BLASTX nr result

ID: Coptis21_contig00022698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022698
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150442.1| PREDICTED: photosystem II 22 kDa protein, ch...   295   9e-78
ref|XP_002300987.1| hypothetical protein POPTRDRAFT_816277 [Popu...   295   9e-78
emb|CAE01809.2| OSJNBa0039K24.28 [Oryza sativa Japonica Group] g...   292   4e-77
ref|NP_001054354.1| Os04g0690800 [Oryza sativa Japonica Group] g...   292   4e-77
emb|CAH68096.1| B0518A01.1 [Oryza sativa Indica Group] gi|116311...   292   4e-77

>ref|XP_004150442.1| PREDICTED: photosystem II 22 kDa protein, chloroplastic-like
           [Cucumis sativus] gi|449529497|ref|XP_004171736.1|
           PREDICTED: photosystem II 22 kDa protein,
           chloroplastic-like [Cucumis sativus]
          Length = 272

 Score =  295 bits (754), Expect = 9e-78
 Identities = 155/194 (79%), Positives = 166/194 (85%), Gaps = 3/194 (1%)
 Frame = -3

Query: 678 VEDXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNIETGIPIYEAE 499
           VED           TKQNELFVGRVAMIGFAAS+LGE ITGKGILAQLN+ETGIPIYEAE
Sbjct: 77  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASILGEAITGKGILAQLNLETGIPIYEAE 136

Query: 498 PXXXXXXXXXXLGAIGALGDRGRFVDD---ATGLEKAVIPAGKSFRSALGLKEGGPIFGF 328
           P          LGAIGALGDRG+F+DD   ATGLE+AVIP GKSFRSALGLKEGGP+FGF
Sbjct: 137 PLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSALGLKEGGPLFGF 196

Query: 327 TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVLFFFIAA 148
           TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINE+EPLVL NV+FFFIAA
Sbjct: 197 TKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAA 256

Query: 147 LNPGNGKFVTDEDE 106
           +NPG GKFVTDE++
Sbjct: 257 VNPGTGKFVTDEED 270


>ref|XP_002300987.1| hypothetical protein POPTRDRAFT_816277 [Populus trichocarpa]
           gi|118488707|gb|ABK96164.1| unknown [Populus
           trichocarpa] gi|222842713|gb|EEE80260.1| hypothetical
           protein POPTRDRAFT_816277 [Populus trichocarpa]
          Length = 272

 Score =  295 bits (754), Expect = 9e-78
 Identities = 155/192 (80%), Positives = 164/192 (85%), Gaps = 1/192 (0%)
 Frame = -3

Query: 678 VEDXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNIETGIPIYEAE 499
           VED           TKQNELFVGRVAMIGFAASLLGE ITGKGIL+QLN+ETGIPIYEAE
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILSQLNLETGIPIYEAE 139

Query: 498 PXXXXXXXXXXLGAIGALGDRGRFVDD-ATGLEKAVIPAGKSFRSALGLKEGGPIFGFTK 322
           P          LGAIGALGDRGRFVDD  TG+E AVIP GKSFR+ALGLKEGGP+FGFTK
Sbjct: 140 PLLLFFILFTLLGAIGALGDRGRFVDDPTTGIEGAVIPPGKSFRAALGLKEGGPLFGFTK 199

Query: 321 ANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVLFFFIAALN 142
           +NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+P+NE+EPLVLFNVLFFFIAALN
Sbjct: 200 SNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPVNEIEPLVLFNVLFFFIAALN 259

Query: 141 PGNGKFVTDEDE 106
           PG GKFVTDEDE
Sbjct: 260 PGTGKFVTDEDE 271


>emb|CAE01809.2| OSJNBa0039K24.28 [Oryza sativa Japonica Group]
           gi|125592162|gb|EAZ32512.1| hypothetical protein
           OsJ_16732 [Oryza sativa Japonica Group]
          Length = 248

 Score =  292 bits (748), Expect = 4e-77
 Identities = 149/191 (78%), Positives = 163/191 (85%)
 Frame = -3

