BLASTX nr result

ID: Coptis21_contig00022583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022583
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vi...   204   1e-50
dbj|BAB70511.1| Myb [Nicotiana tabacum]                               178   7e-43
ref|XP_003545596.1| PREDICTED: myb-related protein 3R-1-like [Gl...   172   7e-41
ref|XP_002324814.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
emb|CBI20887.3| unnamed protein product [Vitis vinifera]              167   1e-39

>ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vitis vinifera]
          Length = 1051

 Score =  204 bits (519), Expect = 1e-50
 Identities = 114/204 (55%), Positives = 137/204 (67%), Gaps = 4/204 (1%)
 Frame = -2

Query: 605  DDFAYPCDSMIPYCDNNVEKVCLPMEPDQANDALNSELVENFSSVSLEADGIACSVNEST 426
            DDF Y  DS    C N  E   L  +P  A D++N   V++F S   +      S     
Sbjct: 512  DDFIYTNDSTNSICHNGTENKDLQEQPGPAKDSVNLVPVDSFGSGPSDIMHTCPSREGKQ 571

Query: 425  PVKTHQPDSEALFYEPPRFPSLELPFFSCDLIPSGSDLQQAYSPLGIRQL-MSSMNC-SN 252
               T Q D  ALFYEPPRFPSL++PFFSCDLI SGSD+QQ YSPLGIRQL MSSMNC + 
Sbjct: 572  LAHTEQQDEGALFYEPPRFPSLDIPFFSCDLIQSGSDMQQEYSPLGIRQLMMSSMNCLTP 631

Query: 251  ASIWDSPSRDDSPNLFLKSAAKSFICTPSILKKRQRELL--SPVQEQKIDKKLERDISQG 78
              +WDSPSRDDSP+  LKSAAK+F  TPSILKKR R+LL  SP+ E++ DKKLE DI+QG
Sbjct: 632  FRLWDSPSRDDSPDAVLKSAAKTFTGTPSILKKRHRDLLSPSPLSERRSDKKLESDINQG 691

Query: 77   FYCTSTGIRSDFSSLDAIFDEIGT 6
            F+CTS+ +  +FS LD +FD  GT
Sbjct: 692  FFCTSS-LTKEFSRLDVMFDNSGT 714


>dbj|BAB70511.1| Myb [Nicotiana tabacum]
          Length = 1042

 Score =  178 bits (452), Expect = 7e-43
 Identities = 98/199 (49%), Positives = 129/199 (64%), Gaps = 2/199 (1%)
 Frame = -2

Query: 605  DDFAYPCDSMIPYCDNNVEKVCLPMEPDQANDALNSELVENFSSVSLEADGIACSVNEST 426
            D F YP +S  P CDN ++   L  + DQ  D+L    V +F +           VNE++
Sbjct: 508  DGFLYPFESGTP-CDNIMDDPLLEEQLDQTKDSLQLVSVNDFRTTPSNTIQTCPLVNENS 566

Query: 425  PVKTHQPDSEALFYEPPRFPSLELPFFSCDLIPSGSDLQQAYSPLGIRQL-MSSMNC-SN 252
             +   Q D  AL+YEPPRFPSL++PFFSCDLI SG+D QQ YSPLGIRQL M+S+NC + 
Sbjct: 567  SIPVEQKDGGALYYEPPRFPSLDIPFFSCDLIQSGTDAQQEYSPLGIRQLMMTSVNCLTP 626

Query: 251  ASIWDSPSRDDSPNLFLKSAAKSFICTPSILKKRQRELLSPVQEQKIDKKLERDISQGFY 72
              +WDSPSRD S +  L+SAAK+F  TPSILKKR R+L+SP+ E++ +KKL  D  Q  +
Sbjct: 627  FRLWDSPSRDGSTDAVLRSAAKTFTSTPSILKKRHRDLVSPLSEKRCEKKLGSDFRQESF 686

Query: 71   CTSTGIRSDFSSLDAIFDE 15
               + +  DFS LD +FDE
Sbjct: 687  ---SDLSKDFSRLDVMFDE 702


>ref|XP_003545596.1| PREDICTED: myb-related protein 3R-1-like [Glycine max]
          Length = 1004

 Score =  172 bits (435), Expect = 7e-41
 Identities = 93/159 (58%), Positives = 116/159 (72%), Gaps = 2/159 (1%)
 Frame = -2

