BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022861
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi...   191   2e-46
ref|XP_002328495.1| predicted protein [Populus trichocarpa] gi|2...   188   1e-45
ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containi...   184   2e-44
ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containi...   184   2e-44
ref|XP_002884467.1| pentatricopeptide repeat-containing protein ...   147   5e-33

>ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Vitis vinifera]
          Length = 654

 Score =  191 bits (485), Expect = 2e-46
 Identities = 92/146 (63%), Positives = 108/146 (73%)
 Frame = +3

Query: 3   GVEHYGCLVDLLARAGRVSEAKSIIEKMPMNPSGSIWGTLLNVGKANGNVELAETAXXXX 182
           GVEHYGCLVDLL R+GR SE K +IE MPM PS SIWG +L+  +A GN+E+AE A    
Sbjct: 497 GVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNIEIAEIAGKEL 556

Query: 183 XXXXXXXXGGYVLLSNVYAACGRWSYSHKIRELMESRGLKKIAGCSSLVVDGDIHEFMAA 362
                   GGYVLLSN+YA  GRW +S KIRE+MESRG+KK AGCSS+VVDG IHEF+AA
Sbjct: 557 LKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCSSVVVDGIIHEFVAA 616

Query: 363 DKRHPRWLEVYFILSVLNKEMKLSAN 440
           DKRHPRW+E+  IL  L  EMKL  +
Sbjct: 617 DKRHPRWIEIQSILFCLKSEMKLGTD 642


>ref|XP_002328495.1| predicted protein [Populus trichocarpa] gi|222838210|gb|EEE76575.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  188 bits (478), Expect = 1e-45
 Identities = 92/147 (62%), Positives = 111/147 (75%)
 Frame = +3

Query: 3   GVEHYGCLVDLLARAGRVSEAKSIIEKMPMNPSGSIWGTLLNVGKANGNVELAETAXXXX 182
           GVEHYGCLVDLLAR+GR+SEAK II++MPM PS SIWG +LN  +A G+VELAE A    
Sbjct: 432 GVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAMLNACQAQGDVELAEIASREL 491

Query: 183 XXXXXXXXGGYVLLSNVYAACGRWSYSHKIRELMESRGLKKIAGCSSLVVDGDIHEFMAA 362
                   GGY LLSN+YAA GRWSYS KIRE MESRG+KK AGCSS+VVDG +H F++A
Sbjct: 492 LNLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVKKTAGCSSVVVDGVVHNFISA 551

Query: 363 DKRHPRWLEVYFILSVLNKEMKLSANV 443
           DK HP W+++  IL+ L  EMK  A++
Sbjct: 552 DKCHPGWVDISSILNCLKNEMKPGADL 578


>ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  184 bits (468), Expect = 2e-44
 Identities = 87/147 (59%), Positives = 110/147 (74%)
 Frame = +3

Query: 3   GVEHYGCLVDLLARAGRVSEAKSIIEKMPMNPSGSIWGTLLNVGKANGNVELAETAXXXX 182
           GVEHYGCLVDLL R+GR+ +A  +IEKMPM PS SIWG +L+  + + N+ELAE A    
Sbjct: 431 GVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALMEL 490

Query: 183 XXXXXXXXGGYVLLSNVYAACGRWSYSHKIRELMESRGLKKIAGCSSLVVDGDIHEFMAA 362
                   GGY+LLSNVYA CGRWSYS  IRE+M SRG+KKIAGCSS+ VDG +H+F A+
Sbjct: 491 LKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTAS 550

Query: 363 DKRHPRWLEVYFILSVLNKEMKLSANV 443
           +K+HPRW+++  ILS L  EM+L A+V
Sbjct: 551 NKQHPRWMDICSILSFLTNEMRLEADV 577


>ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  184 bits (468), Expect = 2e-44
 Identities = 87/147 (59%), Positives = 110/147 (74%)
 Frame = +3

Query: 3   GVEHYGCLVDLLARAGRVSEAKSIIEKMPMNPSGSIWGTLLNVGKANGNVELAETAXXXX 182
           GVEHYGCLVDLL R+GR+ +A  +IEKMPM PS SIWG +L+  + + N+ELAE A    
Sbjct: 496 GVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALMEL 555

Query: 183 XXXXXXXXGGYVLLSNVYAACGRWSYSHKIRELMESRGLKKIAGCSSLVVDGDIHEFMAA 362
                   GGY+LLSNVYA CGRWSYS  IRE+M SRG+KKIAGCSS+ VDG +H+F A+
Sbjct: 556 LKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTAS 615

Query: 363 DKRHPRWLEVYFILSVLNKEMKLSANV 443
           +K+HPRW+++  ILS L  EM+L A+V
Sbjct: 616 NKQHPRWMDICSILSFLTNEMRLEADV 642


>ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330307|gb|EFH60726.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 657

 Score =  147 bits (370), Expect = 5e-33
 Identities = 77/142 (54%), Positives = 96/142 (67%), Gaps = 2/142 (1%)
 Frame = +3

Query: 9   EHYGCLVDLLARAGRVSEAKSIIE-KMPMNPSGSIWGTLLNVGKANGNVELAETAXXXXX 185
           EHYG LVDLL RAGR+ EAK I++ KMPM PS S+WG++L+  +   ++E AE A     
Sbjct: 505 EHYGSLVDLLCRAGRLEEAKDIVQNKMPMRPSQSMWGSILSACREGEDIETAELALSELL 564

Query: 186 XXXXXXXGGYVLLSNVYAACGRWSYSHKIRELMESRGLKKIAGCSSLVVDGDIHEFMAAD 365
                  GGYVLLSN+YA  GRW YS K RE MESRG+KK AG SS+V    +H F+AA+
Sbjct: 565 KLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMESRGVKKTAGYSSVVGVEGVHSFVAAE 624

Query: 366 KR-HPRWLEVYFILSVLNKEMK 428
           K+ HPRW E+  IL  L+ EMK
Sbjct: 625 KQNHPRWTEIKRILQHLHNEMK 646