Query: 678 VEDXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNIETGIPIYEAE 499
           VED           TK+NELFVGRVAM+GFAASLLGE +TGKGILAQLN+ETGIPIYEAE
Sbjct: 56  VEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAVTGKGILAQLNLETGIPIYEAE 115

Query: 498 PXXXXXXXXXXLGAIGALGDRGRFVDDATGLEKAVIPAGKSFRSALGLKEGGPIFGFTKA 319
           P          LGAIGALGDRGRFVDDATGLE+AVIP GK FR+ALGL EGGP+FGFTKA
Sbjct: 116 PLLLFFILFTLLGAIGALGDRGRFVDDATGLERAVIPPGKGFRAALGLSEGGPLFGFTKA 175

Query: 318 NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVLFFFIAALNP 139
           NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETGVPINE+EPL+LFN+LFFF AA+NP
Sbjct: 176 NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAINP 235

Query: 138 GNGKFVTDEDE 106
           G GKFVTD+++
Sbjct: 236 GTGKFVTDDND 246


>ref|NP_001054354.1| Os04g0690800 [Oryza sativa Japonica Group]
           gi|113565925|dbj|BAF16268.1| Os04g0690800 [Oryza sativa
           Japonica Group]
          Length = 254

 Score =  292 bits (748), Expect = 4e-77
 Identities = 149/191 (78%), Positives = 163/191 (85%)
 Frame = -3

Query: 678 VEDXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNIETGIPIYEAE 499
           VED           TK+NELFVGRVAM+GFAASLLGE +TGKGILAQLN+ETGIPIYEAE
Sbjct: 62  VEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAVTGKGILAQLNLETGIPIYEAE 121

Query: 498 PXXXXXXXXXXLGAIGALGDRGRFVDDATGLEKAVIPAGKSFRSALGLKEGGPIFGFTKA 319
           P          LGAIGALGDRGRFVDDATGLE+AVIP GK FR+ALGL EGGP+FGFTKA
Sbjct: 122 PLLLFFILFTLLGAIGALGDRGRFVDDATGLERAVIPPGKGFRAALGLSEGGPLFGFTKA 181

Query: 318 NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVLFFFIAALNP 139
           NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETGVPINE+EPL+LFN+LFFF AA+NP
Sbjct: 182 NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAINP 241

Query: 138 GNGKFVTDEDE 106
           G GKFVTD+++
Sbjct: 242 GTGKFVTDDND 252


>emb|CAH68096.1| B0518A01.1 [Oryza sativa Indica Group] gi|116311997|emb|CAJ86355.1|
           H0814G11.22 [Oryza sativa Indica Group]
           gi|125550332|gb|EAY96154.1| hypothetical protein
           OsI_18034 [Oryza sativa Indica Group]
          Length = 248

 Score =  292 bits (748), Expect = 4e-77
 Identities = 149/191 (78%), Positives = 163/191 (85%)
 Frame = -3

Query: 678 VEDXXXXXXXXXXXTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNIETGIPIYEAE 499
           VED           TK+NELFVGRVAM+GFAASLLGE +TGKGILAQLN+ETGIPIYEAE
Sbjct: 56  VEDGIFGTSGGIGFTKENELFVGRVAMLGFAASLLGEAVTGKGILAQLNLETGIPIYEAE 115

Query: 498 PXXXXXXXXXXLGAIGALGDRGRFVDDATGLEKAVIPAGKSFRSALGLKEGGPIFGFTKA 319
           P          LGAIGALGDRGRFVDDATGLE+AVIP GK FR+ALGL EGGP+FGFTKA
Sbjct: 116 PLLLFFILFTLLGAIGALGDRGRFVDDATGLERAVIPPGKGFRAALGLSEGGPLFGFTKA 175

Query: 318 NELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINELEPLVLFNVLFFFIAALNP 139
           NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETGVPINE+EPL+LFN+LFFF AA+NP
Sbjct: 176 NELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGVPINEIEPLLLFNILFFFFAAINP 235

Query: 138 GNGKFVTDEDE 106
           G GKFVTD+++
Sbjct: 236 GTGKFVTDDND 246


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