BLASTX nr result
ID: Coptis21_contig00022701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00022701
(2022 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28171.3| unnamed protein product [Vitis vinifera] 412 e-112
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera] 394 e-107
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici... 377 e-102
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin... 318 4e-84
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin... 315 2e-83
>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 412 bits (1060), Expect = e-112
Identities = 239/540 (44%), Positives = 321/540 (59%), Gaps = 6/540 (1%)
Frame = -1
Query: 2007 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1828
M+DEL KRNTDCVYFLASPLTCKKG +CEYRHSE ARLNPRDCWYWL+G+CLNP CAFRH
Sbjct: 1 MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60
Query: 1827 PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHGSNINSGQSSK 1648
PPL+G E + EP +L +S PV K+N PCYFY++ FCNKGE CSFLHG + ++G +
Sbjct: 61 PPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNGFCNKGERCSFLHGPD-STGTETG 119
Query: 1647 SASLVANVHPLENKVVTSVNGVTAAIELPRDESQTLTKVVECIQSHSKVECHPSVYNNGL 1468
+ + +E VT++ Q K + V+ N
Sbjct: 120 PTLIGRRPNSVETATVTAIE----------------------TQFQPKEDLQKLVFKNAF 157
Query: 1467 QKSPSPRIAVPGRDD-LTLKSEFLLPAEGIQSPVPVNQSPLCAEQNSDDQFDDHIDPEER 1291
++S SP+I++ ++ ++S+ LLPAEG ++S L +Q+S++Q D I+PEER
Sbjct: 158 EQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQ----SRSLLSTDQSSEEQVDGPIEPEER 213
Query: 1290 WESSPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDPLEFGDS 1111
WESSPGFDVLVD+ SENL YED+PEYLLA + E R L+ Q L YD+ED V YD L + ++
Sbjct: 214 WESSPGFDVLVDNISENLVYEDEPEYLLALEGEGRELNGQFLGYDFEDPVEYD-LMYPEA 272
Query: 1110 GILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLDPMGLPNRQNFPREVDLGVRNGVD 931
ILY+H +Y+S+D L+N++ +D V+ +P SRE +LDP+ R+NFP E+ + R+G+D
Sbjct: 273 EILYDHRIYDSFDCLDNEHSSDHVRNIPGCSRERILDPILPRKRKNFPVELAVTGRSGLD 332
Query: 930 LRNQL-----XXXXXXXXXXXRGSLSHLKEAGQERPGRRHKRQTVHGRLTSEVASNRIGG 766
LR++L R S L +ER R Q + GR SEV N IG
Sbjct: 333 LRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRERRRRHGMDQQLQGRSASEVRKNIIGM 392
Query: 765 RNESDHRSYDSHHRGLSRQTESRYSKTXXXXXXXXXXXXXXXRFSENSRGGSASQNARSP 586
+E++ S + +G R++ S+ SE+SR R
Sbjct: 393 LSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGHSQRQHIS---SEDSR--KPVSRERIS 447
Query: 585 KESITTFTGPKSLAEIKEEKRKTSEIRVSNGSTTNNGRTASQNFEGPKPLREILKDKRRL 406
TTFTGPKSLA+IKEEKRK E G + T S +F+GPKPL EILKDKR+L
Sbjct: 448 TREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMGYSSNTPSADFQGPKPLSEILKDKRKL 507
>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
Length = 554
Score = 394 bits (1011), Expect = e-107
