F  G   VFC
Sbjct: 185 EKLKDFTY-LRGELHNISDANAIKLQNVNNQMPQKLPLAAESSASINSSRFPSGCPRVFC 243

Query: 199 LATXXXXXXXXXXXXXXXXXXXXLQMSVSKFCEHSGSCIVNPGDAVRLKSGETIAQWRRI 20
           +                        MSVSKFCEHSG   +NPGDA+ + SGETIAQWR++
Sbjct: 244 MDRSGDLLLSNTGLLGILCSCHCFHMSVSKFCEHSGLWNINPGDAIHMDSGETIAQWRKL 303

Query: 19  YFPKYG 2
           YF K+G
Sbjct: 304 YFQKFG 309


>ref|XP_003545448.1| PREDICTED: uncharacterized protein LOC100812602 [Glycine max]
          Length = 1985

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
 Frame = -1

Query: 406 ETDQTGLHPIVRGNEIGTDLLYPVQGWLSSSSSAVGRNIQASSNEPICTIS---AASDQA 236
           ++  T + P + G+E   +  +   G    +  A   N+  S  +   TI+   ++S  A
Sbjct: 116 QSSNTAIQPPIPGSEKARES-FSSPGQCQGTIPASSLNVCCSDIQTTQTIALEPSSSKYA 174

Query: 235 STFTKGRVLVFCLATXXXXXXXXXXXXXXXXXXXXLQMSVSKFCEHSGSCIVNPGDAVRL 56
           + F  G   VFC+                        MSV KFCEHSG   ++PG+AVR+
Sbjct: 175 TPFMSGCPRVFCMGKSGHLLLSNTGLLGIVCSCHCCHMSVLKFCEHSGLHGIDPGEAVRM 234

Query: 55  KSGETIAQWRRIYFPKYG 2
           +SGETI+QW+++YF K+G
Sbjct: 235 ESGETISQWQKLYFLKFG 252


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