BLASTX nr result

ID: Coptis21_contig00022788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022788
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161528.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin...   277   3e-72
ref|XP_004148956.1| PREDICTED: nephrocystin-3-like [Cucumis sati...   277   3e-72
ref|XP_002263867.1| PREDICTED: nephrocystin-3 [Vitis vinifera]        269   6e-70
ref|XP_003542417.1| PREDICTED: nephrocystin-3-like [Glycine max]      259   5e-67
ref|XP_002532368.1| kinesin light chain, putative [Ricinus commu...   259   6e-67

>ref|XP_004161528.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin-3-like [Cucumis
           sativus]
          Length = 634

 Score =  277 bits (708), Expect = 3e-72
 Identities = 149/280 (53%), Positives = 198/280 (70%), Gaps = 11/280 (3%)
 Frame = -3

Query: 807 NLYKNLFTNTSPI------PINQTPSLFSLLLNPKSHQSRNINTLVEKSP----RQRKVK 658
           N   NL +N+SP+      P      LF      +++ SRN++TLVEK P    RQRK+K
Sbjct: 28  NSISNLPSNSSPVSTPNLKPCTINNGLFFKFTRFQANPSRNLDTLVEKRPEISSRQRKLK 87

Query: 657 EKVDIEEEFEAAMSTDDILKAFKSLEAVFDKNDPKYGLACLKVGLHLDNEGEEPETALQF 478
           +K  +EE FE+A + D++ KAFK +E+ F++ D   GLA LK+ L LD EGE+PE  L +
Sbjct: 88  DKSVLEESFESAETVDEMFKAFKEMESAFEEKD--LGLASLKIALKLDREGEDPEQVLLY 145

Query: 477 GLKAFNILDKGD-KNLSIPVAMTLHLMGSASYNLKRFSDSLGYLNKANRLLVKLQSEGCN 301
             +A   LDK D +N S+PVAMTL L+GS +Y+LKRFSDSLGYLN+ANR+L +L+ +G +
Sbjct: 146 ADRALKALDKDDNRNPSLPVAMTLQLIGSVNYSLKRFSDSLGYLNRANRILGQLEEKGYS 205

Query: 300 EKEILLVLHTVQLGLANAKTAMGRNEEALENYRKGLEIKEMALDPESKELGVAYRQVAEA 121
            ++I  VLH V L LAN KTAMGR EEAL N RK LEIKE+ L+ +S+ELG A R +AEA
Sbjct: 206 AEDIRPVLHAVLLELANVKTAMGRREEALSNLRKCLEIKELMLEKDSRELGTANRDLAEA 265

Query: 120 YAAVMNFNDGLPYCLKALKIHKAHLGDNSIEVAHDRRILG 1
           Y A++NF D LP+C+K L+IHK  LG+NS+EVAHDRR+LG
Sbjct: 266 YVAILNFKDALPFCMKGLEIHKKELGNNSVEVAHDRRLLG 305


>ref|XP_004148956.1| PREDICTED: nephrocystin-3-like [Cucumis sativus]
          Length = 634

 Score =  277 bits (708), Expect = 3e-72
 Identities = 149/280 (53%), Positives = 198/280 (70%), Gaps = 11/280 (3%)
 Frame = -3

Query: 807 NLYKNLFTNTSPI------PINQTPSLFSLLLNPKSHQSRNINTLVEKSP----RQRKVK 658
           N   NL +N+SP+      P      LF      +++ SRN++TLVEK P    RQRK+K
Sbjct: 28  NSISNLPSNSSPVSTPNLKPCTINNGLFFKFTRFQANPSRNLDTLVEKRPEISSRQRKLK 87

Query: 657 EKVDIEEEFEAAMSTDDILKAFKSLEAVFDKNDPKYGLACLKVGLHLDNEGEEPETALQF 478
           +K  +EE FE+A + D++ KAFK +E+ F++ D   GLA LK+ L LD EGE+PE  L +
Sbjct: 88  DKSVLEESFESAETVDEMFKAFKEMESAFEEKD--LGLASLKIALKLDREGEDPEQVLLY 145

