BLASTX nr result

ID: Coptis21_contig00022754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022754
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515372.1| glutamate receptor 2 plant, putative [Ricinu...   189   2e-46
ref|XP_002324375.1| glutamate-gated kainate-type ion channel rec...   188   7e-46
gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana...   188   7e-46
dbj|BAL15050.1| glutamate receptor 2.3 [Solanum lycopersicum]         183   2e-44
emb|CBI23975.3| unnamed protein product [Vitis vinifera]              182   5e-44

>ref|XP_002515372.1| glutamate receptor 2 plant, putative [Ricinus communis]
            gi|223545316|gb|EEF46821.1| glutamate receptor 2 plant,
            putative [Ricinus communis]
          Length = 971

 Score =  189 bits (481), Expect = 2e-46
 Identities = 92/203 (45%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
 Frame = +3

Query: 9    KNKWMLFNPFIEDFRIISFSIALFIFTGFLVWVLEQV--DQIRG--TSQPNSMIVKTITT 176
            KN W+   P   D    SF    F+F GF+VW+LE    ++ RG  + Q ++ +  + +T
Sbjct: 582  KNAWVFLKPLTWDLWATSF--CFFVFIGFIVWILEHRINEEFRGPPSYQLSTSLYFSFST 639

Query: 177  ITLGNIKQVTSFLSKLMVIIWVFIIVGVMSNWVESITSTLTRIQLQPTVTDFNDLIKHGD 356
            +     ++V S L++++VIIW F+++ ++ ++  S+TS LT  QL PTVTD   LIK+G+
Sbjct: 640  MFFAQRERVVSNLARIVVIIWCFVVLILIQSYTASLTSLLTVQQLLPTVTDVYQLIKNGE 699

Query: 357  FVGYRKGSFIADLLKRFHFDKCNLKTYSTPEECHELLSKGSQNGGVAAVFEEIPYINIFL 536
             VGY++GSF+ D+LK   F++  L  Y + E+CHELLSKGS+NGG+AA F+E+PY+ +FL
Sbjct: 700  LVGYKRGSFVPDILKSLGFEETQLVIYDSVEQCHELLSKGSRNGGIAAAFDELPYMKVFL 759

Query: 537  AKYCSEYTMIGPTHRSDGFGFVF 605
            AKYCS+YTM+ P  ++DGFGFVF
Sbjct: 760  AKYCSKYTMVQPITKTDGFGFVF 782


>ref|XP_002324375.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865809|gb|EEF02940.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 843

 Score =  188 bits (477), Expect = 7e-46
 Identities = 93/204 (45%), Positives = 136/204 (66%), Gaps = 4/204 (1%)
 Frame = +3

Query: 6    TKNKWMLFNPFIEDFRIISFSIALFIFTGFLVWVLEQV--DQIRGTS--QPNSMIVKTIT 173
            +KN W+   P   D  + SF    F+F GF+VWVLE    +  RG++  Q  +    + +
Sbjct: 561  SKNAWVFMKPLTWDLWVSSFFF--FLFIGFVVWVLEHRINEDFRGSASDQAGTSFWFSFS 618

Query: 174  TITLGNIKQVTSFLSKLMVIIWVFIIVGVMSNWVESITSTLTRIQLQPTVTDFNDLIKHG 353
            T+     +++ S L++ +VIIW F+++ +  ++  S+TS LT  QLQPTVTD +DLI  G
Sbjct: 619  TMVFAQREKLVSNLARAVVIIWFFVVLVLTQSYTASLTSLLTVQQLQPTVTDVHDLIMKG 678

Query: 354  DFVGYRKGSFIADLLKRFHFDKCNLKTYSTPEECHELLSKGSQNGGVAAVFEEIPYINIF 533
             +VGY KGSF+ ++L    FD+  L  Y++PEECHEL SKGS NGG+AA F+E+PY+ +F
Sbjct: 679  GYVGYLKGSFVREILLGLGFDESKLMMYNSPEECHELFSKGSGNGGIAAAFDEVPYMKLF 738

Query: 534  LAKYCSEYTMIGPTHRSDGFGFVF 605
            L+KYC++YTMI PT ++ GFGFVF
Sbjct: 739  LSKYCTKYTMIDPTFKTGGFGFVF 762


>gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum]
          Length = 952

 Score =  188 bits (477), Expect = 7e-46
 Identities = 90/205 (43%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
 Frame = +3

Query: 3    ETKNKWMLFNPFIEDFRIISFSIALFIFTGFLVWVLEQV--DQIRGTSQPNSMIVK--TI 170
            E KN W+   P   +  + +   A F+F GF+VWVLE       RG  +    +V   + 
Sbjct: 568  ERKNAWIFLKPLKSELWVTTG--AFFVFIGFVVWVLEHRVNKDFRGPKRKQVGMVFWFSF 625