Query: 485 NFSSVSLEADGIACSVNESTPVKTHQPDSEALFYEPPRFPSLELPFFSCDLIPSGSDLQQ 306
           N  S S   DGI  +V E T V T + DS +L YEPPRFPSL++PFFSCDL+ SGSD+QQ
Sbjct: 511 NDISCSPCVDGIGSAVMEKTNVHTEKEDSGSLCYEPPRFPSLDIPFFSCDLVQSGSDMQQ 570

Query: 305 AYSPLGIRQ-LMSSMNC-SNASIWDSPSRDDSPNLFLKSAAKSFICTPSILKKRQRELLS 132
            +SPLGIRQ +MSSMNC +   +WDSPSRDD+P+  LKSAAK+F  TPSILKKR R+LLS
Sbjct: 571 EFSPLGIRQFMMSSMNCLTPFRLWDSPSRDDNPDALLKSAAKTFTGTPSILKKRSRDLLS 630

Query: 131 PVQEQKIDKKLERDISQGFYCTSTGIRSDFSSLDAIFDE 15
           P+ ++++DKKLE DI      TS+    +FSSLD  F +
Sbjct: 631 PLSDKRMDKKLETDI------TSSMFTRNFSSLDVTFGD 663


>ref|XP_002324814.1| predicted protein [Populus trichocarpa] gi|222866248|gb|EEF03379.1|
            predicted protein [Populus trichocarpa]
          Length = 1027

 Score =  170 bits (431), Expect = 2e-40
 Identities = 101/203 (49%), Positives = 130/203 (64%), Gaps = 3/203 (1%)
 Frame = -2

Query: 605  DDFAYPCDSMIPYCDNNVEKVCLPMEPDQANDALNSELVENFSSVSLEADGIA-CSVNES 429
            D F Y  D++   CDN  +   L  +P    +      V  F SVS   D I+ C+ +E 
Sbjct: 512  DSFIYTIDAINSSCDNGTDNTELQEKP-YLKEPSKLVPVNTFPSVS---DTISSCAADEK 567

Query: 428  TPVKTHQPDSEALFYEPPRFPSLELPFFSCDLIPSGSDLQQAYSPLGIRQL-MSSMNC-S 255
              V   Q ++  L YEPPRFPSL++PF SCDL+ SGSD+QQ YSPLGIRQL MSSMNC +
Sbjct: 568  PNVHAEQ-EAGGLCYEPPRFPSLDMPFLSCDLVQSGSDMQQEYSPLGIRQLMMSSMNCIT 626

Query: 254  NASIWDSPSRDDSPNLFLKSAAKSFICTPSILKKRQRELLSPVQEQKIDKKLERDISQGF 75
               +WDSPSRD SP+  LKSAAK+F  TPSILKKR R+LLSP+ ++++DKKLE D+    
Sbjct: 627  PFRLWDSPSRDGSPDAVLKSAAKTFTGTPSILKKRNRDLLSPLSDRRVDKKLEIDM---- 682

Query: 74   YCTSTGIRSDFSSLDAIFDEIGT 6
               ++ +  DFS LD +FDE  T
Sbjct: 683  ---ASNLSKDFSCLDVMFDESET 702


>emb|CBI20887.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  167 bits (424), Expect = 1e-39
 Identities = 94/165 (56%), Positives = 114/165 (69%), Gaps = 4/165 (2%)
 Frame = -2

Query: 560 NNVEKVCLPMEPDQANDALNSELVENFSSVSLEADGIACSVNESTPVKTHQPDSEALFYE 381
           N ++   L  +P  A D++N   V++F S   +      S        T Q D  ALFYE
Sbjct: 372 NQLKNKDLQEQPGPAKDSVNLVPVDSFGSGPSDIMHTCPSREGKQLAHTEQQDEGALFYE 431

Query: 380 PPRFPSLELPFFSCDLIPSGSDLQQAYSPLGIRQL-MSSMNC-SNASIWDSPSRDDSPNL 207
           PPRFPSL++PFFSCDLI SGSD+QQ YSPLGIRQL MSSMNC +   +WDSPSRDDSP+ 
Sbjct: 432 PPRFPSLDIPFFSCDLIQSGSDMQQEYSPLGIRQLMMSSMNCLTPFRLWDSPSRDDSPDA 491

Query: 206 FLKSAAKSFICTPSILKKRQRELL--SPVQEQKIDKKLERDISQG 78
            LKSAAK+F  TPSILKKR R+LL  SP+ E++ DKKLE DI+QG
Sbjct: 492 VLKSAAKTFTGTPSILKKRHRDLLSPSPLSERRSDKKLESDINQG 536


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