Query: 477 GLKAFNILDKGD-KNLSIPVAMTLHLMGSASYNLKRFSDSLGYLNKANRLLVKLQSEGCN 301
             +A   LDK D +N S+PVAMTL L+GS +Y+LKRFSDSLGYLN+ANR+L +L+ +G +
Sbjct: 146 ADRALKALDKDDNRNPSLPVAMTLQLIGSVNYSLKRFSDSLGYLNRANRILGQLEEKGYS 205

Query: 300 EKEILLVLHTVQLGLANAKTAMGRNEEALENYRKGLEIKEMALDPESKELGVAYRQVAEA 121
            ++I  VLH V L LAN KTAMGR EEAL N RK LEIKE+ L+ +S+ELG A R +AEA
Sbjct: 206 AEDIRPVLHAVLLELANVKTAMGRREEALSNLRKCLEIKELMLEKDSRELGTANRDLAEA 265

Query: 120 YAAVMNFNDGLPYCLKALKIHKAHLGDNSIEVAHDRRILG 1
           Y A++NF D LP+C+K L+IHK  LG+NS+EVAHDRR+LG
Sbjct: 266 YVAILNFKDALPFCMKGLEIHKKELGNNSVEVAHDRRLLG 305


>ref|XP_002263867.1| PREDICTED: nephrocystin-3 [Vitis vinifera]
          Length = 647

 Score =  269 bits (688), Expect = 6e-70
 Identities = 144/246 (58%), Positives = 184/246 (74%), Gaps = 5/246 (2%)
 Frame = -3

Query: 723 KSHQSRNINTLVEKSP----RQRKVKEKVDIEEEFEAAMSTDDILKAFKSLEAVFDKNDP 556
           +++ SRN+NT  E  P    RQRK+KE+  +EE FE+A ST+ +LKAF+ +E+ FD+ + 
Sbjct: 71  QTNSSRNLNTQSETPPQISSRQRKIKERSQLEETFESATSTESMLKAFQEMESSFDEKE- 129

Query: 555 KYGLACLKVGLHLDNEGEEPETALQFGLKAFNILDKGDKNLSIPVAMTLHLMGSASYNLK 376
             GLA LK+GL +D EGE+PE  L F  +A   LDK DK  S+ VAM L LMGSA+Y+LK
Sbjct: 130 -LGLASLKLGLKMDQEGEDPEKTLAFANRALKALDKNDKP-SLLVAMALQLMGSANYSLK 187

Query: 375 RFSDSLGYLNKANRLLVKLQSEG-CNEKEILLVLHTVQLGLANAKTAMGRNEEALENYRK 199
           RF+DSLGYLN+ANR+L +L+ EG C+  +I  VLH VQL LAN KTA+GR EEAL N  K
Sbjct: 188 RFNDSLGYLNRANRVLGRLEEEGSCSVDDIRPVLHAVQLELANVKTAVGRREEALVNLTK 247

Query: 198 GLEIKEMALDPESKELGVAYRQVAEAYAAVMNFNDGLPYCLKALKIHKAHLGDNSIEVAH 19
            LEIKEM L+ +SKELG AYR +AEA+ AV+NF + LP+CLKAL+IHK  LG NS+EVAH
Sbjct: 248 CLEIKEMTLEKDSKELGAAYRDLAEAHTAVLNFKEALPFCLKALEIHKKQLGHNSVEVAH 307

Query: 18  DRRILG 1
           DRR+LG
Sbjct: 308 DRRLLG 313


>ref|XP_003542417.1| PREDICTED: nephrocystin-3-like [Glycine max]
          Length = 616

 Score =  259 bits (663), Expect = 5e-67
 Identities = 143/273 (52%), Positives = 189/273 (69%), Gaps = 13/273 (4%)
 Frame = -3

Query: 780 TSPIPINQTPSLFSLLLNPKSHQS----RNINTLVEKSP----RQRKVKEKVDIEEEFEA 625
           +S  P N+      LL+ P +  +    RN+ TLV+KS     RQRK+ EK  ++E FE+
Sbjct: 25  SSDAPFNRCTKTHGLLIRPNNKFATTPFRNMETLVQKSSPIPSRQRKIMEKSQLDEAFES 84

