BLASTX nr result

ID: Coptis21_contig00022717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022717
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]   107   4e-21
gb|AAM62582.1| unknown [Arabidopsis thaliana]                          77   8e-12
ref|NP_564042.1| Aminotransferase-like, plant mobile domain fami...    75   2e-11
ref|XP_002302840.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-11
ref|XP_004143807.1| PREDICTED: serine/threonine-protein phosphat...    74   5e-11

>emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]
          Length = 689

 Score =  107 bits (267), Expect = 4e-21
 Identities = 64/176 (36%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
 Frame = -2

Query: 550 LQNVGFDVFAQ--IDIEKSDRQLVEAIIERWWDSTHTFHFPCGEIGFTPLDFSMLTGLRV 377
           + N GF  F        ++++  V ++ ERWWD+T T HFP GE+G TP DFS++TGLR+
Sbjct: 79  VDNAGFGRFISSLCPSSRAEKVRVISLAERWWDTTGTLHFPFGEVGMTPYDFSVITGLRI 138

Query: 376 GEGKIVAFDS-KYELFDEAVKYLPFLTEDEIYSGSIKLSHLDMYTAFAVQDDVNEREIGF 200
           G GK + +++  +   D+ +K L   +   +  GS+  S L       V +   +RE   
Sbjct: 139 G-GKPIPYNAGVHRSEDDLLKALG--SRPPVIRGSVSCSWLFENFHNVVCNTDRDRECHT 195

Query: 199 RAFMLYVIRNVLLANSHSKVRLGYLASLTQIDEIGSYDWGGAAYTHLIASLDLVCR 32
           RAF+LY+    +      KV L  L +L  +D IG YDWGGAAY  L   ++ V R
Sbjct: 196 RAFILYLFGCTMFGTLDCKVNLNSLPALEDVDRIGEYDWGGAAYAALCTHMNSVSR 251


>gb|AAM62582.1| unknown [Arabidopsis thaliana]
          Length = 478

 Score = 76.6 bits (187), Expect = 8e-12
 Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
 Frame = -2

Query: 553 MLQNVGFDVFAQIDIEKSDRQLVEAIIERWWDSTHTFHFPCGEIGFTPLDFSMLTGLRVG 374
           +++  GF  F  I     +  L+ A++ERW   T+TFHFPCGE+  T  + S++ GL V 
Sbjct: 45  LVEKAGFGWFRLIGSISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVD 104

Query: 373 EGKIVAFDSKYELFDE-AVKYLPFLTEDEIYSGSIKLSHL-DMYTAFAVQDDVNEREIGF 200
              +V    K E   +  +K L  L + E+    +    L + +        + E E   
Sbjct: 105 GKPVVGVKEKDEDPSQVCLKLLGKLPKGELSGNRVTAKWLKESFAECPKGATMKEIEYHT 164

Query: 199 RAFMLYVIRNVLLANSH-SKVRLGYLASLTQIDEIGSYDWGGAAYTHL 59
           RA+++Y++ + + A +  SK+ + YL      ++ G Y WG AA   L
Sbjct: 165 RAYLIYIVGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFL 212


>ref|NP_564042.1| Aminotransferase-like, plant mobile domain family protein
           [Arabidopsis thaliana]
           gi|9665070|gb|AAF97272.1|AC034106_15 Contains similarity
           to a hypothetical protein At2g25010 gi|4559351 from
           Arabidopsis thaliana chromosome II gb|AC006585
           [Arabidopsis thaliana] gi|62320302|dbj|BAD94623.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332191532|gb|AEE29653.1| Aminotransferase-like, plant
           mobile domain family protein [Arabidopsis thaliana]
          Length = 478

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
 Frame = -2

Query: 556 SMLQNVGFDVFAQIDIEKSDRQLVEAIIERWWDSTHTFHFPCGEIGFTPLDFSMLTGLRV 377
           ++++  GF  F  +     +  L+ A++ERW   T+TFHFPCGE+  T  + S++ GL V
Sbjct: 44  ALVEKAGFGWFRLVGSISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAV 103

Query: 376 GEGKIVAFDSKYELFDE-AVKYLPFLTEDEIYSGSIKLSHL-DMYTAFAVQDDVNEREIG 203
               +V    K E   +  ++ L  L + E+    +    L + +        + E E  
Sbjct: 104 DGKPVVGVKEKDEDPSQVCLRLLGKLPKGELSGNRVTAKWLKESFAECPKGATMKEIEYH 163

Query: 202 FRAFMLYVIRNVLLANSH-SKVRLGYLASLTQIDEIGSYDWGGAAYTHL 59
            RA+++Y++ + + A +  SK+ + YL      ++ G Y WG AA   L
Sbjct: 164 TRAYLIYIVGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFL 212


>ref|XP_002302840.1| predicted protein [Populus trichocarpa] gi|222844566|gb|EEE82113.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
 Frame = -2

Query: 553 MLQNVGFDVFAQIDIEKSDRQLVEAIIERWWDSTHTFHFPCGEIGFTPLDFSMLTGLRVG 374
           +++  GF    +I     D  L+ A++ERW   T+TFHF  GE+  T  D ++L GL + 
Sbjct: 43  LVEKAGFGYLRKIPAISLDNPLISALVERWRRETNTFHFTVGEMTVTLQDVALLLGLAI- 101

Query: 373 EGKIVAFDSKYELFDEAVKYLPFLTEDEIYS--GSIKLSHLDMYTAFAVQD-DVNEREIG 203
           +GK V     +       + L     D  Y+  G +KLS L  + +   +D  + E E  
Sbjct: 102 DGKPV-IGITHTTCASVCEGLLGKAPDSSYASGGMVKLSWLKEFFSHCSEDAPIEEVEHC 160

Query: 202 FRAFMLYVIRNVLLA-NSHSKVRLGYLASLTQIDEIGSYDWGGAAYTHLIASLDLVC 35
            RA++LY++ + + +  + +KV + YL      +E G Y WG AA   L  +L   C
Sbjct: 161 TRAYLLYLVGSTIFSTTTGNKVPVMYLPLFAYFEEAGEYAWGAAALAFLYRALGNAC 217


>ref|XP_004143807.1| PREDICTED: serine/threonine-protein phosphatase 7 long form homolog
           [Cucumis sativus]
          Length = 486

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
 Frame = -2

Query: 568 GEFQSMLQNVGFDVFAQIDIEKSDRQLVEAIIERWWDSTHTFHFPCGEIGFTPLDFSMLT 389
           G+   +++  GF     +     D  L+ A++ERW   T+TFHF  GE+  T  D ++L 
Sbjct: 51  GKQIELVEKAGFGYLRLMPAVTLDCALISALVERWRKETNTFHFSVGEMTITLEDVALLL 110

Query: 388 GLRVGEGKIVAFD-SKYELFDEAVKYLPFLTEDEIYSGSIKLSHL-DMYTAFAVQDDVNE 215
           GL +    +   D     L +  +   P       + G++KL+ L ++++       + +
Sbjct: 111 GLSIDGKPVTDVDVDPKSLCENLLGKAP-----TDFKGAVKLTWLKEVFSECPEDAGIEQ 165

Query: 214 REIGFRAFMLYVIRNVLLAN-SHSKVRLGYLASLTQIDEIGSYDWGGAAYTHLIASL 47
            E   RA++LY++ + + A+ S +KV + YL+     DE G Y WG AA   L  +L
Sbjct: 166 IEYSTRAYLLYLLGSTIFASTSGNKVSVMYLSLFKDFDEAGKYAWGAAALAFLYRAL 222


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