BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022793
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containi...   344   1e-92
ref|XP_002327307.1| predicted protein [Populus trichocarpa] gi|2...   339   4e-91
ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   326   4e-87
ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containi...   325   8e-87
ref|XP_003610897.1| Pentatricopeptide repeat-containing protein ...   309   4e-82

>ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein At1g71420-like
            [Vitis vinifera]
          Length = 741

 Score =  344 bits (883), Expect = 1e-92
 Identities = 165/241 (68%), Positives = 203/241 (84%), Gaps = 3/241 (1%)
 Frame = -1

Query: 754  QCDHYACMVDILGRAGRLLEAEVLISQMPIKPDFVVWSALIGACRKHGETKMAELASVKL 575
            Q DHYACMVDILGRAG++ EA+ LI +MP++PD VVWSAL+G+CRKHGETK+A+LA+VKL
Sbjct: 501  QLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKL 560

Query: 574  MELEPNSSLGYVLMANIYYSSSRFNNAALIRKEMKGSKVKKEPGLSWIEIGNQVHEFASG 395
             EL+PN+SLGYVLM+NI+ +  RFN A LIR+EM+G  V+KEPGLSWIE+GNQVHEFASG
Sbjct: 561  KELDPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASG 620

Query: 394  GRRHPQRAAIYSELEWLVGRLKEMGYHPEKSLALHDMEEEQKEEMLYYHSEKLALAFALV 215
            G++HP++ AI + LE LV RLK++GY P+ SLALHD+E+E KEE LYYHSEKLALAFAL+
Sbjct: 621  GQQHPEKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALM 680

Query: 214  ---SSARGSSAIRIMKNIRICIDCHNFMKLASDFVRREIVVRDANRFHRFVSGSCSCSDY 44
               S     + I+IMKNIRIC+DCHNFMKLAS+ V  EIVVRD+NRFH F +  CSC+DY
Sbjct: 681  NVGSICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDY 740

Query: 43   W 41
            W
Sbjct: 741  W 741


>ref|XP_002327307.1| predicted protein [Populus trichocarpa] gi|222835677|gb|EEE74112.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  339 bits (869), Expect = 4e-91
 Identities = 165/241 (68%), Positives = 198/241 (82%), Gaps = 3/241 (1%)
 Frame = -1

Query: 754  QCDHYACMVDILGRAGRLLEAEVLISQMPIKPDFVVWSALIGACRKHGETKMAELASVKL 575
            Q DHYACMVDILGRAG LLEA  LIS+MP+KPD VVWSAL+ +CRK+GET++A+LA+ KL
Sbjct: 287  QLDHYACMVDILGRAGLLLEAGELISRMPMKPDSVVWSALLSSCRKYGETQLAKLAADKL 346

Query: 574  MELEPNSSLGYVLMANIYYSSSRFNNAALIRKEMKGSKVKKEPGLSWIEIGNQVHEFASG 395
             ELEP +SLGYV ++NIY S   +N A LIR EM GS+V+KEPGLSWIEI N+VHEFASG
Sbjct: 347  KELEPGNSLGYVQISNIYCSGGSYNEAGLIRDEMNGSRVRKEPGLSWIEIENRVHEFASG 406

Query: 394  GRRHPQRAAIYSELEWLVGRLKEMGYHPEKSLALHDMEEEQKEEMLYYHSEKLALAFALV 215
            GRRHPQR AIY++L  L+G+LK +GY PE SLAL D+EEE K+E LY+HSEKLAL FAL+
Sbjct: 407  GRRHPQREAIYAKLYSLIGQLKGVGYVPETSLALQDIEEEHKQEQLYHHSEKLALVFALM 466

Query: 214  SSAR---GSSAIRIMKNIRICIDCHNFMKLASDFVRREIVVRDANRFHRFVSGSCSCSDY 44
            S      G   IRI+KNIRIC+DCHNFMKLASD +++EIVVRD+NRFH F +  CSC+DY
Sbjct: 467  SEGSLCCGGGVIRIVKNIRICVDCHNFMKLASDLLQKEIVVRDSNRFHHFKNRMCSCNDY 526

Query: 43   W 41
            W
Sbjct: 527  W 527


>ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71420-like [Glycine max]
          Length = 782

 Score =  326 bits (835), Expect = 4e-87
 Identities = 153/241 (63%), Positives = 191/241 (79%), Gaps = 3/241 (1%)
 Frame = -1

Query: 754  QCDHYACMVDILGRAGRLLEAEVLISQMPIKPDFVVWSALIGACRKHGETKMAELASVKL 575
            Q DHY+CMVD+ GRAG++ EAE LI +MP+KPD V+WS+L+G+CRKHGET++A+LA+ K 
Sbjct: 542  QLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKF 601

Query: 574  MELEPNSSLGYVLMANIYYSSSRFNNAALIRKEMKGSKVKKEPGLSWIEIGNQVHEFASG 395
             ELEPN+SLGYV M+NIY S   F  A LIR EM   KV+KEPGLSW+EIG QVHEF SG
Sbjct: 602  KELEPNNSLGYVQMSNIYSSGGSFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQVHEFGSG 661

