BLASTX nr result

ID: Coptis21_contig00022696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022696
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520006.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
ref|XP_004146884.1| PREDICTED: altered inheritance rate of mitoc...    84   9e-15
ref|XP_002275133.2| PREDICTED: altered inheritance rate of mitoc...    84   9e-15
emb|CAN68431.1| hypothetical protein VITISV_019219 [Vitis vinifera]    84   9e-15
ref|XP_002321615.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14

>ref|XP_002520006.1| conserved hypothetical protein [Ricinus communis]
           gi|223540770|gb|EEF42330.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 400

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/118 (44%), Positives = 67/118 (56%), Gaps = 10/118 (8%)
 Frame = -2

Query: 325 LSRNYIVKNWLADMPRENNARHLRKK----RNAQTSRTLSSHASGAHDIS---TGEXXXX 167
           L+RN + + W+ D   E   R  RKK     N  +      H    H I+   +G     
Sbjct: 86  LNRNLLAQLWIEDKKLEKLIRKRRKKIAKHDNHGSDAVYDRHRFFQHPIARQFSGGNMRE 145

Query: 166 XXXXPL---SQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYA 2
                L   SQS +  LKP SPEE K+APLLAR+NL++TR+IEWANL++GFEQENRYA
Sbjct: 146 ERSFDLPPPSQSVSAFLKPNSPEEAKIAPLLARSNLLITRDIEWANLVLGFEQENRYA 203


>ref|XP_004146884.1| PREDICTED: altered inheritance rate of mitochondria protein 25-like
           [Cucumis sativus] gi|449518823|ref|XP_004166435.1|
           PREDICTED: altered inheritance rate of mitochondria
           protein 25-like [Cucumis sativus]
          Length = 366

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 9/117 (7%)
 Frame = -2

Query: 325 LSRNYIVKNWLADMPRENNARHLRKKRNAQTSRTLSSHASGAHDIS---------TGEXX 173
           + R+++ K W AD   E +    ++ R     R  + +  G +D +         T    
Sbjct: 53  IDRSFLAKLWEADRKLEGSREKRKRHRIGNYDRNGTQNRIGQYDRTPFGKPTLDATFVEG 112

Query: 172 XXXXXXPLSQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYA 2
                 P SQS +G L+P SPEE +VAPLLAR+NL++TR+IEWANL+ GFEQENRYA
Sbjct: 113 KPWKQPPPSQSVSGFLEPHSPEEVRVAPLLARSNLLITRDIEWANLVFGFEQENRYA 169


>ref|XP_002275133.2| PREDICTED: altered inheritance rate of mitochondria protein 25-like
           [Vitis vinifera] gi|297737362|emb|CBI26563.3| unnamed
           protein product [Vitis vinifera]
          Length = 412

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 17/125 (13%)
 Frame = -2

Query: 325 LSRNYIVKNWLADMPRENNARHLRKKRNAQTS--------RTLSSH---------ASGAH 197
           + R+++V+ W+ D  +   +R  RK++  +            LSS          AS   
Sbjct: 92  MDRDFLVQLWVVDR-KAKGSRGKRKRKTVKYGADSEIVYGNQLSSQFPFGRWFSGASVTK 150

Query: 196 DISTGEXXXXXXXXPLSQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQ 17
           +  + +        PLSQS TG L+P SPEE +VAPLLAR+NL++TR+IEWANL++GFEQ
Sbjct: 151 EKPSEQEKPVLKQPPLSQSVTGFLEPASPEEARVAPLLARSNLLITRDIEWANLVLGFEQ 210

Query: 16  ENRYA 2
           ENRYA
Sbjct: 211 ENRYA 215


>emb|CAN68431.1| hypothetical protein VITISV_019219 [Vitis vinifera]
          Length = 421

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 52/125 (41%), Positives = 74/125 (59%), Gaps = 17/125 (13%)
 Frame = -2

Query: 325 LSRNYIVKNWLADMPRENNARHLRKKRNAQTS--------RTLSSH---------ASGAH 197
           + R+++V+ W+ D  +   +R  RK++  +            LSS          AS   
Sbjct: 110 MDRDFLVQLWVVDR-KAKGSRGKRKRKTVKYGADSEIVYGNQLSSQFPFGRWFSGASVTK 168

Query: 196 DISTGEXXXXXXXXPLSQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQ 17
           +  + +        PLSQS TG L+P SPEE +VAPLLAR+NL++TR+IEWANL++GFEQ
Sbjct: 169 EKPSEQEKPVXKQPPLSQSVTGFLEPASPEEARVAPLLARSNLLITRDIEWANLVLGFEQ 228

Query: 16  ENRYA 2
           ENRYA
Sbjct: 229 ENRYA 233


>ref|XP_002321615.1| predicted protein [Populus trichocarpa] gi|222868611|gb|EEF05742.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
 Frame = -2

Query: 325 LSRNYIVKNWLADMPRENNARHLRKKRNAQTSRTLSSHASGAHDISTG----EXXXXXXX 158
           LSR ++ + W+AD   E       K++  Q     S  A+ A+D                
Sbjct: 41  LSRKFLAQLWVADKEMEK----FSKRKTTQKKIVKSKAAAAAYDSHPVGKWFSDATVTEN 96

Query: 157 XPLSQSATGLLKPTSPEEFKVAPLLARANLIVTRNIEWANLMVGFEQENRYA 2
              SQS +G  +P  PEE +VAPLLAR+NL++TR+IEWANL++GFEQENRYA
Sbjct: 97  PTRSQSLSGFFEPGFPEEARVAPLLARSNLLITRDIEWANLVLGFEQENRYA 148


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