BLASTX nr result

ID: Coptis21_contig00022668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022668
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274541.1| PREDICTED: uncharacterized protein LOC100260...    70   1e-10
emb|CAN70572.1| hypothetical protein VITISV_027128 [Vitis vinifera]    70   1e-10
emb|CAB68123.2| hypothetical protein [Arabidopsis thaliana]            64   1e-08
ref|XP_002308914.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_003552309.1| PREDICTED: uncharacterized protein LOC100805...    58   9e-07

>ref|XP_002274541.1| PREDICTED: uncharacterized protein LOC100260688 [Vitis vinifera]
          Length = 731

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 31/131 (23%)
 Frame = +1

Query: 49  LFGWFLPSSTCSLDIVIVPIVASPNKLSNQPDLQVYLRCTNGKMAQLLQDKATFSILGYC 228
           LFGWF+  S+ SLD+V+           N+  LQ  L CTN  M   LQ+ + F+ LG+C
Sbjct: 26  LFGWFVSCSSASLDVVVAHAADEVLLSKNESGLQGILHCTNENMPVFLQETSAFTTLGHC 85

Query: 229 TSESS-------------------------------GLEDGPSQWSCGCHKLDGFLEEHR 315
            ++ S                               G  +   +WSCGC KL   LE+ R
Sbjct: 86  AADFSCNGQLSSIEMDKDDQRKSNIHGHINLQNYQDGFGENYGRWSCGCQKLGELLEQCR 145

Query: 316 RLAVKSGNWIQ 348
           + ++ + NW+Q
Sbjct: 146 QASIGNSNWMQ 156


>emb|CAN70572.1| hypothetical protein VITISV_027128 [Vitis vinifera]
          Length = 749

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 31/131 (23%)
 Frame = +1

Query: 49  LFGWFLPSSTCSLDIVIVPIVASPNKLSNQPDLQVYLRCTNGKMAQLLQDKATFSILGYC 228
           LFGWF+  S+ SLD+V+           N+  LQ  L CTN  M   LQ+ + F+ LG+C
Sbjct: 26  LFGWFVSCSSASLDVVVAHAADEVLLSKNESGLQGILHCTNENMPVFLQETSAFTTLGHC 85

Query: 229 TSESS-------------------------------GLEDGPSQWSCGCHKLDGFLEEHR 315
            ++ S                               G  +   +WSCGC KL   LE+ R
Sbjct: 86  AADFSCNGQLSSIEMDKDDQRKSNIHGHINLQNYQDGFGENYGRWSCGCQKLGELLEQCR 145

Query: 316 RLAVKSGNWIQ 348
           + ++ + NW+Q
Sbjct: 146 QASIGNSNWMQ 156


>emb|CAB68123.2| hypothetical protein [Arabidopsis thaliana]
          Length = 261

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 22/124 (17%)
 Frame = +1

Query: 46  ILFGWFLPSSTCSLDIVIVPIVASPNKLSNQPD-LQVYLRCTNGKMAQLLQDKATFSILG 222
           +LFGWF+  S+  LD+V V  ++  + LSN    LQ  LR TN KM   L+DKA F++LG
Sbjct: 23  LLFGWFVCHSSSCLDVV-VSFISDESSLSNAGSKLQDVLRETNEKMPSTLRDKAAFTLLG 81

Query: 223 YC------------------TSESSGLEDGPSQW---SCGCHKLDGFLEEHRRLAVKSGN 339
                                S  +G    P ++   SCGCHK+DG LE+ R+ +V++  
Sbjct: 82  RYDISRNANGNVSKIIRDKDMSRKAGAYVRPCKYSGLSCGCHKVDGLLEDFRKDSVRN-Y 140

Query: 340 WIQL 351
           WI +
Sbjct: 141 WIHM 144


>ref|XP_002308914.1| predicted protein [Populus trichocarpa] gi|222854890|gb|EEE92437.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 33/135 (24%)
 Frame = +1

Query: 46  ILFGWFLPSSTCSLDIVIVPIVASPNKLSNQPDLQVYLRCTNGKMAQLLQDKATFSILGY 225
           +L GWF   S+ S+D+V+       +   +   LQ  LR  NGKM   LQ++A FS+LG 
Sbjct: 25  LLLGWFASCSSVSVDVVVAFACNEASFSHSNSTLQEILRGVNGKMPVFLQERAAFSLLGQ 84

Query: 226 CT--------SESSGLEDGPSQW-------------------------SCGCHKLDGFLE 306
           C             G+E G   W                         SCGC++LDG  E
Sbjct: 85  CVLYGRGNGKMSRDGMEGG--DWRNSFTDGFDSVMNSRDLSDGKDGGSSCGCNELDGSHE 142

Query: 307 EHRRLAVKSGNWIQL 351
           + R+  V++G WI+L
Sbjct: 143 QCRKECVENGLWIRL 157


>ref|XP_003552309.1| PREDICTED: uncharacterized protein LOC100805383 [Glycine max]
          Length = 715

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 26/128 (20%)
 Frame = +1

Query: 46  ILFGWFLPSSTCSLDIVIVPIVASPNKLSNQPDLQVYLRCTNGKMAQLLQDKATFSILGY 225
           IL GWF+  S  SLDI++    +     S  P ++  +  T G M  +L+DK+ FS+LG 
Sbjct: 23  ILLGWFVTCSPSSLDIIVAFTCSEVLLSSYSPGIEGIIHGTCGSMPSVLEDKSKFSVLGL 82

Query: 226 CTSE---SSGLEDGP-----------------------SQWSCGCHKLDGFLEEHRRLAV 327
           C ++   S+GL +G                        +  SC C +LDG L +  +  +
Sbjct: 83  CVTDPTTSNGLMNGAEDDKKKFSEFGNALQEGDTDRKNNSRSCCCFQLDGSLRKSSQYVL 142

Query: 328 KSGNWIQL 351
              NW+ L
Sbjct: 143 GRSNWVLL 150


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