Identities = 242/567 (42%), Positives = 322/567 (56%), Gaps = 31/567 (5%)
Frame = -1
Query: 2007 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1828
M+DEL KRNTDCVYFLASPLTCKKG +CEYRHSE ARLNPRDCWYWL+G+CLNP CAFRH
Sbjct: 1 MEDELQKRNTDCVYFLASPLTCKKGMDCEYRHSEGARLNPRDCWYWLSGSCLNPACAFRH 60
Query: 1827 P-----------------------PLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSS 1717
P PL+G E + EP +L +S PV K+N PCYFY++
Sbjct: 61 PVRVMLKRIQRDSRSGLLEEKVHLPLDGHIEASSEPVTLSHHSSVPVNKTNTPCYFYYNG 120
Query: 1716 FCNKGENCSFLHG--SNINSGQSSKSASLVANVHPLENKVVTSVNGVTAAIELPRDESQT 1543
FCNKGE CSFLHG S+ + +S K+AS V ++ P EN + I + +T
Sbjct: 121 FCNKGERCSFLHGPDSSAPAWKSLKTASEVNDMRPPENNXIAGTETGPTLIGRRPNSVET 180
Query: 1542 LTKVVECIQSHSKVECHPSVYNNGLQKSPSPRIAVPGRDD-LTLKSEFLLPAEGIQSPVP 1366
T Q K + V+ N ++S SP+I++ ++ ++S+ LLPAEG
Sbjct: 181 ATVTAIETQFQPKEDLQKLVFKNAFEQSSSPQISMSEYEEAAAVRSDSLLPAEGFNQ--- 237
Query: 1365 VNQSPLCAEQNSDDQFDDHIDPEERWESSPGFDVLVDDGSENLGYEDDPEYLLAQKRESR 1186
++S L +Q+S++Q D I+PEERWESSPGFDVLVD+ SENL YED+PEYLLA + E R
Sbjct: 238 -SRSLLSTDQSSEEQVDGPIEPEERWESSPGFDVLVDNISENLVYEDEPEYLLALEGEGR 296
Query: 1185 VLHEQLLQYDYEDSVGYDPLEFGDSGILYEHGMYESYDPLENDNIADQVQRVPKRSREMM 1006
L+ Q L YD+ED V YD L + ++ ILY+H +Y+S+D L+N++ +R ++
Sbjct: 297 ELNGQFLGYDFEDPVEYD-LMYPEAEILYDHRIYDSFDCLDNEH---------RREFWIL 346
Query: 1005 LDPMGLPNRQNFPREVDLGVRNGVDLRNQL-----XXXXXXXXXXXRGSLSHLKEAGQER 841
P R+NFP E+ + R+G+DLR++L R S L +ER
Sbjct: 347 FCP---GKRKNFPVELAVTGRSGLDLRDRLRKRRVTDGHTVTRFSRRHDSSCLIGRTRER 403
Query: 840 PGRRHKRQTVHGRLTSEVASNRIGGRNESDHRSYDSHHRGLSRQTESRYSKTXXXXXXXX 661
R Q + GR SEV N IG +E++ S + +G R++ S+
Sbjct: 404 RRRHGMDQQLQGRSASEVRKNIIGMLSENETLSNRGNKQGWVRRSRLPKSRQHYKEKGHS 463
Query: 660 XXXXXXXRFSENSRGGSASQNARSPKESITTFTGPKSLAEIKEEKRKTSEIRVSNGSTTN 481
SE+SR R TTFTGPKSLA+IKEEKRK E G
Sbjct: 464 QRQHIS---SEDSR--KPVSRERISTREYTTFTGPKSLAQIKEEKRKAEENGEGFGKMGY 518
Query: 480 NGRTASQNFEGPKPLREILKDKRRLGS 400
+ T S +F+GPKPL EILKDKR+LGS
Sbjct: 519 SSNTPSADFQGPKPLSEILKDKRKLGS 545
>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536251|gb|EEF37903.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 530
Score = 377 bits (968), Expect = e-102
Identities = 226/544 (41%), Positives = 304/544 (55%), Gaps = 8/544 (1%)
Frame = -1
Query: 2007 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1828
M++++ KRNTDCVYFLASPLTCKKG ECEYRH+EIARLNPRDCWYWLAG+C NPTCAFRH
Sbjct: 3 MEEDIQKRNTDCVYFLASPLTCKKGLECEYRHNEIARLNPRDCWYWLAGDCYNPTCAFRH 62
Query: 1827 PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHGSNINS--GQS 1654
PPLE +E E S +S P K+NVPCYF+F+ FCNKG+ C F+HG NS G+S
Sbjct: 63 PPLEMHAEGPPELSS----SSVPANKTNVPCYFFFNGFCNKGDRCFFMHGPEANSFTGKS 118
Query: 1653 SKSASLVANVHPLENKVVTSVNGVTAAIELPRDESQTLTKVVECIQSHSKVECHPSVYNN 1474
