BLASTX nr result

ID: Coptis21_contig00022630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022630
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   120   9e-26
ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial pro...   120   9e-26
ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   114   1e-23
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   106   2e-21
ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/83 (67%), Positives = 70/83 (84%)
 Frame = +1

Query: 1   FLKKFDLWVLAYQRSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVWGMKTDLILR 180
           FL KFDLWVLAYQRSCA+ TG+FPPRNAIH +VLRDLLSL+ AV+NG+F W  K + ++R
Sbjct: 90  FLSKFDLWVLAYQRSCADLTGNFPPRNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIR 149

Query: 181 SPNDKLGTKVLSKRKLQALLESE 249
            PNDK  T ++SKRKL+A+LES+
Sbjct: 150 CPNDKSRTHLISKRKLRAMLESD 172


>ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 697

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/83 (67%), Positives = 70/83 (84%)
 Frame = +1

Query: 1   FLKKFDLWVLAYQRSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVWGMKTDLILR 180
           FL KFDLWVLAYQRSCA+ TG+FPPRNAIH +VLRDLLSL+ AV+NG+F W  K + ++R
Sbjct: 90  FLSKFDLWVLAYQRSCADLTGNFPPRNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIR 149

Query: 181 SPNDKLGTKVLSKRKLQALLESE 249
            PNDK  T ++SKRKL+A+LES+
Sbjct: 150 CPNDKSRTHLISKRKLRAMLESD 172


>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/82 (68%), Positives = 64/82 (78%)
 Frame = +1

Query: 1   FLKKFDLWVLAYQRSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVWGMKTDLILR 180
           FL KFDLWVLAYQRSCA  TGSFPPRNAIH  VLRDLLSLQ AV+ G+F W  K    +R
Sbjct: 74  FLSKFDLWVLAYQRSCAHFTGSFPPRNAIHSQVLRDLLSLQNAVVRGRFSWNHKIHSYIR 133

Query: 181 SPNDKLGTKVLSKRKLQALLES 246
           SPN+K  T+  SKRK+Q++LES
Sbjct: 134 SPNEKPLTEFTSKRKIQSILES 155


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/82 (62%), Positives = 63/82 (76%)
 Frame = +1

Query: 1   FLKKFDLWVLAYQRSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVWGMKTDLILR 180
           FL K DLWVLAYQRSCA+ TG+FPPRNA+H   L  LLSLQ AV++ +F W  KT  I+R
Sbjct: 66  FLSKLDLWVLAYQRSCAQVTGTFPPRNALHSQTLHSLLSLQNAVVHNRFKWNDKTRQIIR 125

Query: 181 SPNDKLGTKVLSKRKLQALLES 246
           SPNDK  TK++SK KL+A++ S
Sbjct: 126 SPNDKPFTKLVSKTKLKAMVNS 147


>ref|XP_002305338.1| predicted protein [Populus trichocarpa] gi|222848302|gb|EEE85849.1|
           predicted protein [Populus trichocarpa]
          Length = 623

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/83 (61%), Positives = 61/83 (73%)
 Frame = +1

Query: 1   FLKKFDLWVLAYQRSCAEETGSFPPRNAIHFNVLRDLLSLQTAVLNGQFVWGMKTDLILR 180
           FL K DLW LAYQRSCA  TG FPPRNA+  + L  L SLQTAV++ +F W  K   ILR
Sbjct: 36  FLSKLDLWALAYQRSCAHVTGKFPPRNALPSHALHSLFSLQTAVVHNRFKWNDKAHQILR 95

Query: 181 SPNDKLGTKVLSKRKLQALLESE 249
           SPNDK  TK++SKRKL A++ES+
Sbjct: 96  SPNDKPSTKLVSKRKLSAMMESD 118


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