BLASTX nr result

ID: Coptis21_contig00022676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022676
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22452.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002300272.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>emb|CBI22452.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
 Frame = -3

Query: 559 HFDDDK--LCPDVTQKKLTSFIVAGNATAKVESNDSLMXXXXXXSHTITNTEKGVPINAY 386
           HF++DK     D TQK L +FI++G+A+ K     SL+      SH + + E  + I+ +
Sbjct: 439 HFNEDKDGHLSDPTQKTLANFIISGDASGKNVCEHSLLGSDTSDSHFMVDPENDLSIDNH 498

Query: 385 RS--FVSDDYSDSPNFEQLSNSEHRSVLPSNGAGEMEKSDLMSTNGGLNKAAGHELTAYV 212
            +  +VS+D  DS     LS+ +H +   SN +G+++ ++ +  NG + K     +    
Sbjct: 499 ETCHYVSEDLLDS---NLLSDLDHCNFNLSNNSGKIDNNNELPLNGSVAKVNAPNVVGCA 555

Query: 211 TPSKEAGSVKTVDMESFLFSGQSVARSVEGRNYRDNILHKKALLLSSEKDHSLWVDDYKC 32
             S +      V+ +SF FS Q  +   +     +N L    +  S++K+  LWV+DYKC
Sbjct: 556 PKSHQIKVSHLVEADSFSFSEQCESNRPDRARRTNNDLDD-GVPSSNQKEQFLWVNDYKC 614

Query: 31  SLCGAELPP 5
           SLCG ELPP
Sbjct: 615 SLCGIELPP 623


>ref|XP_002300272.1| predicted protein [Populus trichocarpa] gi|222847530|gb|EEE85077.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
 Frame = -3

Query: 319 RSVLPSNGAGEMEKSDLMSTNG----GLNKAAGHELTAYVTPSKEAGSVKTVDMESFLFS 152
           R  L SN   ++      ST+      +++ + +++   V     AG V           
Sbjct: 21  RDPLASNNLEDLNVHHCTSTDSVEAEKIHEPSSNKIADKVITKDMAGEVSQWKESGLSLP 80

Query: 151 GQSVARSVEGRNYRDNILHKKALLLSSEKDHSLWVDDYKCSLCGAELPP 5
           GQ    S +  N    I+H +A+  S +KD  +WVDDYKCSLCG E+PP
Sbjct: 81  GQLEGGSPDRMN--QVIMHNEAVFSSEQKDELVWVDDYKCSLCGIEMPP 127


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