BLASTX nr result

ID: Coptis21_contig00022613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022613
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281360.2| PREDICTED: microtubule-associated protein TO...   336   5e-90
ref|XP_004166753.1| PREDICTED: microtubule-associated protein TO...   334   1e-89
emb|CAD45375.1| potyviral helper component protease-interacting ...   331   2e-88
ref|NP_194436.2| Microtubule-associated protein TORTIFOLIA1 [Ara...   325   1e-86
ref|XP_003553106.1| PREDICTED: microtubule-associated protein TO...   323   3e-86

>ref|XP_002281360.2| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Vitis
           vinifera]
          Length = 904

 Score =  336 bits (861), Expect = 5e-90
 Identities = 176/273 (64%), Positives = 208/273 (76%), Gaps = 10/273 (3%)
 Frame = -3

Query: 790 HFAMIELKQRILTSLSKLSDRDTHQIAIQDLETTIQTLSSEP-IPMLLNSLYDASNDPKP 614
           H AM+ELKQRILTSLSKLSDRDTHQIA+ DL   IQ LS++  + +LLN LY+AS+DPKP
Sbjct: 35  HLAMVELKQRILTSLSKLSDRDTHQIAVDDLHNLIQNLSTDSGVSILLNCLYEASSDPKP 94

Query: 613 AVKKESLRLLSFLSTCHPDLTLPHLSKIVTHIVRKLKDSDSGVRDACRDAIGVLSMQYL- 437
            VKKESLRLL+ L T HPD T  HL+KI++HIVR+LKDSD+GVRDACRDAIG LS  YL 
Sbjct: 95  LVKKESLRLLALLCTSHPDSTSSHLTKIISHIVRRLKDSDTGVRDACRDAIGTLSSLYLK 154

Query: 436 -------NVG-GSLVPLFVKPLFEAMGEQNKVVQAGSAICMARMVECAINPQVSAFQKLC 281
                  N G GS+V LFVKPLFEAM EQNK VQ+G+A+C+A+MVECA +P V AFQKLC
Sbjct: 155 GDGGGGDNGGLGSVVSLFVKPLFEAMIEQNKGVQSGAAMCLAKMVECASDPPVGAFQKLC 214

Query: 280 PRICKYLSSQNFLARSALLPVVACLSQIGAIAPQSLPTFLQVLHECLQSSDWGTRKXXXX 101
            R+CK L++ NFLA++ALLPVV  LSQ+GAIAPQSL   LQ +H+CL S DW TRK    
Sbjct: 215 SRVCKLLNNPNFLAKAALLPVVGSLSQVGAIAPQSLEAVLQSIHDCLGSPDWATRKAAAD 274

Query: 100 XXXXXXAHSRHLIADDTASTITALEACRFDKVK 2
                  HS +LI D   ST+ ALEACRFDK+K
Sbjct: 275 TLSTLAMHSNNLIMDGATSTLAALEACRFDKIK 307


>ref|XP_004166753.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Cucumis
           sativus]
          Length = 926

 Score =  334 bits (857), Expect = 1e-89
 Identities = 173/273 (63%), Positives = 206/273 (75%), Gaps = 10/273 (3%)
 Frame = -3

Query: 790 HFAMIELKQRILTSLSKLSDRDTHQIAIQDLETTIQTLSSEPIPMLLNSLYDASNDPKPA 611
           H AM+ELKQRILT+LSKL+DRDTHQIAI DLE  IQ++S E IPMLLN LYD+S DPKPA
Sbjct: 32  HLAMVELKQRILTALSKLADRDTHQIAIDDLEKIIQSISPEAIPMLLNCLYDSSADPKPA 91

Query: 610 VKKESLRLLSFLSTCHPDLTLPHLSKIVTHIVRKLKDSDSGVRDACRDAIGVLSMQYL-- 437
           VKKESLRLL+ +   H D T  HL+KI+ HI+R++KDSDSGV+D+CRDAIG LS QYL  
Sbjct: 92  VKKESLRLLTVVCASHSDSTSTHLTKIIAHIIRRVKDSDSGVKDSCRDAIGALSAQYLKG 151

