BLASTX nr result

ID: Coptis21_contig00022568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022568
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFZ23146.1| hypothetical protein SINV_01108 [Solenopsis invicta]    59   2e-06
ref|XP_644032.1| hypothetical protein DDB_G0274557 [Dictyosteliu...    39   7e-06
dbj|BAD94515.1| peroxisome proliferator-activated receptor gamma...    57   9e-06

>gb|EFZ23146.1| hypothetical protein SINV_01108 [Solenopsis invicta]
          Length = 1484

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 39/117 (33%), Positives = 48/117 (41%), Gaps = 9/117 (7%)
 Frame = +1

Query: 64   LLPPAAPLHFQPQQP--------PSNSSRYHHSRXXXXXXXXXXXYHYSTIKSPHRSSSL 219
            L+PP   +H    Q         PS+S   HH             +H+   +SPH     
Sbjct: 704  LIPPHQQMHAVHHQSLSHPQHLQPSHSQMPHHQSPHIHQHQSPHTHHH---QSPHNP--- 757

Query: 220  FQPHHYHH-SPHRCQHSTNNSSAPTDHHSQPHPATSSRTTPHQSPLPVAPSPITTHQ 387
              PHH+HH SPH  Q S N+   P +HH  PH    S    HQSP     SP   HQ
Sbjct: 758  --PHHHHHQSPHNHQPSHNHHQTPHNHHQSPHSHHQSPHNHHQSPHNHHQSPHNHHQ 812


>ref|XP_644032.1| hypothetical protein DDB_G0274557 [Dictyostelium discoideum AX4]
           gi|74865845|sp|Q8MP30.1|Y7791_DICDI RecName:
           Full=Uncharacterized histidine-rich protein
           DDB_G0274557; Flags: Precursor
           gi|21240652|gb|AAM44363.1| hypothetical protein
           [Dictyostelium discoideum] gi|60472218|gb|EAL70171.1|
           hypothetical protein DDB_G0274557 [Dictyostelium
           discoideum AX4]
          Length = 233

 Score = 38.9 bits (89), Expect(2) = 7e-06
 Identities = 21/81 (25%), Positives = 27/81 (33%)
 Frame = +2

Query: 344 NHHFQLHHHRSQLTN*TKESPYXXXXXXXXXXXXXKTVGWQ*KPHRHPSVTTNQELHHSP 523
           +HH   HHH     +     P+                     PH HP +  N   H  P
Sbjct: 139 HHHHHHHHHHHHHHHHPHHHPHPHPH-----------------PHPHPHLHPNPHPHPHP 181

Query: 524 SPIVYPHCHHHSTSNLRSYSH 586
            P  +PH HHH   N   + H
Sbjct: 182 HPHPHPHPHHHPNPNPHPHPH 202



 Score = 37.7 bits (86), Expect(2) = 7e-06
 Identities = 17/72 (23%), Positives = 24/72 (33%)
 Frame = +1

Query: 97  PQQPPSNSSRYHHSRXXXXXXXXXXXYHYSTIKSPHRSSSLFQPHHYHHSPHRCQHSTNN 276
           P  P +N    H+             +H+      H        HH+HH PH   H  ++
Sbjct: 47  PHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHH 106

Query: 277 SSAPTDHHSQPH 312
              P  HH   H
Sbjct: 107 HHHPHHHHHHHH 118


>dbj|BAD94515.1| peroxisome proliferator-activated receptor gamma [Oncorhynchus
           keta]
          Length = 662

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 4/172 (2%)
 Frame = +1

Query: 67  LPPAAPLHFQPQQPPSNSSRYHHSRXXXXXXXXXXXYHYSTIKSPHRSSSLFQPHHYHHS 246
           LP     H  P    S++S +HHS            +H+S   SPH  S     HH H+S
Sbjct: 43  LPSLEYSHNSPHHH-SHNSPHHHSHNSFHHHSHNSPHHHSH-NSPHHHSHNSPHHHSHNS 100

Query: 247 PHRCQHST--NNSSAPTDHHSQPHPATSSRTTPHQSPLPVAPSPITTHQLNQRKPIYHSI 420
           PH   H++  ++S     HHS   P   S  +PH        S  + H  +   P +HS 
Sbjct: 101 PHHHSHNSPHHHSHNSLHHHSHNSPHHHSHNSPHHH------SHNSPHHHSHNSPRHHSH 154

Query: 421 FFSSS-DHLP*NSRLAIKT-SPSPICHHQPGAPPLTFTHRLPSLSSPFNFEP 570
             S S +H P  S     T + +  C+H P     +F H  P  S  FN  P
Sbjct: 155 NRSHSFNHSPYRSHSCNHTQTEATSCNHSPDRSH-SFNHS-PDRSXSFNHSP 204