BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022688
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614694.1| F-box/kelch-repeat protein [Medicago truncat...    61   2e-07
ref|XP_003614689.1| F-box/kelch-repeat protein [Medicago truncat...    60   3e-07
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    60   3e-07
ref|XP_003610841.1| F-box/kelch-repeat protein [Medicago truncat...    59   8e-07
ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, ...    59   8e-07

>ref|XP_003614694.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516029|gb|AES97652.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 396

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/146 (28%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
 Frame = -1

Query: 474 GSFGRLLCM--YHLDKGY--FTISDLETATYKKIPFDLGEYQRYVWRIHTDIFGFWYDGN 307
           GS   ++C+  YH+ + +  + + +     +K++P    ++  Y  ++H    GF +D  
Sbjct: 142 GSCNGIICVAEYHIYERFVIYRLWNPSIRKFKELPPLELQHTGYNLQMH----GFGHDPI 197

Query: 306 TRDFKIVMIEFAVGGAVNV-IVYSLGNNLWRRIHENIPYKGFD-HDSSGLYVNGVIYWVA 133
           + ++K+V++ F      +V +++++G N+W+ I E   Y GF     SG YVNG I W+A
Sbjct: 198 SDNYKVVVV-FRDHNKTDVKVLHNVGTNIWKDIKETFQYDGFIVEQKSGKYVNGAINWLA 256

Query: 132 SNTVDVSKKLILAFDCGNYDIYELLL 55
           S      ++ I +FD GN    ++LL
Sbjct: 257 SKDYSKGQRFIASFDLGNESYKKVLL 282


>ref|XP_003614689.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516024|gb|AES97647.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 518

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 41/146 (28%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
 Frame = -1

Query: 474 GSFGRLLCM--YHLDKGY--FTISDLETATYKKIPFDLGEYQRYVWRIHTDIFGFWYDGN 307
           GS   ++C+  YH+ + +  + + +     +K++P    ++  Y +++H    GF +D  
Sbjct: 142 GSCNGIICVAEYHIYERFAIYRLWNPSIRKFKELPPLELQHAGYNFQMH----GFGHDPI 197

Query: 306 TRDFKIVMIEFAVGGAVNV-IVYSLGNNLWRRIHENIPYKGFD-HDSSGLYVNGVIYWVA 133
           + ++K+V++ F      +V +V+++G N W+ I E   Y  F     SG YVNG I W+A
Sbjct: 198 SDNYKVVVV-FRDNNKTDVKVVHNVGTNFWKDIKETFQYDRFIVEQKSGKYVNGTINWLA 256

Query: 132 SNTVDVSKKLILAFDCGNYDIYELLL 55
           S      ++ I +FD GN    ++LL
Sbjct: 257 SKDYSKGQRFIASFDLGNESYKKVLL 282


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
 Frame = -1

Query: 483 KIFGSFGRLLCMYHLDKGYFTISDLETATYKKIPFDLGEYQRYVWRIHTDI--FGFWYDG 310
           K+ GS   LLC+ ++      + +  T  ++ +PF   E +RY       +  FGF YD 
Sbjct: 97  KVLGSVNGLLCISNVVDD-IAVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDS 155

Query: 309 NTRDFKIVMI-EFAVGG----AVNVIVYSLGNNLWRRIHENIPYKGFDHDSSGLYVNGVI 145
              D+K+V I +F  GG       V VYSL    WRRI + +PY      ++G++ NG +
Sbjct: 156 VRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGD-MPYCVHYPGANGVFANGAL 214

Query: 144 YWVASNTVDVS-KKLILAFDCGNYDIYELL 58
           +WV     + +   +++A D G  D  E+L
Sbjct: 215 HWVVGENPESNVANIVVALDLGVEDYREVL 244


>ref|XP_003610841.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355512176|gb|AES93799.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 399

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
 Frame = -1

Query: 486 CKIFGSFGRLLCMYHLDKGYFTISDLETATYKKIPF------DLGEYQRYVWRIHTDIFG 325
           C I GS   +LC+ +  K  F + +     ++++P          +Y+++  +  T+ F 
Sbjct: 125 CFIIGSCNGILCIANDSKDLFILWNPTIRKFRELPLLKKPQEFSHKYRQFCIKPQTE-FS 183

Query: 324 FWYDGNTRDFKIVMI---EFAVGGAVNVI---VYSLGNNLWRRIHEN----IPYKGFDHD 175
           F YD  T ++K++++     ++G  VN I   +++LG N WR I +     +PY      
Sbjct: 184 FGYDCLTDNYKVIVVLKYHKSIGRWVNKIELKLHTLGTNFWRSIKKFPFGVLPYDMSGKL 243

Query: 174 SSGLYVNGVIYWVASNTVDVSKKLILAFDCGNYDIYELLLRNSG 43
            SG +V G I W+A      +   I+AFD G     ++LL N G
Sbjct: 244 VSGKFVGGAISWLAFKPYPRTSCFIVAFDLGKESYQKVLLPNRG 287


>ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, partial [Medicago
           truncatula] gi|355504317|gb|AES85520.1| Nuclear
           transcription factor Y subunit A-7, partial [Medicago
           truncatula]
          Length = 455

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
 Frame = -1

Query: 579 SSFHLRPTILRVPSPRASLTFPLDLQTTLETCKIFGSFGRLLCMYHLDKGYFTISDLETA 400
           S++ L      V S    L +PL+ +       I GS   +LC + LD+ +  + +    
Sbjct: 115 SAYPLSSFFTDVTSTATQLDYPLNNRIRNLFDLIVGSCHGILC-FALDQRFALLWNPSIK 173

Query: 399 TYKKIPFDLGEYQRYVWRIHTDIFGFWYDGNTRDFKIVMI---EFAVGG-AVNVIVYSLG 232
            + K P  L   +R        I+GF YD     +K+V +   E   G     V V++LG
Sbjct: 174 KFTKSP-SLDNPKRDG---SYTIYGFGYDHVNDIYKVVAVYCFESDNGDYKTQVKVHTLG 229

Query: 231 NNLWRRIHENIPYKGFDHDSSGLYVNGVIYWVASNTVDVSKKLILAFDCGNYDIYELLLR 52
            N WRRIH+ +P+ G   D SG +V+G + W+ASN    +  +I++ D       ELL  
Sbjct: 230 TNFWRRIHD-LPF-GVPFDESGKFVSGTVNWLASNDSSYTSSIIVSLDLEKETYQELLQP 287

Query: 51  NSG 43
           + G
Sbjct: 288 DYG 290