BLASTX nr result

ID: Coptis21_contig00022832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022832
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327229.1| GRAS family transcription factor [Populus tr...   137   1e-30
ref|XP_002326001.1| GRAS family transcription factor [Populus tr...   134   6e-30
emb|CBI18535.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera]    133   2e-29
emb|CAN77508.1| hypothetical protein VITISV_037741 [Vitis vinifera]   133   2e-29

>ref|XP_002327229.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222835599|gb|EEE74034.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 463

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/96 (71%), Positives = 82/96 (85%)
 Frame = -2

Query: 290 WPSLIQSLSEKATIANQICLRITGFGRSLEELVETESRLVNFANSCRNLTFEFQGVLRGS 111
           WPSLIQSLSEKA+  N+I LRITGFG+S EEL ETESRLV+FA   RNL FEFQG+LRGS
Sbjct: 208 WPSLIQSLSEKASSGNRISLRITGFGKSAEELQETESRLVSFAKGFRNLVFEFQGLLRGS 267

Query: 110 EPIHLRRKKNETVAVNLVFHLHTITNSMHMSSTFKS 3
           + I+LR+KKNETVAVNLVFHL+T+ +S+ +S T KS
Sbjct: 268 KLINLRKKKNETVAVNLVFHLNTLNDSLKISDTLKS 303


>ref|XP_002326001.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222862876|gb|EEF00383.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 463

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/96 (69%), Positives = 81/96 (84%)
 Frame = -2

Query: 290 WPSLIQSLSEKATIANQICLRITGFGRSLEELVETESRLVNFANSCRNLTFEFQGVLRGS 111
           WPSLIQSLSEKA+  N+I LRITGFGR +EEL ETESRL++FA   RNL FEFQG+LRGS
Sbjct: 207 WPSLIQSLSEKASSGNRISLRITGFGRRIEELQETESRLLSFAKGFRNLVFEFQGLLRGS 266

Query: 110 EPIHLRRKKNETVAVNLVFHLHTITNSMHMSSTFKS 3
           +  +LR+KKNETVAVNLVFHL+T+ +S+ +S T KS
Sbjct: 267 KLFNLRKKKNETVAVNLVFHLNTLNDSLKISDTLKS 302


>emb|CBI18535.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/96 (67%), Positives = 82/96 (85%)
 Frame = -2

Query: 290 WPSLIQSLSEKATIANQICLRITGFGRSLEELVETESRLVNFANSCRNLTFEFQGVLRGS 111
           WPSLIQSL+EKAT  N+I LRITGFGRSL+EL ETE+RL++F+ + RNL FEFQG+LRGS
Sbjct: 149 WPSLIQSLAEKATSGNRISLRITGFGRSLDELQETETRLISFSKAFRNLVFEFQGLLRGS 208

Query: 110 EPIHLRRKKNETVAVNLVFHLHTITNSMHMSSTFKS 3
           +  +LR+KKNETVA NLVFHL+T+T+ + +S T KS
Sbjct: 209 KLTNLRKKKNETVAANLVFHLNTLTSFLKISETLKS 244


>ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera]
          Length = 455

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/96 (67%), Positives = 82/96 (85%)
 Frame = -2

Query: 290 WPSLIQSLSEKATIANQICLRITGFGRSLEELVETESRLVNFANSCRNLTFEFQGVLRGS 111
           WPSLIQSL+EKAT  N+I LRITGFGRSL+EL ETE+RL++F+ + RNL FEFQG+LRGS
Sbjct: 201 WPSLIQSLAEKATSGNRISLRITGFGRSLDELQETETRLISFSKAFRNLVFEFQGLLRGS 260

Query: 110 EPIHLRRKKNETVAVNLVFHLHTITNSMHMSSTFKS 3
           +  +LR+KKNETVA NLVFHL+T+T+ + +S T KS
Sbjct: 261 KLTNLRKKKNETVAANLVFHLNTLTSFLKISETLKS 296


>emb|CAN77508.1| hypothetical protein VITISV_037741 [Vitis vinifera]
          Length = 419

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/96 (67%), Positives = 82/96 (85%)
 Frame = -2

Query: 290 WPSLIQSLSEKATIANQICLRITGFGRSLEELVETESRLVNFANSCRNLTFEFQGVLRGS 111
           WPSLIQSL+EKAT  N+I LRITGFGRSL+EL ETE+RL++F+ + RNL FEFQG+LRGS
Sbjct: 201 WPSLIQSLAEKATSGNRISLRITGFGRSLDELQETETRLISFSKAFRNLVFEFQGLLRGS 260

Query: 110 EPIHLRRKKNETVAVNLVFHLHTITNSMHMSSTFKS 3
           +  +LR+KKNETVA NLVFHL+T+T+ + +S T KS
Sbjct: 261 KLTNLRKKKNETVAANLVFHLNTLTSFLKISETLKS 296


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