BLASTX nr result

ID: Coptis21_contig00022853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022853
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001144389.1| uncharacterized protein LOC100277317 [Zea ma...    63   3e-10
ref|XP_002462273.1| hypothetical protein SORBIDRAFT_02g022900 [S...    63   6e-10
dbj|BAK05978.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-09
gb|EAZ44452.1| hypothetical protein OsJ_29064 [Oryza sativa Japo...    66   3e-09
gb|EAZ08791.1| hypothetical protein OsI_31051 [Oryza sativa Indi...    66   3e-09

>ref|NP_001144389.1| uncharacterized protein LOC100277317 [Zea mays]
           gi|195641398|gb|ACG40167.1| hypothetical protein [Zea
           mays]
          Length = 98

 Score = 63.2 bits (152), Expect(2) = 3e-10
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +2

Query: 44  LIPSAELITRIFAQLDCTDLVHFSLVCKQWYIDSTELREGWKNDYREACYHF 199
           L P A ++ R+F+Q+ C DL+  SLVCKQWY DS ELRE W+ +Y +A   F
Sbjct: 22  LRPPAHVMARVFSQJXCVDLLSCSLVCKQWYRDSAELREDWRMEYLDAWNQF 73



 Score = 26.2 bits (56), Expect(2) = 3e-10
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 198 FGLSLKKETHPQSTSCSLRGLHS 266
           FGLS+ +E  P   +C++R L S
Sbjct: 73  FGLSVTREPQPLCATCAIRSLRS 95


>ref|XP_002462273.1| hypothetical protein SORBIDRAFT_02g022900 [Sorghum bicolor]
           gi|241925650|gb|EER98794.1| hypothetical protein
           SORBIDRAFT_02g022900 [Sorghum bicolor]
          Length = 97

 Score = 63.2 bits (152), Expect(2) = 6e-10
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = +2

Query: 56  AELITRIFAQLDCTDLVHFSLVCKQWYIDSTELREGWKNDYREACYHF 199
           A ++ R+F+QLDC DL+  SLVCKQWY DS ELRE W+ +Y +A   F
Sbjct: 25  AHVMARVFSQLDCVDLLSCSLVCKQWYRDSAELREEWRMEYLDAWNQF 72



 Score = 25.4 bits (54), Expect(2) = 6e-10
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 198 FGLSLKKETHPQSTSCSLRGLHS 266
           FGLS+ +E  P   +C++R L S
Sbjct: 72  FGLSVSREPLPLCATCAIRSLRS 94


>dbj|BAK05978.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 95

 Score = 60.5 bits (145), Expect(2) = 2e-09
 Identities = 25/44 (56%), Positives = 35/44 (79%)
 Frame = +2

Query: 56  AELITRIFAQLDCTDLVHFSLVCKQWYIDSTELREGWKNDYREA 187
           A++I+R+F+QLDC DL+  SLVC+QW  DS ELRE W+ +Y +A
Sbjct: 23  ADVISRVFSQLDCVDLLSCSLVCRQWCRDSAELREEWRMEYMDA 66



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 201 GLSLKKETHPQSTSCSLRGLHSW 269
           GL++K +T     +CS+R L +W
Sbjct: 71  GLNVKSDTRSTCPTCSIRSLRTW 93


>gb|EAZ44452.1| hypothetical protein OsJ_29064 [Oryza sativa Japonica Group]
          Length = 101

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = +2

Query: 56  AELITRIFAQLDCTDLVHFSLVCKQWYIDSTELREGWKNDYREACYHF 199
           A++I R+F+QLDC DL+  SLVC+QWY DS ELRE W+ +Y EA   F
Sbjct: 27  ADVIARVFSQLDCVDLLSCSLVCRQWYRDSAELREEWRKEYMEAWNQF 74


>gb|EAZ08791.1| hypothetical protein OsI_31051 [Oryza sativa Indica Group]
          Length = 102

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = +2

Query: 56  AELITRIFAQLDCTDLVHFSLVCKQWYIDSTELREGWKNDYREACYHF 199
           A++I R+F+QLDC DL+  SLVC+QWY DS ELRE W+ +Y EA   F
Sbjct: 28  ADVIARVFSQLDCVDLLSCSLVCRQWYRDSAELREEWRKEYMEAWNQF 75


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