BLASTX nr result

ID: Coptis21_contig00022629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022629
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    84   2e-14
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]    58   7e-07
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    58   7e-07

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
 Frame = +1

Query: 61   APWLMLXXXXXXXXXXXXXFYSVSSKRTFQIQLPQLKGRRCWGSPYGWLLTFGLDLNIQL 240
            +PWLML             FYS  S + ++I+LP++ G+ CWGSPYGWL+T G DL++ L
Sbjct: 969  SPWLMLAEKENSEIRG---FYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCL 1025

Query: 241  FNPLTGTQISLPS------QSTFEACYMKPERLRWIYIEKFVLASNPSVWSTQSNQRCQV 402
             NPLT  QI LPS       +T      +  R + I+I K VL+S P      S+  C V
Sbjct: 1026 LNPLTRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP------SSPDCAV 1079

Query: 403  MAIYGE 420
            M IY +
Sbjct: 1080 MIIYSD 1085


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
 Frame = +1

Query: 64  PWLMLXXXXXXXXXXXXXFYSVSSKRTFQIQLPQLKGRRCWGSPYGWLLTFGLDLNIQLF 243
           PWL+L             FY+ S  +T+ ++LP+   +RC GS +GWL+      +I L 
Sbjct: 51  PWLLLPHHKDNPNHRG--FYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLL 108

Query: 244 NPLTGTQISLPSQSTF-----EACYMKPE------------RLRWIYIEKFVLASNPSVW 372
           NPLT ++I LPS STF     E  Y                R+R  YI K +++ +PSV 
Sbjct: 109 NPLTKSRIELPSLSTFPNFPTEVIYQNSRNLNEYFIRNNKLRIRETYIRKAIVSEDPSVG 168

Query: 373 STQSNQRCQVMAIY 414
           S        VMAIY
Sbjct: 169 S------FMVMAIY 176


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
 Frame = +1

Query: 64  PWLMLXXXXXXXXXXXXXFYSVSSKRTFQIQLPQLKGRRCWGSPYGWLLTFGLDLNIQLF 243
           PWL+L             FY+++  +T+ ++LP+   +RC GS +GWL+      +I L 
Sbjct: 51  PWLLLPYHKNNPNHRG--FYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLL 108

Query: 244 NPLTGTQISLPSQSTF-----EACYMKPE------------RLRWIYIEKFVLASNPSVW 372
           NPLT  +I LPS STF     E  Y                R+R  YI K +++ +PS  
Sbjct: 109 NPLTKARIELPSLSTFPYFPTEVVYENSRNINEYFNTKAKLRIRETYIRKAIVSEDPSTG 168

Query: 373 STQSNQRCQVMAIY 414
           +        VMAIY
Sbjct: 169 N------FAVMAIY 176


>emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]
          Length = 320

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
 Frame = +1

Query: 1   WRSVAIAKKQQLSNGSLSRFAPWLMLXXXXXXXXXXXXXFYSVSSKRTFQIQLPQLKGRR 180
           W  VA+  +QQ+    L   +P L+L             F+    K+ ++IQ+P ++ + 
Sbjct: 37  WGLVALEARQQVFK-PLRPLSPMLLLPPNKDDEAHKLYDFFK---KKAYKIQIPAMRDKW 92

Query: 181 CWGSPYGWLLTFG--LDLNIQLFNPLTGTQISLPSQSTFEACYMK-PERLRWIYIEKFVL 351
           C  S  GWL+T        I   NP++G QI LP   TFE       E     ++ K VL
Sbjct: 93  CCNSWNGWLITINHTFPYEICCLNPISGVQIDLPPAITFEDSPPDLDETPIEFFLNKVVL 152

Query: 352 ASNPSVWSTQSNQRCQVMAIY 414
           +S PS     SN  C +MAI+
Sbjct: 153 SSTPS----PSNANCVIMAIH 169


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
 Frame = +1

Query: 1   WRSVAIAKKQQLSNGSLSRFAPWLMLXXXXXXXXXXXXXFYSVSSKRTFQIQLPQLKGRR 180
           W  VA+  +QQ+    L   +P L+L             F+    K+ ++IQ+P ++ + 
Sbjct: 37  WGLVALEARQQVFK-PLRPLSPMLLLPPNKDDGAHKLYDFFK---KKAYKIQIPAMRDKW 92

Query: 181 CWGSPYGWLLTFG--LDLNIQLFNPLTGTQISLPSQSTFEACYMK-PERLRWIYIEKFVL 351
           C  S  GWL+T        I   NP++G QI LP   TFE       E     ++ K VL
Sbjct: 93  CCNSWNGWLITINHTFPYEICCLNPISGVQIDLPPAITFEDSPPDLDETPIEFFLNKVVL 152

Query: 352 ASNPSVWSTQSNQRCQVMAIY 414
           +S PS     SN  C +MAI+
Sbjct: 153 SSTPS----PSNANCVIMAIH 169


Top