Query: 394  GRRHPQRAAIYSELEWLVGRLKEMGYHPEKSLALHDMEEEQKEEMLYYHSEKLALAFALV 215
            G+ HP R AI S LE ++G+LKEMGY PE SLAL+D E E KE+ L++HSEK+AL FA++
Sbjct: 662  GQYHPNRGAILSRLEIVIGQLKEMGYVPELSLALYDTEVEHKEDQLFHHSEKMALVFAIM 721

Query: 214  SSAR---GSSAIRIMKNIRICIDCHNFMKLASDFVRREIVVRDANRFHRFVSGSCSCSDY 44
            +      G + I+IMKNIRIC+DCHNFMKLAS   ++EIVVRD+NRFHRF   +CSC+DY
Sbjct: 722  NEGSLPCGGNVIKIMKNIRICVDCHNFMKLASYLFQKEIVVRDSNRFHRFKYATCSCNDY 781

Query: 43   W 41
            W
Sbjct: 782  W 782


>ref|XP_004147123.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71420-like
            [Cucumis sativus] gi|449503335|ref|XP_004161951.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g71420-like [Cucumis sativus]
          Length = 629

 Score =  325 bits (832), Expect = 8e-87
 Identities = 156/239 (65%), Positives = 196/239 (82%), Gaps = 3/239 (1%)
 Frame = -1

Query: 748  DHYACMVDILGRAGRLLEAEVLISQMPIKPDFVVWSALIGACRKHGETKMAELASVKLME 569
            DHYACMVDILGR+G++ EA   IS MPI+PDFVVWS+ +G+CRK+G T +A+LAS KL E
Sbjct: 391  DHYACMVDILGRSGQVQEAHDFISNMPIEPDFVVWSSFLGSCRKYGATGLAKLASYKLKE 450

Query: 568  LEPNSSLGYVLMANIYYSSSRFNNAALIRKEMKGSKVKKEPGLSWIEIGNQVHEFASGGR 389
            L+P++SL YV M+N+Y  +  F  A LIR EM GS+VKKEPGLS +EI NQVHEFASGGR
Sbjct: 451  LDPSNSLAYVQMSNLYCFNGSFYEADLIRMEMTGSRVKKEPGLSRVEIENQVHEFASGGR 510

Query: 388  RHPQRAAIYSELEWLVGRLKEMGYHPEKSLALHDMEEEQKEEMLYYHSEKLALAFALVSS 209
             HPQR  I +ELE L+GRLKE+GY PE SLALHD+E+EQKE+ LY+HSEKLAL F++++ 
Sbjct: 511  CHPQREVICNELEKLIGRLKEIGYVPETSLALHDVEQEQKEQQLYHHSEKLALVFSVMND 570

Query: 208  ---ARGSSAIRIMKNIRICIDCHNFMKLASDFVRREIVVRDANRFHRFVSGSCSCSDYW 41
                R ++ IRIMKNIRIC+DCHNFMKLAS  +++EIV+RD+NRFH F++G CSC+DYW
Sbjct: 571  YNLGRVNNPIRIMKNIRICVDCHNFMKLASRLLQKEIVIRDSNRFHHFMAGLCSCNDYW 629


>ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512232|gb|AES93855.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  309 bits (792), Expect = 4e-82
 Identities = 144/239 (60%), Positives = 185/239 (77%), Gaps = 3/239 (1%)
 Frame = -1

Query: 748  DHYACMVDILGRAGRLLEAEVLISQMPIKPDFVVWSALIGACRKHGETKMAELASVKLME 569
            DHY+CMVD+ GRAG++ EAE LI +MP+KPD V+WS+L+G+CRKHGE  +A+LA+ K   
Sbjct: 536  DHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKV 595

Query: 568  LEPNSSLGYVLMANIYYSSSRFNNAALIRKEMKGSKVKKEPGLSWIEIGNQVHEFASGGR 389
            L+P +SL Y+ M+NIY S   F  A LIRKEM+ SKV+K PGLSW+E+G QVHEF SGG+
Sbjct: 596  LDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQ 655

Query: 388  RHPQRAAIYSELEWLVGRLKEMGYHPEKSLALHDMEEEQKEEMLYYHSEKLALAFALVS- 212
             HP+R AI S LE L+G+LKEMGY PE   ALHD+E E  E+ L++HSEK+AL FA+++ 
Sbjct: 656  HHPKRQAILSRLETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHHSEKMALVFAIMNE 715

Query: 211  --SARGSSAIRIMKNIRICIDCHNFMKLASDFVRREIVVRDANRFHRFVSGSCSCSDYW 41
              S    + I+IMKNIRIC+DCHNFMKLAS   ++EIVVRD+NRFH F   +CSC+DYW
Sbjct: 716  GISPCAGNVIKIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFHHFKYATCSCNDYW 774