BLASTX nr result

ID: Coptis21_contig00022755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022755
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15053.1| glutamate receptor 2.6 [Solanum lycopersicum]         164   5e-39
ref|XP_002324375.1| glutamate-gated kainate-type ion channel rec...   160   1e-37
gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana...   159   2e-37
ref|XP_002515372.1| glutamate receptor 2 plant, putative [Ricinu...   159   2e-37
dbj|BAL15051.1| glutamate receptor 2.4 [Solanum lycopersicum]         158   4e-37

>dbj|BAL15053.1| glutamate receptor 2.6 [Solanum lycopersicum]
          Length = 908

 Score =  164 bits (416), Expect = 5e-39
 Identities = 73/133 (54%), Positives = 103/133 (77%)
 Frame = -3

Query: 400 SFLSMLMVFIGIFIIVGLMSNYVANLTSTLTRTQLKPTITDFNDLIKHQDFVGYRKGSFI 221
           S L+  ++ I   +++ L S+Y A+LTS LT  +L+PT+ D  +L+  +D+VGY+ GSF+
Sbjct: 590 SNLARFVLIIWFLVLLILTSSYTASLTSMLTVEKLQPTVKDVKELLNSKDYVGYQPGSFV 649

Query: 220 AGLLKRFHFDESRLKTYSTPKECHELLSKGSQNGGVAAVFDEIPYINIFLAKYCSKYTMV 41
            GLL++ +FDE RLK Y+TP+EC ELL+KGS NGG+AAVFDEIPY+ +FLA YC K+T +
Sbjct: 650 VGLLRKMNFDEDRLKAYNTPEECVELLAKGSSNGGIAAVFDEIPYVKLFLANYCLKFTTI 709

Query: 40  GPTHRTDGFGFVF 2
           GPT++TDGFGF F
Sbjct: 710 GPTYKTDGFGFAF 722


>ref|XP_002324375.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865809|gb|EEF02940.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 843

 Score =  160 bits (404), Expect = 1e-37
 Identities = 75/137 (54%), Positives = 101/137 (73%)
 Frame = -3

Query: 412  KKGTSFLSMLMVFIGIFIIVGLMSNYVANLTSTLTRTQLKPTITDFNDLIKHQDFVGYRK 233
            +K  S L+  +V I  F+++ L  +Y A+LTS LT  QL+PT+TD +DLI    +VGY K
Sbjct: 626  EKLVSNLARAVVIIWFFVVLVLTQSYTASLTSLLTVQQLQPTVTDVHDLIMKGGYVGYLK 685

Query: 232  GSFIAGLLKRFHFDESRLKTYSTPKECHELLSKGSQNGGVAAVFDEIPYINIFLAKYCSK 53
            GSF+  +L    FDES+L  Y++P+ECHEL SKGS NGG+AA FDE+PY+ +FL+KYC+K
Sbjct: 686  GSFVREILLGLGFDESKLMMYNSPEECHELFSKGSGNGGIAAAFDEVPYMKLFLSKYCTK 745

Query: 52   YTMVGPTHRTDGFGFVF 2
            YTM+ PT +T GFGFVF
Sbjct: 746  YTMIDPTFKTGGFGFVF 762


>gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum]
          Length = 952

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/134 (53%), Positives = 103/134 (76%)
 Frame = -3

Query: 403  TSFLSMLMVFIGIFIIVGLMSNYVANLTSTLTRTQLKPTITDFNDLIKHQDFVGYRKGSF 224
            TS L+  +V + +F+++ L S+Y A+LTS LT  QL+PTITD NDLIK+ ++VGY+KGSF
Sbjct: 637  TSNLTRFVVIVWVFVVLVLTSSYTASLTSMLTVQQLQPTITDLNDLIKNGEYVGYQKGSF 696

Query: 223  IAGLLKRFHFDESRLKTYSTPKECHELLSKGSQNGGVAAVFDEIPYINIFLAKYCSKYTM 44
            +  +LKR  F+ S+ + YST ++ ++ LS+GS+NGGV A+ DE+PY+ +FL KYC KY M
Sbjct: 697  VEDILKRMKFESSKFRNYSTLEDYNDALSRGSKNGGVGAIVDELPYLRLFLNKYCRKYVM 756

Query: 43   VGPTHRTDGFGFVF 2
            VGPT++T GFGF F
Sbjct: 757  VGPTYKTAGFGFAF 770


>ref|XP_002515372.1| glutamate receptor 2 plant, putative [Ricinus communis]
            gi|223545316|gb|EEF46821.1| glutamate receptor 2 plant,
            putative [Ricinus communis]
          Length = 971

 Score =  159 bits (402), Expect = 2e-37
 Identities = 74/133 (55%), Positives = 102/133 (76%)
 Frame = -3

Query: 400  SFLSMLMVFIGIFIIVGLMSNYVANLTSTLTRTQLKPTITDFNDLIKHQDFVGYRKGSFI 221
            S L+ ++V I  F+++ L+ +Y A+LTS LT  QL PT+TD   LIK+ + VGY++GSF+
Sbjct: 650  SNLARIVVIIWCFVVLILIQSYTASLTSLLTVQQLLPTVTDVYQLIKNGELVGYKRGSFV 709

Query: 220  AGLLKRFHFDESRLKTYSTPKECHELLSKGSQNGGVAAVFDEIPYINIFLAKYCSKYTMV 41
              +LK   F+E++L  Y + ++CHELLSKGS+NGG+AA FDE+PY+ +FLAKYCSKYTMV
Sbjct: 710  PDILKSLGFEETQLVIYDSVEQCHELLSKGSRNGGIAAAFDELPYMKVFLAKYCSKYTMV 769

Query: 40   GPTHRTDGFGFVF 2
             P  +TDGFGFVF
Sbjct: 770  QPITKTDGFGFVF 782


>dbj|BAL15051.1| glutamate receptor 2.4 [Solanum lycopersicum]
          Length = 983

 Score =  158 bits (400), Expect = 4e-37
 Identities = 71/141 (50%), Positives = 106/141 (75%)
 Frame = -3

Query: 424  VTLGKKGTSFLSMLMVFIGIFIIVGLMSNYVANLTSTLTRTQLKPTITDFNDLIKHQDFV 245
            +T  ++ TS  +  ++ + +F+++ L S+Y A+LTS LT  +++PTITD NDLIK  ++V
Sbjct: 651  LTQKERVTSNFTRFVLIVWVFVVLVLTSSYTASLTSMLTAQKIQPTITDLNDLIKRGEYV 710

Query: 244  GYRKGSFIAGLLKRFHFDESRLKTYSTPKECHELLSKGSQNGGVAAVFDEIPYINIFLAK 65
            GY+KGSF+ G+LK   FD ++ ++YST +E ++ LSKGS+NGGV A+ DE+PY+ +FL K
Sbjct: 711  GYQKGSFVRGVLKSMKFDSTKFRSYSTLEEYNDALSKGSKNGGVGAIVDELPYLRLFLNK 770

Query: 64   YCSKYTMVGPTHRTDGFGFVF 2
            YC KY MVGPT++T GFGF F
Sbjct: 771  YCRKYIMVGPTYKTAGFGFAF 791


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