Query: 624 AMSTDDILKAFKSLEAVFDKNDPKYGLACLKVGLHLDNEGEEPETALQFGLKAFNILDKG 445
           A +T+++LK F ++E VFD+ +   GLA LK+GL LD+EGE+PE AL F  +A   L+K 
Sbjct: 85  AETTEEMLKVFSNMEGVFDERE--LGLASLKIGLKLDHEGEDPEKALSFANRALKALEKD 142

Query: 444 DKN----LSIPVAMTLHLMGSASYNLKRFSDSLGYLNKANRLLVKLQSEG-CNEKEILLV 280
           + N     S+PVAM L L+GS S++LKRFSDSLGYLN+ANR+L +LQ EG  +  ++  V
Sbjct: 143 NNNNNFPSSLPVAMCLQLLGSVSFSLKRFSDSLGYLNRANRVLGRLQDEGGVSVDDVRPV 202

Query: 279 LHTVQLGLANAKTAMGRNEEALENYRKGLEIKEMALDPESKELGVAYRQVAEAYAAVMNF 100
           LH VQL L+N K A+GR EEALEN RK LEIKEM  + +S ELG   R +AEAY AV+NF
Sbjct: 203 LHAVQLELSNVKNAVGRREEALENLRKCLEIKEMTFEEDSGELGKGNRDLAEAYVAVLNF 262

Query: 99  NDGLPYCLKALKIHKAHLGDNSIEVAHDRRILG 1
            + LPYCLKAL+IH   LG NS+EVAHDR++LG
Sbjct: 263 KEALPYCLKALEIHMKRLGMNSVEVAHDRKLLG 295


>ref|XP_002532368.1| kinesin light chain, putative [Ricinus communis]
           gi|223527924|gb|EEF30011.1| kinesin light chain,
           putative [Ricinus communis]
          Length = 618

 Score =  259 bits (662), Expect = 6e-67
 Identities = 138/243 (56%), Positives = 185/243 (76%), Gaps = 2/243 (0%)
 Frame = -3

Query: 723 KSHQSRNINTLVEKSPRQRKVKEKVDIEEEFEAAMSTDDILKAFKSLEAVFDKNDPKYGL 544
           +++ S +I   ++ S RQRK+KEK  +EE FE+A + D++L+AFK +E  F  N+ + GL
Sbjct: 59  QANPSEDIEKNLQISSRQRKIKEKSQLEEAFESADTADEMLQAFKEMETSF--NEKELGL 116

Query: 543 ACLKVGLHLDNEGEEPETALQFGLKAFNILDKGDKNL-SIPVAMTLHLMGSASYNLKRFS 367
           A LK+GL LD EGE+PE AL F  +A N+LD  D +  S+ VAM L LMGS +Y+LKRF+
Sbjct: 117 ASLKLGLKLDQEGEDPEKALSFATRALNVLDNNDNSKPSLLVAMALQLMGSVNYSLKRFN 176

Query: 366 DSLGYLNKANRLLVKLQSEGC-NEKEILLVLHTVQLGLANAKTAMGRNEEALENYRKGLE 190
           DSLGYL++ANR+L +L+ EG  N ++I  VLH VQL LAN KTAMGR EEALEN RK L+
Sbjct: 177 DSLGYLSRANRVLGRLEEEGISNIEDIKPVLHAVQLELANVKTAMGRREEALENLRKCLQ 236

Query: 189 IKEMALDPESKELGVAYRQVAEAYAAVMNFNDGLPYCLKALKIHKAHLGDNSIEVAHDRR 10
           IKEM L+ +SKELGVA R++AEAY AV+NF + LP+ LKAL+IH++ LG+NS+EVA DR+
Sbjct: 237 IKEMTLEKDSKELGVANRELAEAYVAVLNFKEALPFGLKALEIHRSGLGNNSVEVARDRK 296

Query: 9   ILG 1
           +LG
Sbjct: 297 LLG 299


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