Query: 436 -------NVG-GSLVPLFVKPLFEAMGEQNKVVQAGSAICMARMVECAINPQVSAFQKLC 281
                  N G GS+V LFVKPLFEAMGEQNK VQ+G+A+CMA+MVECA +P + AFQKLC
Sbjct: 152 DSSGGGDNGGLGSVVALFVKPLFEAMGEQNKGVQSGAALCMAKMVECAASPPIMAFQKLC 211

Query: 280 PRICKYLSSQNFLARSALLPVVACLSQIGAIAPQSLPTFLQVLHECLQSSDWGTRKXXXX 101
           PRICK L++ NFLA+++LLPVV+ LSQ+GAI  QSL   L  +HE L S+DW TRK    
Sbjct: 212 PRICKLLNNPNFLAKASLLPVVSNLSQVGAIGQQSLENLLPSIHELLGSTDWATRKAAAD 271

Query: 100 XXXXXXAHSRHLIADDTASTITALEACRFDKVK 2
                  HS + I D  AST   LEACRFDK+K
Sbjct: 272 ALSALALHSSNFITDGGASTFAVLEACRFDKIK 304


>emb|CAD45375.1| potyviral helper component protease-interacting protein 2 [Solanum
           tuberosum subsp. andigenum]
          Length = 862

 Score =  331 bits (848), Expect = 2e-88
 Identities = 168/269 (62%), Positives = 208/269 (77%), Gaps = 6/269 (2%)
 Frame = -3

Query: 790 HFAMIELKQRILTSLSKLSDRDTHQIAIQDLETTIQTLSSEPIPMLLNSLYDASNDPKPA 611
           HFAMIELKQRILTS+SKLSDRDTHQIA++DLE  IQTLS++ + MLLN LYDASNDPKPA
Sbjct: 36  HFAMIELKQRILTSISKLSDRDTHQIAVEDLEKIIQTLSNDGVSMLLNCLYDASNDPKPA 95

Query: 610 VKKESLRLLSFLSTCHPDLTLPHLSKIVTHIVRKLKDSDSGVRDACRDAIGVLSMQYLNV 431
           VKKE+LRLL  +   H D    HL+KI+ +IV++LKDSDSGVRDACRDAIG LS  YL  
Sbjct: 96  VKKETLRLLPTVCASHGDSAATHLTKIIGNIVKRLKDSDSGVRDACRDAIGSLSSLYLKG 155

Query: 430 G------GSLVPLFVKPLFEAMGEQNKVVQAGSAICMARMVECAINPQVSAFQKLCPRIC 269
                  GS+V LFVKPLFEAM E +K VQ+G+A+CMA++VECA +P V +FQKLCPRIC
Sbjct: 156 EAESGGIGSVVALFVKPLFEAMNENSKTVQSGAALCMAKVVECASDPPVLSFQKLCPRIC 215

Query: 268 KYLSSQNFLARSALLPVVACLSQIGAIAPQSLPTFLQVLHECLQSSDWGTRKXXXXXXXX 89
           KYL++ +F+A+++LLPVV+ LSQ+GAIAPQ+L   LQ +HECL ++DW TRK        
Sbjct: 216 KYLNNPHFVAKASLLPVVSSLSQVGAIAPQNLEPLLQTIHECLSNTDWATRKAAADTLSA 275

Query: 88  XXAHSRHLIADDTASTITALEACRFDKVK 2
              +S +L+A    ST+T LEA RFDK+K
Sbjct: 276 LALNSSNLVAGGATSTLTVLEASRFDKIK 304


>ref|NP_194436.2| Microtubule-associated protein TORTIFOLIA1 [Arabidopsis thaliana]
           gi|83288274|sp|Q9T041.2|MAPT_ARATH RecName:
           Full=Microtubule-associated protein TORTIFOLIA1;
           AltName: Full=Microtubule-associated protein SPIRAL2;
           AltName: Full=Protein CONVOLUTA
           gi|51870567|emb|CAC80696.2| TORTIFOLIA1
           microtubule-associated protein [Arabidopsis thaliana]
           gi|53791209|dbj|BAD54701.1| microtubule associated
           protein SPIRAL2 [Arabidopsis thaliana]
           gi|332659895|gb|AEE85295.1| Microtubule-associated
           protein TORTIFOLIA1 [Arabidopsis thaliana]
          Length = 864

 Score =  325 bits (832), Expect = 1e-86
 Identities = 167/270 (61%), Positives = 209/270 (77%), Gaps = 9/270 (3%)
 Frame = -3

