BLASTX nr result

ID: Coptis21_contig00022846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022846
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173804.1| PREDICTED: EID1-like F-box protein 3-like [C...   139   2e-31
ref|XP_004140217.1| PREDICTED: EID1-like F-box protein 3-like [C...   137   9e-31
emb|CBI32350.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002276328.1| PREDICTED: EID1-like F-box protein 3-like [V...   135   3e-30
gb|AAK56924.1|AF368237_1 circadian clock coupling factor ZGT [Ni...   134   1e-29

>ref|XP_004173804.1| PREDICTED: EID1-like F-box protein 3-like [Cucumis sativus]
          Length = 313

 Score =  139 bits (350), Expect = 2e-31
 Identities = 62/84 (73%), Positives = 71/84 (84%)
 Frame = -1

Query: 458 DDLGVFRGVFRGFMKSKTRDLLIGRKAEFEELIRCPYCGARVWSMTTAKLVPKSAAKRLG 279
           DDLG++RG+FRGFM+SKTR  LI R+   EE  RCPYCGARVWSMTTA+LVPKS A+RLG
Sbjct: 160 DDLGIYRGIFRGFMRSKTRAFLIKREVRLEETTRCPYCGARVWSMTTARLVPKSVARRLG 219

Query: 278 SHHEKLEYFVCVNGHVHGSCLLVP 207
           +H   LEYFVCVNGH+HGSC LVP
Sbjct: 220 THDGGLEYFVCVNGHLHGSCWLVP 243


>ref|XP_004140217.1| PREDICTED: EID1-like F-box protein 3-like [Cucumis sativus]
          Length = 313

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/84 (72%), Positives = 71/84 (84%)
 Frame = -1

Query: 458 DDLGVFRGVFRGFMKSKTRDLLIGRKAEFEELIRCPYCGARVWSMTTAKLVPKSAAKRLG 279
           D+LG++RG+FRGFM+SKTR  LI R+   EE  RCPYCGARVWSMTTA+LVPKS A+RLG
Sbjct: 160 DNLGIYRGIFRGFMRSKTRAFLIKREVRLEETTRCPYCGARVWSMTTARLVPKSVARRLG 219

Query: 278 SHHEKLEYFVCVNGHVHGSCLLVP 207
           +H   LEYFVCVNGH+HGSC LVP
Sbjct: 220 THDGGLEYFVCVNGHLHGSCWLVP 243


>emb|CBI32350.3| unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  135 bits (341), Expect = 3e-30
 Identities = 61/86 (70%), Positives = 73/86 (84%)
 Frame = -1

Query: 464 RFDDLGVFRGVFRGFMKSKTRDLLIGRKAEFEELIRCPYCGARVWSMTTAKLVPKSAAKR 285
           R DDLG++RGVFRGFM+SKTR  LI R+ + EE + CPYCGARVWSMT A+LVPKSAA+R
Sbjct: 120 REDDLGIYRGVFRGFMRSKTRACLIRRQVKLEERVCCPYCGARVWSMTAARLVPKSAARR 179

Query: 284 LGSHHEKLEYFVCVNGHVHGSCLLVP 207
           LG+H   LEYFVC+NGH+HG+C LVP
Sbjct: 180 LGTHDGGLEYFVCLNGHLHGTCWLVP 205


>ref|XP_002276328.1| PREDICTED: EID1-like F-box protein 3-like [Vitis vinifera]
          Length = 300

 Score =  135 bits (341), Expect = 3e-30
 Identities = 61/86 (70%), Positives = 73/86 (84%)
 Frame = -1

Query: 464 RFDDLGVFRGVFRGFMKSKTRDLLIGRKAEFEELIRCPYCGARVWSMTTAKLVPKSAAKR 285
           R DDLG++RGVFRGFM+SKTR  LI R+ + EE + CPYCGARVWSMT A+LVPKSAA+R
Sbjct: 156 REDDLGIYRGVFRGFMRSKTRACLIRRQVKLEERVCCPYCGARVWSMTAARLVPKSAARR 215

Query: 284 LGSHHEKLEYFVCVNGHVHGSCLLVP 207
           LG+H   LEYFVC+NGH+HG+C LVP
Sbjct: 216 LGTHDGGLEYFVCLNGHLHGTCWLVP 241


>gb|AAK56924.1|AF368237_1 circadian clock coupling factor ZGT [Nicotiana tabacum]
          Length = 291

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/84 (72%), Positives = 71/84 (84%)
 Frame = -1

Query: 458 DDLGVFRGVFRGFMKSKTRDLLIGRKAEFEELIRCPYCGARVWSMTTAKLVPKSAAKRLG 279
           DDLG+FRGVF GFM+S+TR  LI R+ E EE I+CP+CGARVWSMT A+LVPKSAA+RLG
Sbjct: 160 DDLGIFRGVFWGFMRSRTRACLIRRQVELEEKIKCPFCGARVWSMTAARLVPKSAARRLG 219

Query: 278 SHHEKLEYFVCVNGHVHGSCLLVP 207
           S    LEYFVCVNGH+HG+C LVP
Sbjct: 220 SMESGLEYFVCVNGHLHGACWLVP 243


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