BLASTX nr result

ID: Coptis21_contig00022623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022623
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633973.1| PREDICTED: methionine adenosyltransferase 2 ...   189   2e-46
ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 ...   189   2e-46
emb|CAN72378.1| hypothetical protein VITISV_014357 [Vitis vinifera]   189   3e-46
gb|ABK94912.1| unknown [Populus trichocarpa]                          188   7e-46
ref|XP_003528874.1| PREDICTED: methionine adenosyltransferase 2 ...   182   5e-44

>ref|XP_003633973.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 2
           [Vitis vinifera]
          Length = 301

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/128 (73%), Positives = 110/128 (85%)
 Frame = -2

Query: 591 SLPIQWIDGVLSKGVKVDFFYDEFRCPVYVKDVTAIILALIKMWILDGKQMQLLFNVCGP 412
           SLPIQWIDGVLS+G K+DFFYDEFRCPVYVKDV AIILAL   WI +GKQM+L+ N  GP
Sbjct: 169 SLPIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMKLILNAGGP 228

Query: 411 DRLSRAQMAETVASVRGYNTSLINPVSASSVNRGVQSPSDISMDISRLVQQLGVAPISYK 232
           DR+SRAQ+AETVA VRGY+TSLI PVSASSV+RGV+SP DISMDI+ L+Q L ++P S +
Sbjct: 229 DRVSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTLHISPTSLR 288

Query: 231 EGVKLTLE 208
            GV+LTLE
Sbjct: 289 VGVQLTLE 296


>ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
           [Vitis vinifera] gi|297745208|emb|CBI40288.3| unnamed
           protein product [Vitis vinifera]
          Length = 318

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/128 (73%), Positives = 110/128 (85%)
 Frame = -2

Query: 591 SLPIQWIDGVLSKGVKVDFFYDEFRCPVYVKDVTAIILALIKMWILDGKQMQLLFNVCGP 412
           SLPIQWIDGVLS+G K+DFFYDEFRCPVYVKDV AIILAL   WI +GKQM+L+ N  GP
Sbjct: 186 SLPIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMKLILNAGGP 245

Query: 411 DRLSRAQMAETVASVRGYNTSLINPVSASSVNRGVQSPSDISMDISRLVQQLGVAPISYK 232
           DR+SRAQ+AETVA VRGY+TSLI PVSASSV+RGV+SP DISMDI+ L+Q L ++P S +
Sbjct: 246 DRVSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTLHISPTSLR 305

Query: 231 EGVKLTLE 208
            GV+LTLE
Sbjct: 306 VGVQLTLE 313


>emb|CAN72378.1| hypothetical protein VITISV_014357 [Vitis vinifera]
          Length = 368

 Score =  189 bits (480), Expect = 3e-46
 Identities = 93/128 (72%), Positives = 110/128 (85%)
 Frame = -2

Query: 591 SLPIQWIDGVLSKGVKVDFFYDEFRCPVYVKDVTAIILALIKMWILDGKQMQLLFNVCGP 412
           SLPIQWIDGVLS+G K+DFFYDEFRCPVYVKDV AIILAL   WI +GKQM+L+ N  GP
Sbjct: 236 SLPIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMKLILNAGGP 295

Query: 411 DRLSRAQMAETVASVRGYNTSLINPVSASSVNRGVQSPSDISMDISRLVQQLGVAPISYK 232
           DR+SRAQ+AETVA VRGY+TSLI PVSASSV+RGV+SP DISMDI+ L+Q L ++P S +
Sbjct: 296 DRVSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTLHISPTSLR 355

Query: 231 EGVKLTLE 208
            G++LTLE
Sbjct: 356 VGIQLTLE 363


>gb|ABK94912.1| unknown [Populus trichocarpa]
          Length = 300

 Score =  188 bits (477), Expect = 7e-46
 Identities = 92/128 (71%), Positives = 110/128 (85%)
 Frame = -2

Query: 591 SLPIQWIDGVLSKGVKVDFFYDEFRCPVYVKDVTAIILALIKMWILDGKQMQLLFNVCGP 412
           SLPIQWIDGVLSK  +V+FF+DEFRCPVYVKDV  IIL+LI  WI++GKQM+LL NV GP
Sbjct: 171 SLPIQWIDGVLSKKEQVEFFHDEFRCPVYVKDVVTIILSLINKWIIEGKQMKLLLNVGGP 230

Query: 411 DRLSRAQMAETVASVRGYNTSLINPVSASSVNRGVQSPSDISMDISRLVQQLGVAPISYK 232
           DR+SR QMAETVA VRGYNTSLI  VSASSV RGV SP+DISMDIS+L+Q + ++P S++
Sbjct: 231 DRVSRVQMAETVAHVRGYNTSLIKQVSASSVYRGVSSPADISMDISKLIQTVSISPTSFR 290

Query: 231 EGVKLTLE 208
           +GV LTL+
Sbjct: 291 DGVILTLD 298


>ref|XP_003528874.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
           [Glycine max]
          Length = 324

 Score =  182 bits (461), Expect = 5e-44
 Identities = 89/130 (68%), Positives = 106/130 (81%)
 Frame = -2

Query: 591 SLPIQWIDGVLSKGVKVDFFYDEFRCPVYVKDVTAIILALIKMWILDGKQMQLLFNVCGP 412
           SLPIQWIDG L+KG KV+FF+DEFRCP+YVKD+  IIL L   WI +GKQMQLL NV G 
Sbjct: 192 SLPIQWIDGALAKGEKVEFFHDEFRCPIYVKDLVTIILTLTSQWISEGKQMQLLLNVGGA 251

Query: 411 DRLSRAQMAETVASVRGYNTSLINPVSASSVNRGVQSPSDISMDISRLVQQLGVAPISYK 232
           DR+SR QMAE VA  RGY+ SLI  VSASSV+RGV+SP+DISMDI+RLVQ L + P+S+K
Sbjct: 252 DRVSRLQMAEAVAEFRGYDASLIKSVSASSVDRGVKSPADISMDITRLVQTLRIHPVSFK 311

Query: 231 EGVKLTLEIE 202
           +GV+LTL  E
Sbjct: 312 DGVRLTLTTE 321


Top