Query: 784 AMIELKQRILTSLSKLSDRDTHQIAIQDLETTIQTLSSEPIPMLLNSLYDASNDPKPAVK 605
           AM+ELKQ+ILTS+SKL+DRDT+QIA++DLE TIQ+L+ E +PM LN LYD+ +DPKPAVK
Sbjct: 38  AMVELKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVK 97

Query: 604 KESLRLLSFLSTCHPDLTLPHLSKIVTHIVRKLKDSDSGVRDACRDAIGVLSMQYL---- 437
           KE L LLS++ + H D T  HL+KI+  IV++LKDSDSGVRDACRD IG LS  YL    
Sbjct: 98  KECLHLLSYVCSLHCDSTAAHLTKIIAQIVKRLKDSDSGVRDACRDTIGALSGIYLKGKE 157

Query: 436 ---NVGGS--LVPLFVKPLFEAMGEQNKVVQAGSAICMARMVECAINPQVSAFQKLCPRI 272
              N G +   V LFVKPLFEAMGEQNKVVQ+G+++CMARMVE A +P V++FQKLCPRI
Sbjct: 158 EGTNTGSASLAVGLFVKPLFEAMGEQNKVVQSGASMCMARMVESAASPPVTSFQKLCPRI 217

Query: 271 CKYLSSQNFLARSALLPVVACLSQIGAIAPQSLPTFLQVLHECLQSSDWGTRKXXXXXXX 92
           CK LS+ +FLA+++LLPVV+ LSQ+GAIAPQSL + L+ +H+CL S+DW TRK       
Sbjct: 218 CKLLSNSSFLAKASLLPVVSSLSQVGAIAPQSLESLLESIHDCLGSTDWVTRKAAAETLT 277

Query: 91  XXXAHSRHLIADDTASTITALEACRFDKVK 2
              +HS  LI + T STIT LE CRFDK+K
Sbjct: 278 ALASHSSGLIKEKTDSTITVLETCRFDKIK 307


>ref|XP_003553106.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Glycine
           max]
          Length = 923

 Score =  323 bits (828), Expect = 3e-86
 Identities = 166/276 (60%), Positives = 202/276 (73%), Gaps = 13/276 (4%)
 Frame = -3

Query: 790 HFAMIELKQRILTSLSKLSDRDTHQIAIQDLETTIQTLSSEPIPMLLNSLYDASNDPKPA 611
           H AM+ELKQ+ILTSLSKLSDRDTHQIA++DLE TI  LS + IPM+LN LYDA+ DPKPA
Sbjct: 26  HLAMVELKQKILTSLSKLSDRDTHQIAVEDLEKTISGLSPDAIPMILNCLYDAATDPKPA 85

Query: 610 VKKESLRLLSFLSTCHPDLTLPHLSKIVTHIVRKLKDSDSGVRDACRDAIGVLSMQYLNV 431
           VK+++LRLL+ +   H D    HL+KI+ H+VR+LKD+DS VRDACRD +G L+ QYL  
Sbjct: 86  VKRDALRLLAAVCGAHSDAAAAHLTKIIAHVVRRLKDADSAVRDACRDTVGALAAQYLKG 145

Query: 430 G--------GSLVPLFVKPLFEAMGEQNKVVQAGSAICMARMVECAINP-----QVSAFQ 290
                    G++V LFVKPLFEAMGEQNK VQAG+A+CMA+MVECA         V+AFQ
Sbjct: 146 DGGGGGGGVGTVVGLFVKPLFEAMGEQNKGVQAGAAVCMAKMVECAGGSGGEAVPVAAFQ 205

Query: 289 KLCPRICKYLSSQNFLARSALLPVVACLSQIGAIAPQSLPTFLQVLHECLQSSDWGTRKX 110
           KLCPRI K L+S NF+A++A+LPVVA LSQ+GAIAPQSL   L  +HECL S+DW TRK 
Sbjct: 206 KLCPRIYKLLNSPNFMAKAAILPVVASLSQVGAIAPQSLEHLLPSIHECLSSTDWATRKA 265

Query: 109 XXXXXXXXXAHSRHLIADDTASTITALEACRFDKVK 2
                     HS  L+ D  A T+  LEACRFDK+K
Sbjct: 266 AAEALSSLALHSSSLVTDRAAPTLAVLEACRFDKIK 301


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