++S + PL++K+ + V+A E+ + S+T K V+ ++ +
Sbjct: 119 GSTSSAIKENIPLDSKISGGNDTVSAPTEVNANPSETAAKAVKDLKLQPYEDFQFPAPEK 178
Query: 1473 GLQKSPSPRIAVPGRDD-LTLKSEFLLPAEGIQSPVPVNQSPLCAEQNSDDQFDDHIDPE 1297
+ +SPSP+IAV ++ + L FLL ++S Q+ +++ DDH++PE
Sbjct: 179 TVMRSPSPQIAVSQSEEAVILNPSFLLKVNSFTE----SRSLAYTTQSPEEEMDDHVEPE 234
Query: 1296 ERWESSPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDPLEFG 1117
ERWESSPGFDVLVDD SENL YEDD EYLL E R + L YD+E+ V YD +
Sbjct: 235 ERWESSPGFDVLVDDKSENLDYEDDQEYLLPLDMEQRDPNNCFLGYDFENLVEYDH-AYH 293
Query: 1116 DSGILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLDPMGLPNRQNFPREVDLGVRNG 937
D+ Y G Y++ D +N +I D V SR + D + R+ E+ + +
Sbjct: 294 DAEDDYGSGKYDNTDFADNVHIFDDVGNDSGLSRNSVTDSLLSQKRKLVAMELSINDQRI 353
Query: 936 VDLRNQLXXXXXXXXXXXRGS-----LSHLKEAGQERPGRRHKRQTVHGRLTSEVASNRI 772
VDLR++L S SHL GQ RPG Q HG+L EV S I
Sbjct: 354 VDLRDRLGKDRAIHGHTVIRSSRRHYSSHLLGHGQGRPG---SNQRPHGKLVLEVKSTAI 410
Query: 771 GGRNESDHRSYDSHHRGLSRQTESRYSKTXXXXXXXXXXXXXXXRFSENSRGGSASQNAR 592
++ + Y + G R + S S+ SE R ++ + R
Sbjct: 411 EPHRKNGSQLYGGNDHGWLRHSRSNRSRQRDKERRLARKQSLS---SEVLRKPASKE--R 465
Query: 591 SPKESITTFTGPKSLAEIKEEKRKTSEIRVSNGSTTNNGRTASQNFEGPKPLREILKDKR 412
++ T FTGPK+LA+IKEEK+K E G T N+ R A+ +FE PKPL EILKDKR
Sbjct: 466 KSSQASTQFTGPKTLAQIKEEKKKAEENGDYTGKTDNSSRMATADFESPKPLSEILKDKR 525
Query: 411 RLGS 400
R S
Sbjct: 526 RPSS 529
>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 524
Score = 318 bits (814), Expect = 4e-84
Identities = 212/547 (38%), Positives = 290/547 (53%), Gaps = 13/547 (2%)
Frame = -1
Query: 2007 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1828
MD + KR TDCVYFLASPLTCKKGAECEYRH+EIARLNPRDCWYWL+G CLNPTCAFRH
Sbjct: 1 MDQDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60
Query: 1827 PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHG--SNINSGQS 1654
PPL+G + ++ E P Q S P K+ VPCYF+F+ CNKG+ CSFLHG +I + +
Sbjct: 61 PPLDGHTGASVPSE--PTQTSLPANKTMVPCYFFFNGSCNKGDRCSFLHGPDDSIFTVKP 118
Query: 1653 SKSASLVANVHPLENKVVTSVNGVTAAIELPRDESQTLTKVVECIQSHSK----VECHPS 1486
K+ + + LENK TS + P D+S K + ++ K +E
Sbjct: 119 VKNDNGSTDALNLENK--TSSGNRIGLVSTPTDQSVAAPKNLSDLKLQPKEDHQLEIPKD 176
Query: 1485 VYNNGLQKSPSPRIAVPGRDDLTLKSEFLLPAEGIQSPVPVNQSPLCAEQNSDDQFDDHI 1306
V G S A ++ +S+ +P +G VP LC EQ+S++Q + HI
Sbjct: 177 VKQQGYYLELS---ASEYKEAAVSRSDSSIPDDGFVHNVP----HLCTEQSSEEQVNSHI 229
Query: 1305 DPEERWES---SPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGY 1135
+PEERWES SPGFDVLV D +NLGYE+D EY+ R+ + L +Q Y+++DSV Y
Sbjct: 230 EPEERWESSPHSPGFDVLVHDEVDNLGYEEDSEYVTVGDRDEQELDDQYFGYEFKDSVEY 289
Query: 1134 DPLEFGDSGILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLDPMGLPNRQNFPREVD 955
D + ++ ILYE Y+ Y L+ I + + R++ LDP R E+
