BLASTX nr result
ID: Coptis21_contig00022630
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00022630 (249 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 120 9e-26 ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial pro... 120 9e-26 ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro... 114 1e-23 ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu... 106 2e-21 ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2... 106 2e-21 >ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial protein ymf11-like [Cucumis sativus] Length = 697 Score = 120 bits (302), Expect = 9e-26 Identities = 56/83 (67%), Positives = 70/83 (84%) Frame = +1 Query: 1 FLKKFDLWVLAYQRSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVWGMKTDLILR 180 FL KFDLWVLAYQRSCA+ TG+FPPRNAIH +VLRDLLSL+ AV+NG+F W K + ++R Sbjct: 90 FLSKFDLWVLAYQRSCADLTGNFPPRNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIR 149 Query: 181 SPNDKLGTKVLSKRKLQALLESE 249 PNDK T ++SKRKL+A+LES+ Sbjct: 150 CPNDKSRTHLISKRKLRAMLESD 172 >ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Cucumis sativus] Length = 697 Score = 120 bits (302), Expect = 9e-26 Identities = 56/83 (67%), Positives = 70/83 (84%) Frame = +1 Query: 1 FLKKFDLWVLAYQRSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVWGMKTDLILR 180 FL KFDLWVLAYQRSCA+ TG+FPPRNAIH +VLRDLLSL+ AV+NG+F W K + ++R Sbjct: 90 FLSKFDLWVLAYQRSCADLTGNFPPRNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIR 149 Query: 181 SPNDKLGTKVLSKRKLQALLESE 249 PNDK T ++SKRKL+A+LES+ Sbjct: 150 CPNDKSRTHLISKRKLRAMLESD 172 >ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis vinifera] Length = 689 Score = 114 bits (284), Expect = 1e-23 Identities = 56/82 (68%), Positives = 64/82 (78%) Frame = +1 Query: 1 FLKKFDLWVLAYQRSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVWGMKTDLILR 180 FL KFDLWVLAYQRSCA TGSFPPRNAIH VLRDLLSLQ AV+ G+F W K +R Sbjct: 74 FLSKFDLWVLAYQRSCAHFTGSFPPRNAIHSQVLRDLLSLQNAVVRGRFSWNHKIHSYIR 133 Query: 181 SPNDKLGTKVLSKRKLQALLES 246 SPN+K T+ SKRK+Q++LES Sbjct: 134 SPNEKPLTEFTSKRKIQSILES 155 >ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis] gi|223541113|gb|EEF42669.1| RNA binding protein, putative [Ricinus communis] Length = 681 Score = 106 bits (265), Expect = 2e-21 Identities = 51/82 (62%), Positives = 63/82 (76%) Frame = +1 Query: 1 FLKKFDLWVLAYQRSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVWGMKTDLILR 180 FL K DLWVLAYQRSCA+ TG+FPPRNA+H L LLSLQ AV++ +F W KT I+R Sbjct: 66 FLSKLDLWVLAYQRSCAQVTGTFPPRNALHSQTLHSLLSLQNAVVHNRFKWNDKTRQIIR 125 Query: 181 SPNDKLGTKVLSKRKLQALLES 246 SPNDK TK++SK KL+A++ S Sbjct: 126 SPNDKPFTKLVSKTKLKAMVNS 147 >ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1| predicted protein [Populus trichocarpa] Length = 623 Score = 106 bits (264), Expect = 2e-21 Identities = 51/83 (61%), Positives = 61/83 (73%) Frame = +1 Query: 1 FLKKFDLWVLAYQRSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVWGMKTDLILR 180 FL K DLW LAYQRSCA TG FPPRNA+ + L L SLQTAV++ +F W K ILR Sbjct: 36 FLSKLDLWALAYQRSCAHVTGKFPPRNALPSHALHSLFSLQTAVVHNRFKWNDKAHQILR 95 Query: 181 SPNDKLGTKVLSKRKLQALLESE 249 SPNDK TK++SKRKL A++ES+ Sbjct: 96 SPNDKPSTKLVSKRKLSAMMESD 118