Query: 171  TTITLGNIKQVTSFLSKLMVIIWVFIIVGVMSNWVESITSTLTRIQLQPTVTDFNDLIKH 350
            +T+   + ++VTS L++ +VI+WVF+++ + S++  S+TS LT  QLQPT+TD NDLIK+
Sbjct: 626  STLVFAHKERVTSNLTRFVVIVWVFVVLVLTSSYTASLTSMLTVQQLQPTITDLNDLIKN 685

Query: 351  GDFVGYRKGSFIADLLKRFHFDKCNLKTYSTPEECHELLSKGSQNGGVAAVFEEIPYINI 530
            G++VGY+KGSF+ D+LKR  F+    + YST E+ ++ LS+GS+NGGV A+ +E+PY+ +
Sbjct: 686  GEYVGYQKGSFVEDILKRMKFESSKFRNYSTLEDYNDALSRGSKNGGVGAIVDELPYLRL 745

Query: 531  FLAKYCSEYTMIGPTHRSDGFGFVF 605
            FL KYC +Y M+GPT+++ GFGF F
Sbjct: 746  FLNKYCRKYVMVGPTYKTAGFGFAF 770


>dbj|BAL15050.1| glutamate receptor 2.3 [Solanum lycopersicum]
          Length = 962

 Score =  183 bits (464), Expect = 2e-44
 Identities = 90/205 (43%), Positives = 137/205 (66%), Gaps = 4/205 (1%)
 Frame = +3

Query: 3    ETKNKWMLFNPFIEDFRIISFSIALFIFTGFLVWVLEQV--DQIRGTS--QPNSMIVKTI 170
            + KN W+   P   +  I +   A F+F GF+VWVLE     + RG    Q   +   + 
Sbjct: 579  DRKNAWIFLKPLKAELWIATG--AFFVFIGFVVWVLEHRVNKEFRGPKRKQVGMIFWFSF 636

Query: 171  TTITLGNIKQVTSFLSKLMVIIWVFIIVGVMSNWVESITSTLTRIQLQPTVTDFNDLIKH 350
            +T+   + +++TS LS+ ++I+WVF+++ + S++  S+TS LT  QLQPTVTD NDLIK+
Sbjct: 637  STLVFAHKEKITSNLSRFVLIVWVFVVLVLTSSYTASLTSMLTVQQLQPTVTDLNDLIKN 696

Query: 351  GDFVGYRKGSFIADLLKRFHFDKCNLKTYSTPEECHELLSKGSQNGGVAAVFEEIPYINI 530
            G++VGY+KGSF+ D+L R  FD   L++Y T EE  + LS+GS+NGGV A+ +E+PY+ +
Sbjct: 697  GEYVGYQKGSFVKDVLTRMKFDSSKLRSYRTLEEYDDALSRGSKNGGVGAIVDELPYLRL 756

Query: 531  FLAKYCSEYTMIGPTHRSDGFGFVF 605
            FL K C +Y M+GPT+++ GFGF F
Sbjct: 757  FLNKNCRKYIMVGPTYKAAGFGFAF 781


>emb|CBI23975.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  182 bits (461), Expect = 5e-44
 Identities = 89/204 (43%), Positives = 135/204 (66%), Gaps = 4/204 (1%)
 Frame = +3

Query: 6    TKNKWMLFNPFIEDFRIISFSIALFIFTGFLVWVLEQV--DQIRG--TSQPNSMIVKTIT 173
            +KN W+   P   D  + S     F+F GF++WVLE    +  RG  ++Q  +++  + +
Sbjct: 571  SKNAWVFLKPLTWDLWVTS--ACFFVFIGFVIWVLEHRINEDFRGPRSNQVGTILWFSFS 628

Query: 174  TITLGNIKQVTSFLSKLMVIIWVFIIVGVMSNWVESITSTLTRIQLQPTVTDFNDLIKHG 353
            T+     +++ S L++ +VIIW F+++ +  ++  S+TS LT  QL+PT+TD N+LIK+G
Sbjct: 629  TMVFAQKERIVSNLARFVVIIWFFVVLILTQSYTASLTSMLTVQQLKPTITDINELIKNG 688

Query: 354  DFVGYRKGSFIADLLKRFHFDKCNLKTYSTPEECHELLSKGSQNGGVAAVFEEIPYINIF 533
            + VGY+KGSF+ + LK   FD+  L  Y +PEE  EL S  S +GG+AA FEEIPY+ +F
Sbjct: 689  ERVGYQKGSFVYEFLKWMKFDETKLVIYESPEELDELFSNRSSDGGIAAAFEEIPYVKLF 748

Query: 534  LAKYCSEYTMIGPTHRSDGFGFVF 605
            LAKYCS+YT + PT++ DGFGFVF
Sbjct: 749  LAKYCSKYTAVQPTYKFDGFGFVF 772


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