Sbjct: 290 DTI-CPEADILYEQETYDGYRFLDRGLIHANGRTIHAYPRDVFLDPRLSRKRIRMSAEMA 348
Query: 954 LGVRNGVDLRNQLXXXXXXXXXXXRGSLSHLKEAGQERPGRRHKRQTVH----GRLTSEV 787
+N +DLR+ L L R RH+R + RLTS++
Sbjct: 349 AYDKN-LDLRDHLRRRREIKGPPVSNFLRRESSPLMIRKQERHQRHGIEQRPIRRLTSQL 407
Query: 786 ASNRIGGRNESDHRSYDSHHRGLSRQTESRYSKTXXXXXXXXXXXXXXXRFSENSRGGSA 607
+ I E S + HR L R ++++ K S+ SR +
Sbjct: 408 GYSAIDSIGEVGTLSVANKHR-LFRHSQAQQHKPRKHYREKLPKRQFLS--SKISRKPAF 464
Query: 606 SQNARSPKESITTFTGPKSLAEIKEEKRKTSEIRVSNGSTTNNGRTASQNFEGPKPLREI 427
Q R + F+GPK+LAEIKEEK K +E GS + ++ S +F+ PKPL EI
Sbjct: 465 KQ--RGFIHEFSAFSGPKTLAEIKEEKMKKAE-----GSL--HWKSTSTDFQDPKPLSEI 515
Query: 426 LKDKRRL 406
LKDKR +
Sbjct: 516 LKDKRTM 522
>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 526
Score = 315 bits (808), Expect = 2e-83
Identities = 213/546 (39%), Positives = 293/546 (53%), Gaps = 12/546 (2%)
Frame = -1
Query: 2007 MDDELTKRNTDCVYFLASPLTCKKGAECEYRHSEIARLNPRDCWYWLAGNCLNPTCAFRH 1828
MD++ KR TDCVYFLASPLTCKKGAECEYRH+EIARLNPRDCWYWL+G CLNPTCAFRH
Sbjct: 1 MDEDSLKRYTDCVYFLASPLTCKKGAECEYRHNEIARLNPRDCWYWLSGQCLNPTCAFRH 60
Query: 1827 PPLEGRSETTLEPESLPAQASAPVIKSNVPCYFYFSSFCNKGENCSFLHG--SNINSGQS 1654
PPL+G + + E P Q S P K+ VPCYF+F+ FCNKG+ CSFLHG +I + +
Sbjct: 61 PPLDGHTGAPVPSE--PTQTSLPANKTLVPCYFFFNGFCNKGDRCSFLHGPDDSIFNIKP 118
Query: 1653 SKSASLVANVHPLENKVVT-SVNGVTAAIELPRDESQTLTKVVECIQSHSKVECHPSVYN 1477
K+ + + LENK + + GVT+ P D S K + ++ K + +
Sbjct: 119 VKNENGSTDALNLENKAPSGNRTGVTST---PTDRSVAAPKNLSDLKHQPKEDHQLELPK 175
Query: 1476 NGLQKSPSPRI-AVPGRDDLTLKSEFLLPAEGIQSPVPVNQSPLCAEQNSDDQFDDHIDP 1300
N Q+ + A ++ +S+ +P +G VP LC Q+S++Q + HI+P
Sbjct: 176 NVKQQGDYLELSASEYKEAAVSRSDSSIPDDGFVHNVP----HLCTGQSSEEQVNSHIEP 231
Query: 1299 EERWES---SPGFDVLVDDGSENLGYEDDPEYLLAQKRESRVLHEQLLQYDYEDSVGYDP 1129
EE WES SPGFDVLV D ENLGYE+D EYL R+ + L++Q +Y++ D V YD
Sbjct: 232 EEWWESSPHSPGFDVLVHDEVENLGYEEDSEYLPVVDRDEQELNDQYFRYEFIDPVEYDT 291
Query: 1128 LEFGDSGILYEHGMYESYDPLENDNIADQVQRVPKRSREMMLDPMGLPNRQNFPREVDLG 949
+ ++ ILYE Y+ Y L+ D I + V + + LDP+ R E+
Sbjct: 292 I-CPEADILYEQETYDGYRCLDRDLIHVNGRTVHAYATDAFLDPILSRKRIRTSAEMAAY 350
Query: 948 VRNGVDLRNQLXXXXXXXXXXXRGSL-----SHLKEAGQERPGRRHKRQTVHGRLTSEVA 784
+N +DLR+ L G L S L QER R Q RLTS++
Sbjct: 351 DKN-LDLRDHLRRRREVNGPPVTGFLRRQESSPLMVQNQERHLRHGIEQRPSRRLTSQLG 409
Query: 783 SNRIGGRNESDHRSYDSHHRGLSRQTESRYSKTXXXXXXXXXXXXXXXRFSENSRGGSAS 604
+ I E + S + R L RQ++++ + S+ SR
Sbjct: 410 YSAIDSTGEVETLSIGNKRR-LFRQSQAQQHRPRKNYIEKLPKRQFVS--SKISRKPVFK 466
Query: 603 QNARSPKESITTFTGPKSLAEIKEEKRKTSEIRVSNGSTTNNGRTASQNFEGPKPLREIL 424
Q + S TF+GPK+LAEIKEEK K N + + ++ S +F+ PKPL EIL
Sbjct: 467 QRGLIHESS--TFSGPKTLAEIKEEKMK------KNAEGSLHWKSTSTDFQDPKPLSEIL 518
Query: 423 KDKRRL 406
K KR +
Sbjct: 519 KVKRTM 524